RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 CELF1Q92879 486 aaKnown RBP26.51■■□□□ 1.83
CCDC7-201ENST00000277657 UPF3BQ9BZI7 483 aaKnown RBP26.51■■□□□ 1.83
CCDC7-201ENST00000277657 TNRC6CQ9HCJ0 1690 aaKnown RBP26.51■■□□□ 1.83
CCDC7-201ENST00000277657 SNAP23O00161 211 aa26.51■■□□□ 1.83
CCDC7-201ENST00000277657 ZFYP08048 801 aaPredicted RBP26.51■■□□□ 1.83
CCDC7-201ENST00000277657 TM6SF1Q9BZW5 370 aa26.51■■□□□ 1.83
CCDC7-201ENST00000277657 HSP90AA1P07900 732 aaKnown RBP26.5■■□□□ 1.83
CCDC7-201ENST00000277657 KCNJ4P48050 445 aa26.5■■□□□ 1.83
CCDC7-201ENST00000277657 NBR1Q14596 966 aa26.5■■□□□ 1.83
CCDC7-201ENST00000277657 MYH7P12883 1935 aa26.5■■□□□ 1.83
CCDC7-201ENST00000277657 SLC27A2O14975 620 aa26.49■■□□□ 1.83
CCDC7-201ENST00000277657 APBA3O96018 575 aa26.49■■□□□ 1.83
CCDC7-201ENST00000277657 ZKSCAN1P17029 563 aaPredicted RBP26.49■■□□□ 1.83
CCDC7-201ENST00000277657 TM4SF1P30408 202 aa26.49■■□□□ 1.83
CCDC7-201ENST00000277657 SLFNL1Q499Z3 407 aa26.49■■□□□ 1.83
CCDC7-201ENST00000277657 CCDC129Q6ZRS4 1044 aa26.49■■□□□ 1.83
CCDC7-201ENST00000277657 CCDC24Q8N4L8 307 aa26.49■■□□□ 1.83
CCDC7-201ENST00000277657 CIZ1Q9ULV3 898 aaPredicted RBP26.49■■□□□ 1.83
CCDC7-201ENST00000277657 MINPP1Q9UNW1 487 aa26.49■■□□□ 1.83
CCDC7-201ENST00000277657 RPS8P62241 208 aaKnown RBP26.49■■□□□ 1.83
CCDC7-201ENST00000277657 ILDR2Q71H61 639 aa26.49■■□□□ 1.83
CCDC7-201ENST00000277657 CNBD1Q8NA66 436 aa26.49■■□□□ 1.83
CCDC7-201ENST00000277657 CYP2E1P05181 493 aaPredicted RBP26.48■■□□□ 1.83
CCDC7-201ENST00000277657 TTF1Q15361 905 aaPredicted RBP26.48■■□□□ 1.83
CCDC7-201ENST00000277657 NFKBIBQ15653 356 aa26.48■■□□□ 1.83
CCDC7-201ENST00000277657 RNF20Q5VTR2 975 aa26.48■■□□□ 1.83
CCDC7-201ENST00000277657 TTC14Q96N46 770 aa26.48■■□□□ 1.83
CCDC7-201ENST00000277657 MAST3O60307 1309 aa26.47■■□□□ 1.83
CCDC7-201ENST00000277657 TSGA10IPQ3SY00 556 aa26.47■■□□□ 1.83
CCDC7-201ENST00000277657 TNS1Q9HBL0 1735 aaKnown RBP26.47■■□□□ 1.83
CCDC7-201ENST00000277657 HMG20BQ9P0W2 317 aa26.47■■□□□ 1.83
CCDC7-201ENST00000277657 AKT1S1Q96B36 256 aa26.47■■□□□ 1.83
CCDC7-201ENST00000277657 U3KPZ7 1027 aaPredicted RBP26.47■■□□□ 1.83
CCDC7-201ENST00000277657 NPHP1O15259 732 aa26.46■■□□□ 1.83
CCDC7-201ENST00000277657 UBE4AQ14139 1066 aa26.46■■□□□ 1.83
CCDC7-201ENST00000277657 ADCK5Q3MIX3 580 aa26.46■■□□□ 1.83
CCDC7-201ENST00000277657 PRR5LQ6MZQ0 368 aa26.46■■□□□ 1.83
CCDC7-201ENST00000277657 TMX3Q96JJ7 454 aa26.46■■□□□ 1.83
CCDC7-201ENST00000277657 ZSWIM6Q9HCJ5 1215 aa26.46■■□□□ 1.83
CCDC7-201ENST00000277657 RPAP1Q9BWH6 1393 aaPredicted RBP26.46■■□□□ 1.83
CCDC7-201ENST00000277657 ZNF827Q17R98 1081 aa26.45■■□□□ 1.83
CCDC7-201ENST00000277657 POTEAQ6S8J7 498 aa26.45■■□□□ 1.83
CCDC7-201ENST00000277657 OSBP2Q969R2 916 aa26.45■■□□□ 1.83
CCDC7-201ENST00000277657 DSCC1Q9BVC3 393 aa26.45■■□□□ 1.83
CCDC7-201ENST00000277657 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.45■■□□□ 1.83
CCDC7-201ENST00000277657 RGPD3A6NKT7 1758 aaPredicted RBP26.45■■□□□ 1.82
CCDC7-201ENST00000277657 RGPD4Q7Z3J3 1758 aa26.45■■□□□ 1.82
CCDC7-201ENST00000277657 RASGRF1Q13972 1273 aa26.45■■□□□ 1.82
CCDC7-201ENST00000277657 SPATA5Q8NB90 893 aa26.45■■□□□ 1.82
CCDC7-201ENST00000277657 JAKMIP1Q96N16 626 aaKnown RBP26.45■■□□□ 1.82
CCDC7-201ENST00000277657 CASTP20810 708 aaKnown RBP26.44■■□□□ 1.82
CCDC7-201ENST00000277657 PIH1D3Q9NQM4 214 aaKnown RBP26.44■■□□□ 1.82
CCDC7-201ENST00000277657 FOXD4L1Q9NU39 408 aa26.44■■□□□ 1.82
CCDC7-201ENST00000277657 M0R2C6 588 aa26.43■■□□□ 1.82
CCDC7-201ENST00000277657 BCAMP50895 628 aa26.43■■□□□ 1.82
CCDC7-201ENST00000277657 ZSCAN25Q6NSZ9 544 aa26.43■■□□□ 1.82
CCDC7-201ENST00000277657 APPBP2Q92624 585 aa26.43■■□□□ 1.82
CCDC7-201ENST00000277657 ZNF804BA4D1E1 1349 aa26.43■■□□□ 1.82
CCDC7-201ENST00000277657 MYO5AQ9Y4I1 1855 aaKnown RBP26.43■■□□□ 1.82
CCDC7-201ENST00000277657 SERPINB2P05120 415 aa26.42■■□□□ 1.82
CCDC7-201ENST00000277657 CUL4AQ13619 759 aa26.42■■□□□ 1.82
CCDC7-201ENST00000277657 DOCK2Q92608 1830 aa26.42■■□□□ 1.82
CCDC7-201ENST00000277657 ADD2P35612 726 aa26.42■■□□□ 1.82
CCDC7-201ENST00000277657 TFCP2L1Q9NZI6 479 aa26.42■■□□□ 1.82
CCDC7-201ENST00000277657 PSMA5P28066 241 aa26.41■■□□□ 1.82
CCDC7-201ENST00000277657 VPS53Q5VIR6 699 aa26.41■■□□□ 1.82
CCDC7-201ENST00000277657 RUFY3Q7L099 469 aa26.41■■□□□ 1.82
CCDC7-201ENST00000277657 CYP46A1Q9Y6A2 500 aa26.41■■□□□ 1.82
CCDC7-201ENST00000277657 HSPD1P10809 573 aaKnown RBP26.4■■□□□ 1.82
CCDC7-201ENST00000277657 DDR1Q08345 913 aa26.4■■□□□ 1.82
CCDC7-201ENST00000277657 ANKRD2Q9GZV1 360 aa26.4■■□□□ 1.82
CCDC7-201ENST00000277657 TAF6LQ9Y6J9 622 aa26.4■■□□□ 1.82
CCDC7-201ENST00000277657 SOCS7O14512 581 aa26.4■■□□□ 1.82
CCDC7-201ENST00000277657 UBE3CQ15386 1083 aa26.4■■□□□ 1.82
CCDC7-201ENST00000277657 WASHC4Q2M389 1173 aa26.4■■□□□ 1.82
CCDC7-201ENST00000277657 CRY2Q49AN0 593 aa26.4■■□□□ 1.82
CCDC7-201ENST00000277657 CWC22Q9HCG8 908 aaKnown RBP26.4■■□□□ 1.82
CCDC7-201ENST00000277657 POLRMTO00411 1230 aaKnown RBP26.39■■□□□ 1.82
CCDC7-201ENST00000277657 AK2P54819 239 aa26.39■■□□□ 1.82
CCDC7-201ENST00000277657 ST5P78524 1137 aa26.39■■□□□ 1.82
CCDC7-201ENST00000277657 WTIPA6NIX2 430 aaPredicted RBP26.38■■□□□ 1.81
CCDC7-201ENST00000277657 CPA1P15085 419 aa26.38■■□□□ 1.81
CCDC7-201ENST00000277657 GRAPQ13588 217 aa26.38■■□□□ 1.81
CCDC7-201ENST00000277657 KRT32Q14532 448 aa26.38■■□□□ 1.81
CCDC7-201ENST00000277657 SLC9C2Q5TAH2 1124 aa26.38■■□□□ 1.81
CCDC7-201ENST00000277657 GRAPLQ8TC17 118 aaPredicted RBP26.38■■□□□ 1.81
CCDC7-201ENST00000277657 PUS7LQ9H0K6 701 aaKnown RBP26.38■■□□□ 1.81
CCDC7-201ENST00000277657 FRAT2O75474 233 aaPredicted RBP26.38■■□□□ 1.81
CCDC7-201ENST00000277657 CYP21A2P08686 494 aa26.38■■□□□ 1.81
CCDC7-201ENST00000277657 INTS4Q96HW7 963 aaKnown RBP26.38■■□□□ 1.81
CCDC7-201ENST00000277657 PDRG1Q9NUG6 133 aa26.38■■□□□ 1.81
CCDC7-201ENST00000277657 IDH1O75874 414 aaKnown RBP26.37■■□□□ 1.81
CCDC7-201ENST00000277657 COL23A1Q86Y22 540 aaPredicted RBP26.37■■□□□ 1.81
CCDC7-201ENST00000277657 FLAD1Q8NFF5 587 aa26.37■■□□□ 1.81
CCDC7-201ENST00000277657 TCRBV5S4A2TA0A5A2 114 aa26.36■■□□□ 1.81
CCDC7-201ENST00000277657 PDE6AP16499 860 aa26.36■■□□□ 1.81
CCDC7-201ENST00000277657 RAB3GAP1Q15042 981 aa26.36■■□□□ 1.81
CCDC7-201ENST00000277657 ZGPATQ8N5A5 531 aaKnown RBP26.36■■□□□ 1.81
CCDC7-201ENST00000277657 FOXP2O15409 715 aa26.36■■□□□ 1.81
CCDC7-201ENST00000277657 GYG1P46976 350 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms