RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 TBC1D2BQ9UPU7 963 aa20.53■□□□□ 0.88
LRFN3-201ENST00000246529 H3BQV1 296 aa20.53■□□□□ 0.88
LRFN3-201ENST00000246529 RESTQ13127 1097 aa20.53■□□□□ 0.88
LRFN3-201ENST00000246529 IFFO2Q5TF58 517 aa20.53■□□□□ 0.88
LRFN3-201ENST00000246529 LDHAL6AQ6ZMR3 332 aa20.53■□□□□ 0.88
LRFN3-201ENST00000246529 FAM184AQ8NB25 1140 aa20.53■□□□□ 0.88
LRFN3-201ENST00000246529 NSUN7Q8NE18 718 aaKnown RBP20.53■□□□□ 0.88
LRFN3-201ENST00000246529 RIC1Q4ADV7 1423 aa20.53■□□□□ 0.88
LRFN3-201ENST00000246529 PDIA4P13667 645 aaKnown RBP20.52■□□□□ 0.88
LRFN3-201ENST00000246529 CCDC39Q9UFE4 941 aa20.52■□□□□ 0.88
LRFN3-201ENST00000246529 ZKSCAN5Q9Y2L8 839 aa20.52■□□□□ 0.88
LRFN3-201ENST00000246529 NHSL1Q5SYE7 1610 aa20.52■□□□□ 0.88
LRFN3-201ENST00000246529 BCL9O00512 1426 aa20.52■□□□□ 0.87
LRFN3-201ENST00000246529 PTMAP06454 111 aaKnown RBP20.52■□□□□ 0.87
LRFN3-201ENST00000246529 ATP2B3Q16720 1220 aa20.52■□□□□ 0.87
LRFN3-201ENST00000246529 PUS7LQ9H0K6 701 aaKnown RBP20.52■□□□□ 0.87
LRFN3-201ENST00000246529 RIPOR2Q9Y4F9 1068 aa20.52■□□□□ 0.87
LRFN3-201ENST00000246529 ELP1O95163 1332 aa20.51■□□□□ 0.87
LRFN3-201ENST00000246529 SMARCC2Q8TAQ2 1214 aa20.51■□□□□ 0.87
LRFN3-201ENST00000246529 PTPDC1A2A3K4 754 aa20.51■□□□□ 0.87
LRFN3-201ENST00000246529 SCAND2PQ9GZW5 306 aaPredicted RBP20.51■□□□□ 0.87
LRFN3-201ENST00000246529 TRMT112Q9UI30 125 aaKnown RBP20.51■□□□□ 0.87
LRFN3-201ENST00000246529 IRS4O14654 1257 aaPredicted RBP20.5■□□□□ 0.87
LRFN3-201ENST00000246529 CTSWP56202 376 aa20.5■□□□□ 0.87
LRFN3-201ENST00000246529 CEBPZQ03701 1054 aaKnown RBP20.5■□□□□ 0.87
LRFN3-201ENST00000246529 UVSSAQ2YD98 709 aa20.5■□□□□ 0.87
LRFN3-201ENST00000246529 FBXO3Q9UK99 471 aa20.5■□□□□ 0.87
LRFN3-201ENST00000246529 DISP2A7MBM2 1401 aa20.5■□□□□ 0.87
LRFN3-201ENST00000246529 A0A0G2JS52 829 aa20.5■□□□□ 0.87
LRFN3-201ENST00000246529 PGBD1Q96JS3 809 aa20.5■□□□□ 0.87
LRFN3-201ENST00000246529 CNNM1Q9NRU3 951 aa20.5■□□□□ 0.87
LRFN3-201ENST00000246529 DACT1Q9NYF0 836 aa20.5■□□□□ 0.87
LRFN3-201ENST00000246529 LAMA4Q16363 1823 aa20.49■□□□□ 0.87
LRFN3-201ENST00000246529 GOLGA6L4A6NEF3 574 aa20.49■□□□□ 0.87
LRFN3-201ENST00000246529 ADCY5O95622 1261 aa20.49■□□□□ 0.87
LRFN3-201ENST00000246529 MCAMP43121 646 aa20.49■□□□□ 0.87
LRFN3-201ENST00000246529 PLCB2Q00722 1185 aa20.49■□□□□ 0.87
LRFN3-201ENST00000246529 AGXT2Q9BYV1 514 aa20.49■□□□□ 0.87
LRFN3-201ENST00000246529 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.49■□□□□ 0.87
LRFN3-201ENST00000246529 EXOC5O00471 708 aa20.49■□□□□ 0.87
LRFN3-201ENST00000246529 PDIA3P30101 505 aaKnown RBP20.49■□□□□ 0.87
LRFN3-201ENST00000246529 CKAP2LQ8IYA6 745 aa20.49■□□□□ 0.87
LRFN3-201ENST00000246529 FTOQ9C0B1 505 aaKnown RBP eCLIP20.49■□□□□ 0.87
LRFN3-201ENST00000246529 CDHR2Q9BYE9 1310 aa20.49■□□□□ 0.87
LRFN3-201ENST00000246529 FGAP02671 866 aa20.48■□□□□ 0.87
LRFN3-201ENST00000246529 GUCY1B3Q02153 619 aa20.48■□□□□ 0.87
LRFN3-201ENST00000246529 NUP62CLQ9H1M0 184 aa20.48■□□□□ 0.87
LRFN3-201ENST00000246529 ITGB4P16144 1822 aa20.48■□□□□ 0.87
LRFN3-201ENST00000246529 KAT6BQ8WYB5 2073 aa20.48■□□□□ 0.87
LRFN3-201ENST00000246529 ANKRD18BA2A2Z9 1011 aa20.48■□□□□ 0.87
LRFN3-201ENST00000246529 AP5Z1O43299 807 aa20.48■□□□□ 0.87
LRFN3-201ENST00000246529 ZNF830Q96NB3 372 aaPredicted RBP20.48■□□□□ 0.87
LRFN3-201ENST00000246529 LLPHQ9BRT6 129 aaKnown RBP20.48■□□□□ 0.87
LRFN3-201ENST00000246529 UBN2Q6ZU65 1347 aa20.48■□□□□ 0.87
LRFN3-201ENST00000246529 TICAM2Q86XR7 235 aa20.47■□□□□ 0.87
LRFN3-201ENST00000246529 DZIP3Q86Y13 1208 aaKnown RBP20.47■□□□□ 0.87
LRFN3-201ENST00000246529 FAM177BA6PVY3 158 aa20.47■□□□□ 0.87
LRFN3-201ENST00000246529 ZNF500O60304 480 aaPredicted RBP20.47■□□□□ 0.87
LRFN3-201ENST00000246529 RAB11FIP4Q86YS3 637 aa20.47■□□□□ 0.87
LRFN3-201ENST00000246529 HELBQ8NG08 1087 aaPredicted RBP20.47■□□□□ 0.87
LRFN3-201ENST00000246529 APPBP2Q92624 585 aa20.47■□□□□ 0.87
LRFN3-201ENST00000246529 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.47■□□□□ 0.87
LRFN3-201ENST00000246529 KDM4AO75164 1064 aa20.46■□□□□ 0.87
LRFN3-201ENST00000246529 NR1I2O75469 434 aa20.46■□□□□ 0.87
LRFN3-201ENST00000246529 OFD1O75665 1012 aa20.46■□□□□ 0.87
LRFN3-201ENST00000246529 MAP3K11Q16584 847 aa20.46■□□□□ 0.87
LRFN3-201ENST00000246529 GPAA1O43292 621 aa20.46■□□□□ 0.87
LRFN3-201ENST00000246529 ZFYP08048 801 aaPredicted RBP20.46■□□□□ 0.87
LRFN3-201ENST00000246529 VGLL2Q8N8G2 317 aa20.46■□□□□ 0.87
LRFN3-201ENST00000246529 BICD2Q8TD16 824 aa20.46■□□□□ 0.87
LRFN3-201ENST00000246529 LRP6O75581 1613 aa20.45■□□□□ 0.86
LRFN3-201ENST00000246529 CCDC192P0DO97 292 aa20.45■□□□□ 0.86
LRFN3-201ENST00000246529 IMMTQ16891 758 aaKnown RBP20.45■□□□□ 0.86
LRFN3-201ENST00000246529 LRRFIP1Q32MZ4 808 aaKnown RBP20.45■□□□□ 0.86
LRFN3-201ENST00000246529 SPEF2Q9C093 1822 aa20.45■□□□□ 0.86
LRFN3-201ENST00000246529 ADD1P35611 737 aaKnown RBP20.45■□□□□ 0.86
LRFN3-201ENST00000246529 TNMDQ9H2S6 317 aa20.45■□□□□ 0.86
LRFN3-201ENST00000246529 PIH1D3Q9NQM4 214 aaKnown RBP20.45■□□□□ 0.86
LRFN3-201ENST00000246529 ZSCAN16Q9H4T2 348 aaPredicted RBP20.44■□□□□ 0.86
LRFN3-201ENST00000246529 CTNNA3Q9UI47 895 aa20.44■□□□□ 0.86
LRFN3-201ENST00000246529 DENND2AQ9ULE3 1009 aa20.44■□□□□ 0.86
LRFN3-201ENST00000246529 SNAP23O00161 211 aa20.44■□□□□ 0.86
LRFN3-201ENST00000246529 PHKA1P46020 1223 aa20.44■□□□□ 0.86
LRFN3-201ENST00000246529 ZNF274Q96GC6 653 aaPredicted RBP20.44■□□□□ 0.86
LRFN3-201ENST00000246529 MRVI1Q9Y6F6 885 aa20.44■□□□□ 0.86
LRFN3-201ENST00000246529 SALL1Q9NSC2 1324 aa20.43■□□□□ 0.86
LRFN3-201ENST00000246529 PRC1O43663 620 aa20.43■□□□□ 0.86
LRFN3-201ENST00000246529 TYRO3Q06418 890 aa20.43■□□□□ 0.86
LRFN3-201ENST00000246529 SLC9C2Q5TAH2 1124 aa20.43■□□□□ 0.86
LRFN3-201ENST00000246529 NKX2-3Q8TAU0 364 aa20.43■□□□□ 0.86
LRFN3-201ENST00000246529 NWD2Q9ULI1 1742 aa20.43■□□□□ 0.86
LRFN3-201ENST00000246529 PDE8AO60658 829 aa20.43■□□□□ 0.86
LRFN3-201ENST00000246529 PDE8BO95263 885 aa20.43■□□□□ 0.86
LRFN3-201ENST00000246529 HMGN5P82970 282 aaKnown RBP20.43■□□□□ 0.86
LRFN3-201ENST00000246529 NAA16Q6N069 864 aaPredicted RBP20.43■□□□□ 0.86
LRFN3-201ENST00000246529 ACSBG1Q96GR2 724 aa20.43■□□□□ 0.86
LRFN3-201ENST00000246529 IDH1O75874 414 aaKnown RBP20.42■□□□□ 0.86
LRFN3-201ENST00000246529 FDPSP14324 419 aaKnown RBP20.42■□□□□ 0.86
LRFN3-201ENST00000246529 OTUD7BQ6GQQ9 843 aa20.42■□□□□ 0.86
LRFN3-201ENST00000246529 ANTXR2P58335 489 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms