RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 SDF4Q9BRK5 362 aa16.42■□□□□ 0.22
SCARF1-201ENST00000263071 TCHHQ07283 1943 aa16.42■□□□□ 0.22
SCARF1-201ENST00000263071 POLR3DP05423 398 aaPredicted RBP16.42■□□□□ 0.22
SCARF1-201ENST00000263071 PSMA5P28066 241 aa16.42■□□□□ 0.22
SCARF1-201ENST00000263071 GSCP56915 257 aaPredicted RBP16.42■□□□□ 0.22
SCARF1-201ENST00000263071 ARHGAP29Q52LW3 1261 aa16.42■□□□□ 0.22
SCARF1-201ENST00000263071 Q6ZUG5 572 aa16.42■□□□□ 0.22
SCARF1-201ENST00000263071 EVI5LQ96CN4 794 aa16.42■□□□□ 0.22
SCARF1-201ENST00000263071 TMEM131LA2VDJ0 1609 aa16.42■□□□□ 0.22
SCARF1-201ENST00000263071 CCDC189A1A4V9 331 aa16.41■□□□□ 0.22
SCARF1-201ENST00000263071 GIMAP7Q8NHV1 300 aa16.41■□□□□ 0.22
SCARF1-201ENST00000263071 DBF4Q9UBU7 674 aaPredicted RBP16.41■□□□□ 0.22
SCARF1-201ENST00000263071 NEO1Q92859 1461 aa16.41■□□□□ 0.22
SCARF1-201ENST00000263071 PLEKHG2Q9H7P9 1386 aa16.41■□□□□ 0.22
SCARF1-201ENST00000263071 NEXNQ0ZGT2 675 aa16.41■□□□□ 0.22
SCARF1-201ENST00000263071 ST3GAL1Q11201 340 aa16.41■□□□□ 0.22
SCARF1-201ENST00000263071 VPS53Q5VIR6 699 aa16.41■□□□□ 0.22
SCARF1-201ENST00000263071 MRVI1Q9Y6F6 885 aa16.41■□□□□ 0.22
SCARF1-201ENST00000263071 PLEKHG3A1L390 1219 aa16.41■□□□□ 0.22
SCARF1-201ENST00000263071 USP27XA6NNY8 438 aa16.41■□□□□ 0.22
SCARF1-201ENST00000263071 ANKRD65E5RJM6 399 aa16.41■□□□□ 0.22
SCARF1-201ENST00000263071 TPM1P09493 284 aa16.41■□□□□ 0.22
SCARF1-201ENST00000263071 ACTN2P35609 894 aa16.41■□□□□ 0.22
SCARF1-201ENST00000263071 SWT1Q5T5J6 900 aaKnown RBP16.41■□□□□ 0.22
SCARF1-201ENST00000263071 KIF2AO00139 706 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-201ENST00000263071 ARID4AP29374 1257 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-201ENST00000263071 IGSF1Q8N6C5 1336 aa16.4■□□□□ 0.22
SCARF1-201ENST00000263071 APOBRQ0VD83 1088 aa16.4■□□□□ 0.22
SCARF1-201ENST00000263071 TSGA10IPQ3SY00 556 aa16.4■□□□□ 0.22
SCARF1-201ENST00000263071 ZSCAN31Q96LW9 406 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-201ENST00000263071 USP6P35125 1406 aa16.4■□□□□ 0.22
SCARF1-201ENST00000263071 SASH1O94885 1247 aa16.39■□□□□ 0.22
SCARF1-201ENST00000263071 SMC2O95347 1197 aa16.39■□□□□ 0.22
SCARF1-201ENST00000263071 COPS6Q7L5N1 327 aa16.39■□□□□ 0.22
SCARF1-201ENST00000263071 CEP89Q96ST8 783 aa16.39■□□□□ 0.22
SCARF1-201ENST00000263071 SBNO1A3KN83 1393 aa16.39■□□□□ 0.21
SCARF1-201ENST00000263071 GRM8O00222 908 aa16.39■□□□□ 0.21
SCARF1-201ENST00000263071 SUGP1Q8IWZ8 645 aaKnown RBP16.39■□□□□ 0.21
SCARF1-201ENST00000263071 LEO1Q8WVC0 666 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-201ENST00000263071 SH2B1Q9NRF2 756 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-201ENST00000263071 PPP6R1Q9UPN7 881 aa16.39■□□□□ 0.21
SCARF1-201ENST00000263071 MICALL1Q8N3F8 863 aa16.39■□□□□ 0.21
SCARF1-201ENST00000263071 XAGE3Q8WTP9 111 aa16.39■□□□□ 0.21
SCARF1-201ENST00000263071 CCDC34Q96HJ3 373 aa16.39■□□□□ 0.21
SCARF1-201ENST00000263071 PDCP20941 246 aa16.38■□□□□ 0.21
SCARF1-201ENST00000263071 FKBP4Q02790 459 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCARF1-201ENST00000263071 TFCP2Q12800 502 aa16.38■□□□□ 0.21
SCARF1-201ENST00000263071 UBXN4Q92575 508 aa16.38■□□□□ 0.21
SCARF1-201ENST00000263071 ZSWIM6Q9HCJ5 1215 aa16.38■□□□□ 0.21
SCARF1-201ENST00000263071 A0A0G2JLW4 131 aa16.38■□□□□ 0.21
SCARF1-201ENST00000263071 TIMM10P62072 90 aa16.38■□□□□ 0.21
SCARF1-201ENST00000263071 PLEKHO1Q53GL0 409 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-201ENST00000263071 ZSCAN25Q6NSZ9 544 aa16.38■□□□□ 0.21
SCARF1-201ENST00000263071 GJB4Q9NTQ9 266 aa16.38■□□□□ 0.21
SCARF1-201ENST00000263071 PREX1Q8TCU6 1659 aa16.38■□□□□ 0.21
SCARF1-201ENST00000263071 RIMS1Q86UR5 1692 aaKnown RBP16.37■□□□□ 0.21
SCARF1-201ENST00000263071 TNRQ92752 1358 aa16.37■□□□□ 0.21
SCARF1-201ENST00000263071 SMC1AQ14683 1233 aaKnown RBP16.37■□□□□ 0.21
SCARF1-201ENST00000263071 CCDC73Q6ZRK6 1079 aa16.37■□□□□ 0.21
SCARF1-201ENST00000263071 DBNDD2Q9BQY9 259 aa16.37■□□□□ 0.21
SCARF1-201ENST00000263071 CEP170BQ9Y4F5 1589 aaPredicted RBP16.37■□□□□ 0.21
SCARF1-201ENST00000263071 USP8P40818 1118 aa16.37■□□□□ 0.21
SCARF1-201ENST00000263071 SETQ01105 290 aaPredicted RBP16.37■□□□□ 0.21
SCARF1-201ENST00000263071 TRDNQ13061 729 aa16.37■□□□□ 0.21
SCARF1-201ENST00000263071 POLA2Q14181 598 aa16.37■□□□□ 0.21
SCARF1-201ENST00000263071 WASHC4Q2M389 1173 aa16.37■□□□□ 0.21
SCARF1-201ENST00000263071 NBPF9Q3BBW0 867 aa16.37■□□□□ 0.21
SCARF1-201ENST00000263071 EPHA10Q5JZY3 1008 aa16.37■□□□□ 0.21
SCARF1-201ENST00000263071 CCAR1Q8IX12 1150 aaKnown RBP16.37■□□□□ 0.21
SCARF1-201ENST00000263071 CACTINQ8WUQ7 758 aaKnown RBP16.37■□□□□ 0.21
SCARF1-201ENST00000263071 NEK1Q96PY6 1258 aa16.37■□□□□ 0.21
SCARF1-201ENST00000263071 NEBLO76041 1014 aa16.36■□□□□ 0.21
SCARF1-201ENST00000263071 H2AFXP16104 143 aaPredicted RBP16.36■□□□□ 0.21
SCARF1-201ENST00000263071 CCDC144BQ3MJ40 725 aa16.36■□□□□ 0.21
SCARF1-201ENST00000263071 CCDC144CPQ8IYA2 1237 aa16.36■□□□□ 0.21
SCARF1-201ENST00000263071 KINO60870 393 aaKnown RBP16.36■□□□□ 0.21
SCARF1-201ENST00000263071 DDX58O95786 925 aaKnown RBP16.36■□□□□ 0.21
SCARF1-201ENST00000263071 KSR2Q6VAB6 950 aa16.36■□□□□ 0.21
SCARF1-201ENST00000263071 GPHNQ9NQX3 736 aaPredicted RBP16.36■□□□□ 0.21
SCARF1-201ENST00000263071 PHF8Q9UPP1 1060 aa16.36■□□□□ 0.21
SCARF1-201ENST00000263071 NECTIN1Q15223 517 aa16.36■□□□□ 0.21
SCARF1-201ENST00000263071 DLG5Q8TDM6 1919 aa16.36■□□□□ 0.21
SCARF1-201ENST00000263071 A0A1B0GVL5 298 aa16.35■□□□□ 0.21
SCARF1-201ENST00000263071 C11orf57Q6ZUT1 292 aaPredicted RBP16.35■□□□□ 0.21
SCARF1-201ENST00000263071 DDX17Q92841 729 aaKnown RBP16.35■□□□□ 0.21
SCARF1-201ENST00000263071 SCAND2PQ9GZW5 306 aaPredicted RBP16.35■□□□□ 0.21
SCARF1-201ENST00000263071 HOMER1Q86YM7 354 aa16.35■□□□□ 0.21
SCARF1-201ENST00000263071 EXOC4Q96A65 974 aa16.35■□□□□ 0.21
SCARF1-201ENST00000263071 PGBD1Q96JS3 809 aa16.35■□□□□ 0.21
SCARF1-201ENST00000263071 ADAM21Q9UKJ8 722 aa16.35■□□□□ 0.21
SCARF1-201ENST00000263071 RXRAP19793 462 aa16.35■□□□□ 0.21
SCARF1-201ENST00000263071 SCP2P22307 547 aa16.35■□□□□ 0.21
SCARF1-201ENST00000263071 RPS6KB1P23443 525 aa16.35■□□□□ 0.21
SCARF1-201ENST00000263071 ERC1Q8IUD2 1116 aa16.35■□□□□ 0.21
SCARF1-201ENST00000263071 AOPEPQ8N6M6 819 aa16.35■□□□□ 0.21
SCARF1-201ENST00000263071 ARHGEF10O15013 1369 aa16.34■□□□□ 0.21
SCARF1-201ENST00000263071 SKILP12757 684 aa16.34■□□□□ 0.21
SCARF1-201ENST00000263071 SKIDA1Q1XH10 827 aa16.34■□□□□ 0.21
SCARF1-201ENST00000263071 FSIP1Q8NA03 581 aa16.34■□□□□ 0.21
SCARF1-201ENST00000263071 CABLES1Q8TDN4 633 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms