RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 MAGEB6Q8N7X4 407 aa17.34■□□□□ 0.37
UBE4B-201ENST00000253251 DNAJC5Q9H3Z4 198 aa17.34■□□□□ 0.37
UBE4B-201ENST00000253251 PPRC1Q5VV67 1664 aaKnown RBP17.34■□□□□ 0.37
UBE4B-201ENST00000253251 BEND3Q5T5X7 828 aa17.33■□□□□ 0.37
UBE4B-201ENST00000253251 KBTBD3Q8NAB2 608 aa17.33■□□□□ 0.37
UBE4B-201ENST00000253251 FEZ1Q99689 392 aa17.33■□□□□ 0.37
UBE4B-201ENST00000253251 LRRIQ1Q96JM4 1722 aa17.33■□□□□ 0.37
UBE4B-201ENST00000253251 CNNM3Q8NE01 707 aa17.33■□□□□ 0.37
UBE4B-201ENST00000253251 SPATA31A3Q5VYP0 1347 aa17.33■□□□□ 0.36
UBE4B-201ENST00000253251 CPSF1Q10570 1443 aaKnown RBP17.33■□□□□ 0.36
UBE4B-201ENST00000253251 PTCH1Q13635 1447 aa17.33■□□□□ 0.36
UBE4B-201ENST00000253251 HELBQ8NG08 1087 aaPredicted RBP17.33■□□□□ 0.36
UBE4B-201ENST00000253251 XAGE2Q96GT9 111 aa17.33■□□□□ 0.36
UBE4B-201ENST00000253251 MAST3O60307 1309 aa17.33■□□□□ 0.36
UBE4B-201ENST00000253251 PNMA6EA0A0J9YXQ4 647 aa17.33■□□□□ 0.36
UBE4B-201ENST00000253251 PCCAP05165 728 aaPredicted RBP17.33■□□□□ 0.36
UBE4B-201ENST00000253251 ALG1Q9BT22 464 aa17.33■□□□□ 0.36
UBE4B-201ENST00000253251 STX8Q9UNK0 236 aa17.33■□□□□ 0.36
UBE4B-201ENST00000253251 HIBADHP31937 336 aaKnown RBP17.32■□□□□ 0.36
UBE4B-201ENST00000253251 RDXP35241 583 aaKnown RBP17.32■□□□□ 0.36
UBE4B-201ENST00000253251 TSG101Q99816 390 aa17.32■□□□□ 0.36
UBE4B-201ENST00000253251 DBNDD2Q9BQY9 259 aa17.32■□□□□ 0.36
UBE4B-201ENST00000253251 ATP5JP18859 108 aa17.32■□□□□ 0.36
UBE4B-201ENST00000253251 WDR66Q8TBY9 1149 aa17.32■□□□□ 0.36
UBE4B-201ENST00000253251 TANGO6Q9C0B7 1094 aa17.32■□□□□ 0.36
UBE4B-201ENST00000253251 IQSEC3Q9UPP2 1182 aaPredicted RBP17.32■□□□□ 0.36
UBE4B-201ENST00000253251 CALML3P27482 149 aa17.32■□□□□ 0.36
UBE4B-201ENST00000253251 THRAP3Q9Y2W1 955 aaKnown RBP17.32■□□□□ 0.36
UBE4B-201ENST00000253251 ATL3Q6DD88 541 aa17.32■□□□□ 0.36
UBE4B-201ENST00000253251 CALML4Q96GE6 196 aa17.32■□□□□ 0.36
UBE4B-201ENST00000253251 SGSM2O43147 1006 aa17.31■□□□□ 0.36
UBE4B-201ENST00000253251 TTC6Q86TZ1 520 aa17.31■□□□□ 0.36
UBE4B-201ENST00000253251 SPC24Q8NBT2 197 aa17.31■□□□□ 0.36
UBE4B-201ENST00000253251 MYO6Q9UM54 1294 aa17.31■□□□□ 0.36
UBE4B-201ENST00000253251 MTERF4Q7Z6M4 381 aaKnown RBP17.31■□□□□ 0.36
UBE4B-201ENST00000253251 TMEM87BQ96K49 555 aa17.31■□□□□ 0.36
UBE4B-201ENST00000253251 HCLS1P14317 486 aaPredicted RBP17.31■□□□□ 0.36
UBE4B-201ENST00000253251 TIMM10P62072 90 aa17.31■□□□□ 0.36
UBE4B-201ENST00000253251 UVSSAQ2YD98 709 aa17.31■□□□□ 0.36
UBE4B-201ENST00000253251 KAT6BQ8WYB5 2073 aa17.3■□□□□ 0.36
UBE4B-201ENST00000253251 ZBTB38Q8NAP3 1195 aaPredicted RBP17.3■□□□□ 0.36
UBE4B-201ENST00000253251 ERCC4Q92889 916 aaPredicted RBP17.3■□□□□ 0.36
UBE4B-201ENST00000253251 AK2P54819 239 aa17.3■□□□□ 0.36
UBE4B-201ENST00000253251 STX1AQ16623 288 aa17.3■□□□□ 0.36
UBE4B-201ENST00000253251 CCDC102BQ68D86 513 aa17.3■□□□□ 0.36
UBE4B-201ENST00000253251 DEF6Q9H4E7 631 aa17.3■□□□□ 0.36
UBE4B-201ENST00000253251 TRPC5Q9UL62 973 aaPredicted RBP17.3■□□□□ 0.36
UBE4B-201ENST00000253251 SSH2Q76I76 1423 aa17.3■□□□□ 0.36
UBE4B-201ENST00000253251 KCNQ3O43525 872 aa17.29■□□□□ 0.36
UBE4B-201ENST00000253251 IL6STP40189 918 aaPredicted RBP17.29■□□□□ 0.36
UBE4B-201ENST00000253251 CDR1P51861 262 aa17.29■□□□□ 0.36
UBE4B-201ENST00000253251 NECAB1Q8N987 351 aa17.29■□□□□ 0.36
UBE4B-201ENST00000253251 LARP6Q9BRS8 491 aaKnown RBP17.29■□□□□ 0.36
UBE4B-201ENST00000253251 RBM28Q9NW13 759 aaKnown RBP17.29■□□□□ 0.36
UBE4B-201ENST00000253251 GGA1Q9UJY5 639 aa17.29■□□□□ 0.36
UBE4B-201ENST00000253251 ARHGEF40Q8TER5 1519 aa17.29■□□□□ 0.36
UBE4B-201ENST00000253251 F13A1P00488 732 aa17.29■□□□□ 0.36
UBE4B-201ENST00000253251 CAMK4Q16566 473 aa17.29■□□□□ 0.36
UBE4B-201ENST00000253251 CAGE1Q8TC20 777 aa17.29■□□□□ 0.36
UBE4B-201ENST00000253251 MAP3K15Q6ZN16 1313 aa17.29■□□□□ 0.36
UBE4B-201ENST00000253251 KIF2AO00139 706 aaPredicted RBP17.29■□□□□ 0.36
UBE4B-201ENST00000253251 UBA7P41226 1012 aa17.29■□□□□ 0.36
UBE4B-201ENST00000253251 CFAP100Q494V2 611 aa17.29■□□□□ 0.36
UBE4B-201ENST00000253251 MCM9Q9NXL9 1143 aa17.29■□□□□ 0.36
UBE4B-201ENST00000253251 TFIP11Q9UBB9 837 aaKnown RBP17.29■□□□□ 0.36
UBE4B-201ENST00000253251 CTSWP56202 376 aa17.28■□□□□ 0.36
UBE4B-201ENST00000253251 PDE4CQ08493 712 aa17.28■□□□□ 0.36
UBE4B-201ENST00000253251 BRINP3Q76B58 766 aa17.28■□□□□ 0.36
UBE4B-201ENST00000253251 ZNF397Q8NF99 534 aaPredicted RBP17.28■□□□□ 0.36
UBE4B-201ENST00000253251 QRICH2Q9H0J4 1663 aa17.28■□□□□ 0.36
UBE4B-201ENST00000253251 JDP2Q8WYK2 163 aa17.28■□□□□ 0.36
UBE4B-201ENST00000253251 BRAPQ7Z569 592 aa17.28■□□□□ 0.36
UBE4B-201ENST00000253251 CCDC144CPQ8IYA2 1237 aa17.28■□□□□ 0.36
UBE4B-201ENST00000253251 SUPT20HQ8NEM7 779 aa17.28■□□□□ 0.36
UBE4B-201ENST00000253251 MBD4O95243 580 aa17.28■□□□□ 0.36
UBE4B-201ENST00000253251 LLPHQ9BRT6 129 aaKnown RBP17.28■□□□□ 0.36
UBE4B-201ENST00000253251 NEMFO60524 1076 aa17.27■□□□□ 0.36
UBE4B-201ENST00000253251 GTPBP4Q9BZE4 634 aaKnown RBP17.27■□□□□ 0.36
UBE4B-201ENST00000253251 GPR108Q9NPR9 543 aa17.27■□□□□ 0.36
UBE4B-201ENST00000253251 EIF5P55010 431 aaKnown RBP17.27■□□□□ 0.36
UBE4B-201ENST00000253251 PPP2R5BQ15173 497 aa17.27■□□□□ 0.36
UBE4B-201ENST00000253251 FKBP15Q5T1M5 1219 aa17.27■□□□□ 0.36
UBE4B-201ENST00000253251 COPRSQ9NQ92 184 aa17.27■□□□□ 0.36
UBE4B-201ENST00000253251 CLTCQ00610 1675 aaKnown RBP17.27■□□□□ 0.36
UBE4B-201ENST00000253251 VSIG10Q8N0Z9 540 aa17.27■□□□□ 0.35
UBE4B-201ENST00000253251 IBTKQ9P2D0 1353 aaPredicted RBP17.27■□□□□ 0.35
UBE4B-201ENST00000253251 PPP4R3AQ6IN85 833 aa17.27■□□□□ 0.35
UBE4B-201ENST00000253251 TBC1D22AQ8WUA7 517 aa17.27■□□□□ 0.35
UBE4B-201ENST00000253251 MPHOSPH6Q99547 160 aaKnown RBP17.27■□□□□ 0.35
UBE4B-201ENST00000253251 UFL1O94874 794 aa17.26■□□□□ 0.35
UBE4B-201ENST00000253251 RPS6KB1P23443 525 aa17.26■□□□□ 0.35
UBE4B-201ENST00000253251 STXBP4Q6ZWJ1 553 aa17.26■□□□□ 0.35
UBE4B-201ENST00000253251 RUFY1Q96T51 708 aa17.26■□□□□ 0.35
UBE4B-201ENST00000253251 TM6SF1Q9BZW5 370 aa17.26■□□□□ 0.35
UBE4B-201ENST00000253251 RMND1Q9NWS8 449 aa17.26■□□□□ 0.35
UBE4B-201ENST00000253251 HSP90AA2PQ14568 343 aaPredicted RBP17.26■□□□□ 0.35
UBE4B-201ENST00000253251 TEX35Q5T0J7 233 aa17.26■□□□□ 0.35
UBE4B-201ENST00000253251 OTUD7AQ8TE49 926 aaPredicted RBP17.26■□□□□ 0.35
UBE4B-201ENST00000253251 MAP7D2Q96T17 732 aa17.26■□□□□ 0.35
UBE4B-201ENST00000253251 KIDINS220Q9ULH0 1771 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms