RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 PUM3Q15397 648 aaKnown RBP23.23■■□□□ 1.31
CYSTM1-201ENST00000261811 GJA3Q9Y6H8 435 aa23.23■■□□□ 1.31
CYSTM1-201ENST00000261811 IFIT1P09914 478 aaKnown RBP23.22■■□□□ 1.31
CYSTM1-201ENST00000261811 CAVIN4Q5BKX8 364 aa23.22■■□□□ 1.31
CYSTM1-201ENST00000261811 ATG9AQ7Z3C6 839 aa23.22■■□□□ 1.31
CYSTM1-201ENST00000261811 SUPT16HQ9Y5B9 1047 aaKnown RBP23.22■■□□□ 1.31
CYSTM1-201ENST00000261811 SCN9AQ15858 1988 aa23.21■■□□□ 1.31
CYSTM1-201ENST00000261811 ZNF541Q9H0D2 1346 aa23.21■■□□□ 1.31
CYSTM1-201ENST00000261811 IQCA1LA6NCM1 817 aa23.21■■□□□ 1.31
CYSTM1-201ENST00000261811 DDNO94850 711 aaPredicted RBP23.21■■□□□ 1.31
CYSTM1-201ENST00000261811 SLC5A1P13866 664 aa23.21■■□□□ 1.31
CYSTM1-201ENST00000261811 VPS37DQ86XT2 251 aa23.21■■□□□ 1.31
CYSTM1-201ENST00000261811 AKAP2Q9Y2D5 859 aa23.21■■□□□ 1.31
CYSTM1-201ENST00000261811 SURF6O75683 361 aaKnown RBP23.2■■□□□ 1.3
CYSTM1-201ENST00000261811 VEGFAP15692 232 aaPredicted RBP23.2■■□□□ 1.3
CYSTM1-201ENST00000261811 LMOD1P29536 600 aaPredicted RBP23.2■■□□□ 1.3
CYSTM1-201ENST00000261811 CXCL9Q07325 125 aa23.2■■□□□ 1.3
CYSTM1-201ENST00000261811 AAMPQ13685 434 aa23.2■■□□□ 1.3
CYSTM1-201ENST00000261811 HSP90AB4PQ58FF6 505 aa23.2■■□□□ 1.3
CYSTM1-201ENST00000261811 VGLL2Q8N8G2 317 aa23.2■■□□□ 1.3
CYSTM1-201ENST00000261811 LPIN2Q92539 896 aa23.2■■□□□ 1.3
CYSTM1-201ENST00000261811 RAD17O75943 681 aa23.19■■□□□ 1.3
CYSTM1-201ENST00000261811 C16orf71Q8IYS4 520 aaPredicted RBP23.19■■□□□ 1.3
CYSTM1-201ENST00000261811 WTIPA6NIX2 430 aaPredicted RBP23.18■■□□□ 1.3
CYSTM1-201ENST00000261811 L3MBTL3Q96JM7 780 aaPredicted RBP23.18■■□□□ 1.3
CYSTM1-201ENST00000261811 RRAGCQ9HB90 399 aa23.18■■□□□ 1.3
CYSTM1-201ENST00000261811 ARAP2Q8WZ64 1704 aa23.18■■□□□ 1.3
CYSTM1-201ENST00000261811 YDJCA8MPS7 323 aa23.17■■□□□ 1.3
CYSTM1-201ENST00000261811 SNAP23O00161 211 aa23.17■■□□□ 1.3
CYSTM1-201ENST00000261811 HIBADHP31937 336 aaKnown RBP23.17■■□□□ 1.3
CYSTM1-201ENST00000261811 ATP2B3Q16720 1220 aa23.17■■□□□ 1.3
CYSTM1-201ENST00000261811 TXNRD3Q86VQ6 643 aa23.17■■□□□ 1.3
CYSTM1-201ENST00000261811 ERC1Q8IUD2 1116 aa23.17■■□□□ 1.3
CYSTM1-201ENST00000261811 USP17L3A6NCW0 530 aa23.16■■□□□ 1.3
CYSTM1-201ENST00000261811 USP17L4A6NCW7 530 aa23.16■■□□□ 1.3
CYSTM1-201ENST00000261811 USP17L1Q7RTZ2 530 aa23.16■■□□□ 1.3
CYSTM1-201ENST00000261811 CRBNQ96SW2 442 aa23.16■■□□□ 1.3
CYSTM1-201ENST00000261811 CD209Q9NNX6 404 aa23.16■■□□□ 1.3
CYSTM1-201ENST00000261811 NOP58Q9Y2X3 529 aaKnown RBP23.16■■□□□ 1.3
CYSTM1-201ENST00000261811 RPS12P25398 132 aaKnown RBP23.15■■□□□ 1.3
CYSTM1-201ENST00000261811 KLRK1P26718 216 aa23.15■■□□□ 1.3
CYSTM1-201ENST00000261811 NMRK2Q9NPI5 230 aa23.15■■□□□ 1.3
CYSTM1-201ENST00000261811 HACL1Q9UJ83 578 aa23.15■■□□□ 1.3
CYSTM1-201ENST00000261811 PSMD14O00487 310 aa23.14■■□□□ 1.3
CYSTM1-201ENST00000261811 FRAT2O75474 233 aaPredicted RBP23.14■■□□□ 1.3
CYSTM1-201ENST00000261811 FGFR2P21802 821 aa23.14■■□□□ 1.3
CYSTM1-201ENST00000261811 TFCP2Q12800 502 aa23.14■■□□□ 1.3
CYSTM1-201ENST00000261811 FBXW7Q969H0 707 aa23.14■■□□□ 1.3
CYSTM1-201ENST00000261811 GNL3LQ9NVN8 582 aaKnown RBP23.14■■□□□ 1.3
CYSTM1-201ENST00000261811 IL1R1P14778 569 aa23.13■■□□□ 1.29
CYSTM1-201ENST00000261811 GYG1P46976 350 aa23.13■■□□□ 1.29
CYSTM1-201ENST00000261811 STRIP1Q5VSL9 837 aa23.13■■□□□ 1.29
CYSTM1-201ENST00000261811 TTLL5Q6EMB2 1281 aa23.13■■□□□ 1.29
CYSTM1-201ENST00000261811 MYO3BQ8WXR4 1341 aa23.13■■□□□ 1.29
CYSTM1-201ENST00000261811 IRS2Q9Y4H2 1338 aa23.13■■□□□ 1.29
CYSTM1-201ENST00000261811 VIL1P09327 827 aaKnown RBP23.12■■□□□ 1.29
CYSTM1-201ENST00000261811 DPF2Q92785 391 aa23.12■■□□□ 1.29
CYSTM1-201ENST00000261811 FAM84BQ96KN1 310 aaPredicted RBP23.12■■□□□ 1.29
CYSTM1-201ENST00000261811 H7C1D1 291 aa23.11■■□□□ 1.29
CYSTM1-201ENST00000261811 GMPSP49915 693 aaPredicted RBP23.11■■□□□ 1.29
CYSTM1-201ENST00000261811 FBXO33Q7Z6M2 555 aa23.11■■□□□ 1.29
CYSTM1-201ENST00000261811 AGBL3Q8NEM8 1001 aa23.11■■□□□ 1.29
CYSTM1-201ENST00000261811 NEUROD6Q96NK8 337 aa23.11■■□□□ 1.29
CYSTM1-201ENST00000261811 GPR108Q9NPR9 543 aa23.11■■□□□ 1.29
CYSTM1-201ENST00000261811 ZNF646O15015 1829 aaPredicted RBP23.11■■□□□ 1.29
CYSTM1-201ENST00000261811 A0A1B0GUL7 405 aa23.1■■□□□ 1.29
CYSTM1-201ENST00000261811 SASH1O94885 1247 aa23.1■■□□□ 1.29
CYSTM1-201ENST00000261811 GTF2IP78347 998 aa23.1■■□□□ 1.29
CYSTM1-201ENST00000261811 GORABQ5T7V8 394 aa23.1■■□□□ 1.29
CYSTM1-201ENST00000261811 RSBN1LQ6PCB5 846 aaPredicted RBP23.1■■□□□ 1.29
CYSTM1-201ENST00000261811 PNMA8AQ86V59 439 aaPredicted RBP23.1■■□□□ 1.29
CYSTM1-201ENST00000261811 KCNQ5Q9NR82 932 aa23.1■■□□□ 1.29
CYSTM1-201ENST00000261811 GPRC5DQ9NZD1 345 aa23.1■■□□□ 1.29
CYSTM1-201ENST00000261811 RAB11FIP3O75154 756 aa23.09■■□□□ 1.29
CYSTM1-201ENST00000261811 EPHX2P34913 555 aa23.09■■□□□ 1.29
CYSTM1-201ENST00000261811 MMP14P50281 582 aa23.09■■□□□ 1.29
CYSTM1-201ENST00000261811 TDRD7Q8NHU6 1098 aaKnown RBP23.09■■□□□ 1.29
CYSTM1-201ENST00000261811 EXOC6BQ9Y2D4 811 aa23.09■■□□□ 1.29
CYSTM1-201ENST00000261811 CENPBP07199 599 aaPredicted RBP23.08■■□□□ 1.29
CYSTM1-201ENST00000261811 SIRT2Q8IXJ6 389 aa23.08■■□□□ 1.29
CYSTM1-201ENST00000261811 CNOT7Q9UIV1 285 aaKnown RBP23.08■■□□□ 1.29
CYSTM1-201ENST00000261811 ZNF609O15014 1411 aa23.08■■□□□ 1.29
CYSTM1-201ENST00000261811 KIF3CO14782 793 aa23.08■■□□□ 1.28
CYSTM1-201ENST00000261811 TOMM70O94826 608 aa23.08■■□□□ 1.28
CYSTM1-201ENST00000261811 BCAMP50895 628 aa23.08■■□□□ 1.28
CYSTM1-201ENST00000261811 SCNN1DP51172 638 aa23.08■■□□□ 1.28
CYSTM1-201ENST00000261811 TIMM10P62072 90 aa23.08■■□□□ 1.28
CYSTM1-201ENST00000261811 OGFOD1Q8N543 542 aa23.08■■□□□ 1.28
CYSTM1-201ENST00000261811 KIF1BPQ96EK5 621 aa23.08■■□□□ 1.28
CYSTM1-201ENST00000261811 TAF1DQ9H5J8 278 aaPredicted RBP23.08■■□□□ 1.28
CYSTM1-201ENST00000261811 ADARB2Q9NS39 739 aaKnown RBP23.08■■□□□ 1.28
CYSTM1-201ENST00000261811 ZBTB12Q9Y330 459 aaPredicted RBP23.08■■□□□ 1.28
CYSTM1-201ENST00000261811 POTECB2RU33 542 aa23.07■■□□□ 1.28
CYSTM1-201ENST00000261811 FKBP1AP62942 108 aaKnown RBP23.07■■□□□ 1.28
CYSTM1-201ENST00000261811 DACT2Q5SW24 774 aa23.07■■□□□ 1.28
CYSTM1-201ENST00000261811 TBC1D22AQ8WUA7 517 aa23.07■■□□□ 1.28
CYSTM1-201ENST00000261811 HDAC9Q9UKV0 1011 aa23.07■■□□□ 1.28
CYSTM1-201ENST00000261811 FAM205AQ6ZU69 1335 aa23.06■■□□□ 1.28
CYSTM1-201ENST00000261811 SEMA3EO15041 775 aa23.06■■□□□ 1.28
CYSTM1-201ENST00000261811 TNNI3KQ59H18 835 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms