RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 KIF2CQ99661 725 aa27.69■■■□□ 2.02
SMARCB1-201ENST00000263121 ANO2Q9NQ90 1003 aa27.69■■■□□ 2.02
SMARCB1-201ENST00000263121 ANTXR1Q9H6X2 564 aa27.68■■■□□ 2.02
SMARCB1-201ENST00000263121 ZAP70P43403 619 aa27.68■■■□□ 2.02
SMARCB1-201ENST00000263121 FKBP4Q02790 459 aaKnown RBP eCLIP27.68■■■□□ 2.02
SMARCB1-201ENST00000263121 CRAMP1Q96RY5 1269 aa27.68■■■□□ 2.02
SMARCB1-201ENST00000263121 A0A0D9SFI3 127 aa27.67■■■□□ 2.02
SMARCB1-201ENST00000263121 PI16Q6UXB8 463 aa27.67■■■□□ 2.02
SMARCB1-201ENST00000263121 LSG1Q9H089 658 aaKnown RBP27.66■■■□□ 2.02
SMARCB1-201ENST00000263121 MED23Q9ULK4 1368 aa27.66■■■□□ 2.02
SMARCB1-201ENST00000263121 ZNF804BA4D1E1 1349 aa27.65■■■□□ 2.02
SMARCB1-201ENST00000263121 WTIPA6NIX2 430 aaPredicted RBP27.65■■■□□ 2.02
SMARCB1-201ENST00000263121 BCAMP50895 628 aa27.65■■■□□ 2.02
SMARCB1-201ENST00000263121 COL11A2P13942 1736 aaPredicted RBP27.64■■■□□ 2.02
SMARCB1-201ENST00000263121 HMG20BQ9P0W2 317 aa27.64■■■□□ 2.02
SMARCB1-201ENST00000263121 BBOX1O75936 387 aa27.63■■■□□ 2.01
SMARCB1-201ENST00000263121 PDE6BP35913 854 aa27.63■■■□□ 2.01
SMARCB1-201ENST00000263121 LRRC37AA6NMS7 1700 aa27.63■■■□□ 2.01
SMARCB1-201ENST00000263121 SRGNP10124 158 aa27.62■■■□□ 2.01
SMARCB1-201ENST00000263121 RASGRF1Q13972 1273 aa27.62■■■□□ 2.01
SMARCB1-201ENST00000263121 KIAA1211Q6ZU35 1233 aa27.62■■■□□ 2.01
SMARCB1-201ENST00000263121 PDGFDQ9GZP0 370 aaPredicted RBP27.62■■■□□ 2.01
SMARCB1-201ENST00000263121 CHGBP05060 677 aa27.62■■■□□ 2.01
SMARCB1-201ENST00000263121 CYP2E1P05181 493 aaPredicted RBP27.62■■■□□ 2.01
SMARCB1-201ENST00000263121 KCNJ4P48050 445 aa27.62■■■□□ 2.01
SMARCB1-201ENST00000263121 SPATA5Q8NB90 893 aa27.62■■■□□ 2.01
SMARCB1-201ENST00000263121 NPR1P16066 1061 aa27.61■■■□□ 2.01
SMARCB1-201ENST00000263121 TTF1Q15361 905 aaPredicted RBP27.61■■■□□ 2.01
SMARCB1-201ENST00000263121 SLC51AQ86UW1 340 aa27.61■■■□□ 2.01
SMARCB1-201ENST00000263121 IRS2Q9Y4H2 1338 aa27.61■■■□□ 2.01
SMARCB1-201ENST00000263121 MYH7P12883 1935 aa27.6■■■□□ 2.01
SMARCB1-201ENST00000263121 RNF113AO15541 343 aaKnown RBP27.6■■■□□ 2.01
SMARCB1-201ENST00000263121 MCCP23508 829 aa27.6■■■□□ 2.01
SMARCB1-201ENST00000263121 GYG1P46976 350 aa27.6■■■□□ 2.01
SMARCB1-201ENST00000263121 LRRFIP1Q32MZ4 808 aaKnown RBP27.6■■■□□ 2.01
SMARCB1-201ENST00000263121 ZMYM1Q5SVZ6 1142 aa27.6■■■□□ 2.01
SMARCB1-201ENST00000263121 LEMD3Q9Y2U8 911 aa27.6■■■□□ 2.01
SMARCB1-201ENST00000263121 XDHP47989 1333 aa27.6■■■□□ 2.01
SMARCB1-201ENST00000263121 CAVIN4Q5BKX8 364 aa27.59■■■□□ 2.01
SMARCB1-201ENST00000263121 TMC4Q7Z404 712 aa27.59■■■□□ 2.01
SMARCB1-201ENST00000263121 FBXO33Q7Z6M2 555 aa27.59■■■□□ 2.01
SMARCB1-201ENST00000263121 ZNF589Q86UQ0 364 aaPredicted RBP27.59■■■□□ 2.01
SMARCB1-201ENST00000263121 FAM84BQ96KN1 310 aaPredicted RBP27.59■■■□□ 2.01
SMARCB1-201ENST00000263121 HELLSQ9NRZ9 838 aa27.59■■■□□ 2.01
SMARCB1-201ENST00000263121 CCDC171Q6TFL3 1326 aa27.59■■■□□ 2.01
SMARCB1-201ENST00000263121 DOCK2Q92608 1830 aa27.59■■■□□ 2.01
SMARCB1-201ENST00000263121 ZFYP08048 801 aaPredicted RBP27.59■■■□□ 2.01
SMARCB1-201ENST00000263121 HSPA4P34932 840 aa27.59■■■□□ 2.01
SMARCB1-201ENST00000263121 PTH1RQ03431 593 aa27.59■■■□□ 2.01
SMARCB1-201ENST00000263121 MCMDC2Q4G0Z9 681 aa27.59■■■□□ 2.01
SMARCB1-201ENST00000263121 SLC16A10Q8TF71 515 aa27.59■■■□□ 2.01
SMARCB1-201ENST00000263121 IL17RAQ96F46 866 aa27.59■■■□□ 2.01
SMARCB1-201ENST00000263121 PIH1D3Q9NQM4 214 aaKnown RBP27.59■■■□□ 2.01
SMARCB1-201ENST00000263121 KLRK1P26718 216 aa27.58■■■□□ 2.01
SMARCB1-201ENST00000263121 GNL3LQ9NVN8 582 aaKnown RBP27.58■■■□□ 2.01
SMARCB1-201ENST00000263121 ANKIB1Q9P2G1 1089 aa27.58■■■□□ 2.01
SMARCB1-201ENST00000263121 ANAPC15P60006 121 aa27.57■■■□□ 2
SMARCB1-201ENST00000263121 SEC62Q99442 399 aaKnown RBP27.57■■■□□ 2
SMARCB1-201ENST00000263121 ZBTB22O15209 634 aa27.56■■■□□ 2
SMARCB1-201ENST00000263121 GPSM2P81274 684 aa27.56■■■□□ 2
SMARCB1-201ENST00000263121 LTBP1Q14766 1721 aa27.56■■■□□ 2
SMARCB1-201ENST00000263121 MYO5AQ9Y4I1 1855 aaKnown RBP27.56■■■□□ 2
SMARCB1-201ENST00000263121 PPEF1O14829 653 aaPredicted RBP27.56■■■□□ 2
SMARCB1-201ENST00000263121 RABEP1Q15276 862 aa27.56■■■□□ 2
SMARCB1-201ENST00000263121 SLFNL1Q499Z3 407 aa27.56■■■□□ 2
SMARCB1-201ENST00000263121 MASTLQ96GX5 879 aa27.56■■■□□ 2
SMARCB1-201ENST00000263121 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.56■■■□□ 2
SMARCB1-201ENST00000263121 PALD1Q9ULE6 856 aa27.56■■■□□ 2
SMARCB1-201ENST00000263121 COL1A1P02452 1464 aaPredicted RBP27.55■■■□□ 2
SMARCB1-201ENST00000263121 ALDH1B1P30837 517 aa27.55■■■□□ 2
SMARCB1-201ENST00000263121 BECN1Q14457 450 aa27.55■■■□□ 2
SMARCB1-201ENST00000263121 C15orf52Q6ZUT6 534 aaKnown RBP27.55■■■□□ 2
SMARCB1-201ENST00000263121 MAP4K1Q92918 833 aa27.55■■■□□ 2
SMARCB1-201ENST00000263121 PODXL2Q9NZ53 605 aa27.55■■■□□ 2
SMARCB1-201ENST00000263121 ZSCAN25Q6NSZ9 544 aa27.54■■■□□ 2
SMARCB1-201ENST00000263121 VPS37DQ86XT2 251 aa27.54■■■□□ 2
SMARCB1-201ENST00000263121 SP8Q8IXZ3 490 aa27.54■■■□□ 2
SMARCB1-201ENST00000263121 MAST3O60307 1309 aa27.53■■■□□ 2
SMARCB1-201ENST00000263121 SEMA3EO15041 775 aa27.53■■■□□ 2
SMARCB1-201ENST00000263121 HIBADHP31937 336 aaKnown RBP27.53■■■□□ 2
SMARCB1-201ENST00000263121 SNX21Q969T3 373 aa27.53■■■□□ 2
SMARCB1-201ENST00000263121 TBC1D2Q9BYX2 928 aa27.53■■■□□ 2
SMARCB1-201ENST00000263121 ATP6V0A2Q9Y487 856 aa27.53■■■□□ 2
SMARCB1-201ENST00000263121 ATP2B4P23634 1241 aa27.52■■■□□ 2
SMARCB1-201ENST00000263121 ADD2P35612 726 aa27.52■■■□□ 2
SMARCB1-201ENST00000263121 CCDC129Q6ZRS4 1044 aa27.52■■■□□ 2
SMARCB1-201ENST00000263121 TXNRD3Q86VQ6 643 aa27.52■■■□□ 2
SMARCB1-201ENST00000263121 C2CD5Q86YS7 1000 aa27.52■■■□□ 2
SMARCB1-201ENST00000263121 APPBP2Q92624 585 aa27.52■■■□□ 2
SMARCB1-201ENST00000263121 PDS5AQ29RF7 1337 aaKnown RBP27.52■■■□□ 2
SMARCB1-201ENST00000263121 OSBP2Q969R2 916 aa27.52■■■□□ 2
SMARCB1-201ENST00000263121 DENND2AQ9ULE3 1009 aa27.52■■■□□ 2
SMARCB1-201ENST00000263121 NSFL1CQ9UNZ2 370 aaKnown RBP27.52■■■□□ 2
SMARCB1-201ENST00000263121 IQSEC3Q9UPP2 1182 aaPredicted RBP27.52■■■□□ 2
SMARCB1-201ENST00000263121 C10orf71Q711Q0 1435 aa27.52■■■□□ 2
SMARCB1-201ENST00000263121 IDH1O75874 414 aaKnown RBP27.51■■□□□ 1.99
SMARCB1-201ENST00000263121 NECTIN1Q15223 517 aa27.51■■□□□ 1.99
SMARCB1-201ENST00000263121 STYK1Q6J9G0 422 aa27.51■■□□□ 1.99
SMARCB1-201ENST00000263121 KCNB2Q92953 911 aa27.51■■□□□ 1.99
SMARCB1-201ENST00000263121 RBM8AQ9Y5S9 174 aaKnown RBP27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms