RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 HOMEZQ8IX15 550 aa20.37■□□□□ 0.85
ITGA6-201ENST00000264107 ARHGEF2Q92974 986 aaKnown RBP20.37■□□□□ 0.85
ITGA6-201ENST00000264107 MED4Q9NPJ6 270 aa20.37■□□□□ 0.85
ITGA6-201ENST00000264107 PPANQ9NQ55 473 aaKnown RBP20.37■□□□□ 0.85
ITGA6-201ENST00000264107 SPTLC2O15270 562 aa20.36■□□□□ 0.85
ITGA6-201ENST00000264107 ARHGAP6O43182 974 aa20.36■□□□□ 0.85
ITGA6-201ENST00000264107 GRIPAP1Q4V328 841 aa20.36■□□□□ 0.85
ITGA6-201ENST00000264107 SPTY2D1Q68D10 685 aaPredicted RBP20.36■□□□□ 0.85
ITGA6-201ENST00000264107 SLC12A7Q9Y666 1083 aa20.36■□□□□ 0.85
ITGA6-201ENST00000264107 PDE1AP54750 535 aa20.36■□□□□ 0.85
ITGA6-201ENST00000264107 E2F5Q15329 346 aa20.36■□□□□ 0.85
ITGA6-201ENST00000264107 APBB1IPQ7Z5R6 666 aaPredicted RBP20.36■□□□□ 0.85
ITGA6-201ENST00000264107 GDAP1L1Q96MZ0 367 aa20.36■□□□□ 0.85
ITGA6-201ENST00000264107 TOP2BQ02880 1626 aa20.36■□□□□ 0.85
ITGA6-201ENST00000264107 HIP1RO75146 1068 aa20.36■□□□□ 0.85
ITGA6-201ENST00000264107 CTNNA2P26232 953 aa20.36■□□□□ 0.85
ITGA6-201ENST00000264107 FAM69CQ0P6D2 419 aa20.36■□□□□ 0.85
ITGA6-201ENST00000264107 RUFY4Q6ZNE9 571 aa20.36■□□□□ 0.85
ITGA6-201ENST00000264107 RABGAP1Q9Y3P9 1069 aa20.36■□□□□ 0.85
ITGA6-201ENST00000264107 CCDC8Q9H0W5 538 aaPredicted RBP20.35■□□□□ 0.85
ITGA6-201ENST00000264107 NKIRAS1Q9NYS0 192 aa20.35■□□□□ 0.85
ITGA6-201ENST00000264107 IARSP41252 1262 aaKnown RBP20.35■□□□□ 0.85
ITGA6-201ENST00000264107 F6X3S4 739 aa20.35■□□□□ 0.85
ITGA6-201ENST00000264107 TEX2Q8IWB9 1127 aa20.35■□□□□ 0.85
ITGA6-201ENST00000264107 IFT20Q8IY31 132 aa20.35■□□□□ 0.85
ITGA6-201ENST00000264107 ECHDC1Q9NTX5 307 aa20.35■□□□□ 0.85
ITGA6-201ENST00000264107 CASQ2O14958 399 aaPredicted RBP20.35■□□□□ 0.85
ITGA6-201ENST00000264107 FANCCQ00597 558 aa20.35■□□□□ 0.85
ITGA6-201ENST00000264107 ANKRD36BQ8N2N9 1353 aa20.35■□□□□ 0.85
ITGA6-201ENST00000264107 MTRF1LQ9UGC7 380 aaKnown RBP20.35■□□□□ 0.85
ITGA6-201ENST00000264107 SEC31AO94979 1220 aaKnown RBP20.34■□□□□ 0.85
ITGA6-201ENST00000264107 UBXN1Q04323 297 aa20.34■□□□□ 0.85
ITGA6-201ENST00000264107 EFCAB5A4FU69 1503 aa20.34■□□□□ 0.85
ITGA6-201ENST00000264107 TMEM132AQ24JP5 1023 aa20.34■□□□□ 0.85
ITGA6-201ENST00000264107 RASIP1Q5U651 963 aa20.34■□□□□ 0.85
ITGA6-201ENST00000264107 KIAA1524Q8TCG1 905 aa20.34■□□□□ 0.85
ITGA6-201ENST00000264107 RAD51AP2Q09MP3 1159 aa20.34■□□□□ 0.85
ITGA6-201ENST00000264107 SF3A3Q12874 501 aaKnown RBP eCLIP20.34■□□□□ 0.85
ITGA6-201ENST00000264107 UBA5Q9GZZ9 404 aa20.34■□□□□ 0.85
ITGA6-201ENST00000264107 EXOC4Q96A65 974 aa20.34■□□□□ 0.85
ITGA6-201ENST00000264107 TSGA10Q9BZW7 698 aa20.34■□□□□ 0.85
ITGA6-201ENST00000264107 STAG1Q8WVM7 1258 aa20.33■□□□□ 0.85
ITGA6-201ENST00000264107 FAM204AQ9H8W3 233 aa20.33■□□□□ 0.85
ITGA6-201ENST00000264107 ANAPC4Q9UJX5 808 aa20.33■□□□□ 0.85
ITGA6-201ENST00000264107 STX17P56962 302 aa20.33■□□□□ 0.85
ITGA6-201ENST00000264107 ARHGAP5Q13017 1502 aa20.33■□□□□ 0.84
ITGA6-201ENST00000264107 SYNJ2O15056 1496 aa20.33■□□□□ 0.84
ITGA6-201ENST00000264107 PHLDB2Q86SQ0 1253 aa20.33■□□□□ 0.84
ITGA6-201ENST00000264107 C16orf71Q8IYS4 520 aaPredicted RBP20.33■□□□□ 0.84
ITGA6-201ENST00000264107 MCUR1Q96AQ8 359 aa20.33■□□□□ 0.84
ITGA6-201ENST00000264107 AMPD3Q01432 767 aa20.33■□□□□ 0.84
ITGA6-201ENST00000264107 CLTAP09496 248 aa20.32■□□□□ 0.84
ITGA6-201ENST00000264107 TCERG1LQ5VWI1 586 aa20.32■□□□□ 0.84
ITGA6-201ENST00000264107 AIDAQ96BJ3 306 aa20.32■□□□□ 0.84
ITGA6-201ENST00000264107 MRFAP1Q9Y605 127 aa20.32■□□□□ 0.84
ITGA6-201ENST00000264107 ERBB4Q15303 1308 aa20.32■□□□□ 0.84
ITGA6-201ENST00000264107 NSD3Q9BZ95 1437 aa20.32■□□□□ 0.84
ITGA6-201ENST00000264107 ZNF213O14771 459 aa20.32■□□□□ 0.84
ITGA6-201ENST00000264107 CEP126Q9P2H0 1117 aa20.32■□□□□ 0.84
ITGA6-201ENST00000264107 PRG4Q92954 1404 aaPredicted RBP20.32■□□□□ 0.84
ITGA6-201ENST00000264107 GOLGA8KD6RF30 607 aa20.32■□□□□ 0.84
ITGA6-201ENST00000264107 CCDC25Q86WR0 208 aa20.32■□□□□ 0.84
ITGA6-201ENST00000264107 NUTM2AQ8IVF1 878 aaPredicted RBP20.32■□□□□ 0.84
ITGA6-201ENST00000264107 DESP17661 470 aa20.31■□□□□ 0.84
ITGA6-201ENST00000264107 IGSF22Q8N9C0 903 aa20.31■□□□□ 0.84
ITGA6-201ENST00000264107 CCDC110Q8TBZ0 833 aa20.31■□□□□ 0.84
ITGA6-201ENST00000264107 LMBR1Q8WVP7 490 aa20.31■□□□□ 0.84
ITGA6-201ENST00000264107 USH1CQ9Y6N9 552 aa20.31■□□□□ 0.84
ITGA6-201ENST00000264107 FERP16591 822 aa20.31■□□□□ 0.84
ITGA6-201ENST00000264107 PLVAPQ9BX97 442 aa20.31■□□□□ 0.84
ITGA6-201ENST00000264107 TOPBP1Q92547 1522 aa20.31■□□□□ 0.84
ITGA6-201ENST00000264107 IDH1O75874 414 aaKnown RBP20.31■□□□□ 0.84
ITGA6-201ENST00000264107 LRRC45Q96CN5 670 aa20.31■□□□□ 0.84
ITGA6-201ENST00000264107 SPAG5Q96R06 1193 aa20.31■□□□□ 0.84
ITGA6-201ENST00000264107 ZNF131P52739 623 aa20.3■□□□□ 0.84
ITGA6-201ENST00000264107 TNNQ9UQP3 1299 aa20.3■□□□□ 0.84
ITGA6-201ENST00000264107 RBM8AQ9Y5S9 174 aaKnown RBP20.3■□□□□ 0.84
ITGA6-201ENST00000264107 ATP1A2P50993 1020 aa20.3■□□□□ 0.84
ITGA6-201ENST00000264107 ETF1P62495 437 aaKnown RBP20.3■□□□□ 0.84
ITGA6-201ENST00000264107 MMRN2Q9H8L6 949 aa20.3■□□□□ 0.84
ITGA6-201ENST00000264107 TXNDC9O14530 226 aa20.3■□□□□ 0.84
ITGA6-201ENST00000264107 ATP5DP30049 168 aa20.3■□□□□ 0.84
ITGA6-201ENST00000264107 TRIM6Q9C030 488 aaPredicted RBP20.3■□□□□ 0.84
ITGA6-201ENST00000264107 GKAP1Q5VSY0 366 aaPredicted RBP20.29■□□□□ 0.84
ITGA6-201ENST00000264107 CCDC144CPQ8IYA2 1237 aa20.29■□□□□ 0.84
ITGA6-201ENST00000264107 LRRC2Q9BYS8 371 aa20.29■□□□□ 0.84
ITGA6-201ENST00000264107 PLEKHA4Q9H4M7 779 aa20.29■□□□□ 0.84
ITGA6-201ENST00000264107 ZBTB17Q13105 803 aa20.29■□□□□ 0.84
ITGA6-201ENST00000264107 PRPHP41219 470 aa20.29■□□□□ 0.84
ITGA6-201ENST00000264107 UBA7P41226 1012 aa20.29■□□□□ 0.84
ITGA6-201ENST00000264107 COG7P83436 770 aa20.29■□□□□ 0.84
ITGA6-201ENST00000264107 RAPGEF4Q8WZA2 1011 aa20.29■□□□□ 0.84
ITGA6-201ENST00000264107 DDX23Q9BUQ8 820 aaKnown RBP20.29■□□□□ 0.84
ITGA6-201ENST00000264107 EXOC1Q9NV70 894 aa20.29■□□□□ 0.84
ITGA6-201ENST00000264107 PAK2Q13177 524 aa20.29■□□□□ 0.84
ITGA6-201ENST00000264107 LRRC8AQ8IWT6 810 aa20.29■□□□□ 0.84
ITGA6-201ENST00000264107 NCAPGQ9BPX3 1015 aa20.29■□□□□ 0.84
ITGA6-201ENST00000264107 A0A1B0GVL5 298 aa20.28■□□□□ 0.84
ITGA6-201ENST00000264107 METAP2P50579 478 aaKnown RBP eCLIP20.28■□□□□ 0.84
ITGA6-201ENST00000264107 FBXO18Q8NFZ0 1043 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms