RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 MYO5CQ9NQX4 1742 aa13.02□□□□□ -0.32
NIN-201ENST00000245441 LMOD1P29536 600 aaPredicted RBP13.02□□□□□ -0.32
NIN-201ENST00000245441 DCTPP1Q9H773 170 aa13.02□□□□□ -0.32
NIN-201ENST00000245441 ATP2B3Q16720 1220 aa13.02□□□□□ -0.32
NIN-201ENST00000245441 MRPL50Q8N5N7 158 aaKnown RBP13.02□□□□□ -0.32
NIN-201ENST00000245441 TRERF1Q96PN7 1200 aa13.02□□□□□ -0.32
NIN-201ENST00000245441 MARCKSP29966 332 aaPredicted RBP13.02□□□□□ -0.32
NIN-201ENST00000245441 PPP1R14CQ8TAE6 165 aa13.02□□□□□ -0.32
NIN-201ENST00000245441 CCDC97Q96F63 343 aaPredicted RBP13.02□□□□□ -0.32
NIN-201ENST00000245441 TTC14Q96N46 770 aa13.02□□□□□ -0.33
NIN-201ENST00000245441 KSR2Q6VAB6 950 aa13.02□□□□□ -0.33
NIN-201ENST00000245441 LMBR1Q8WVP7 490 aa13.02□□□□□ -0.33
NIN-201ENST00000245441 CCDC94Q9BW85 323 aaPredicted RBP13.02□□□□□ -0.33
NIN-201ENST00000245441 LRRC2Q9BYS8 371 aa13.02□□□□□ -0.33
NIN-201ENST00000245441 ZNF518AQ6AHZ1 1483 aa13.02□□□□□ -0.33
NIN-201ENST00000245441 SHANK2Q9UPX8 1470 aa13.02□□□□□ -0.33
NIN-201ENST00000245441 IQCGQ9H095 443 aaKnown RBP13.02□□□□□ -0.33
NIN-201ENST00000245441 VAT1LQ9HCJ6 419 aa13.02□□□□□ -0.33
NIN-201ENST00000245441 EXOC5O00471 708 aa13.01□□□□□ -0.33
NIN-201ENST00000245441 KIF4AO95239 1232 aa13.01□□□□□ -0.33
NIN-201ENST00000245441 TSNARE1Q96NA8 513 aa13.01□□□□□ -0.33
NIN-201ENST00000245441 TSGA10Q9BZW7 698 aa13.01□□□□□ -0.33
NIN-201ENST00000245441 FMNL3Q8IVF7 1028 aa13.01□□□□□ -0.33
NIN-201ENST00000245441 KIAA0556O60303 1618 aa13.01□□□□□ -0.33
NIN-201ENST00000245441 WDHD1O75717 1129 aaPredicted RBP13.01□□□□□ -0.33
NIN-201ENST00000245441 RAB11FIP4Q86YS3 637 aa13.01□□□□□ -0.33
NIN-201ENST00000245441 PLXNC1O60486 1568 aa13.01□□□□□ -0.33
NIN-201ENST00000245441 CNGA4Q8IV77 575 aa13.01□□□□□ -0.33
NIN-201ENST00000245441 C6orf229H3BNL8 230 aa13.01□□□□□ -0.33
NIN-201ENST00000245441 PPFIA3O75145 1194 aa13.01□□□□□ -0.33
NIN-201ENST00000245441 ASIC1P78348 528 aa13.01□□□□□ -0.33
NIN-201ENST00000245441 CAPN2P17655 700 aa13.01□□□□□ -0.33
NIN-201ENST00000245441 CALM1P0DP23 149 aa13□□□□□ -0.33
NIN-201ENST00000245441 CALM2P0DP24 149 aa13□□□□□ -0.33
NIN-201ENST00000245441 CALM3P0DP25 149 aa13□□□□□ -0.33
NIN-201ENST00000245441 RUFY3Q7L099 469 aa13□□□□□ -0.33
NIN-201ENST00000245441 PUF60Q9UHX1 559 aaKnown RBP13□□□□□ -0.33
NIN-201ENST00000245441 RAD50Q92878 1312 aa13□□□□□ -0.33
NIN-201ENST00000245441 MPHOSPH6Q99547 160 aaKnown RBP13□□□□□ -0.33
NIN-201ENST00000245441 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
NIN-201ENST00000245441 CCDC42Q96M95 316 aa13□□□□□ -0.33
NIN-201ENST00000245441 SYNCQ9H7C4 482 aa13□□□□□ -0.33
NIN-201ENST00000245441 CABP5Q9NP86 173 aa13□□□□□ -0.33
NIN-201ENST00000245441 FLT4P35916 1363 aa13□□□□□ -0.33
NIN-201ENST00000245441 ATP2A1O14983 1001 aa13□□□□□ -0.33
NIN-201ENST00000245441 FERP16591 822 aa13□□□□□ -0.33
NIN-201ENST00000245441 CCDC77Q9BR77 488 aa13□□□□□ -0.33
NIN-201ENST00000245441 HSP90AA4PQ58FG1 418 aa13□□□□□ -0.33
NIN-201ENST00000245441 TCEANC2Q96MN5 208 aa13□□□□□ -0.33
NIN-201ENST00000245441 PTGS1P23219 599 aa13□□□□□ -0.33
NIN-201ENST00000245441 AK2P54819 239 aa13□□□□□ -0.33
NIN-201ENST00000245441 CEP85Q6P2H3 762 aa13□□□□□ -0.33
NIN-201ENST00000245441 IPO4Q8TEX9 1081 aaKnown RBP13□□□□□ -0.33
NIN-201ENST00000245441 BICD1Q96G01 975 aa13□□□□□ -0.33
NIN-201ENST00000245441 MSL1Q68DK7 614 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 HEATR3Q7Z4Q2 680 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 DRC1Q96MC2 740 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 EBAG9O00559 213 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 IBSPP21815 317 aaPredicted RBP12.99□□□□□ -0.33
NIN-201ENST00000245441 COL17A1Q9UMD9 1497 aaPredicted RBP12.99□□□□□ -0.33
NIN-201ENST00000245441 PLEKHM2Q8IWE5 1019 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 ZBTB40Q9NUA8 1239 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 KRT13P13646 458 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 VAV2P52735 878 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 XAGE3Q8WTP9 111 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 FBF1Q8TES7 1133 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 V9GYY5 206 aaPredicted RBP12.99□□□□□ -0.33
NIN-201ENST00000245441 UBXN1Q04323 297 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 CREB3L3Q68CJ9 461 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 SLC4A4Q9Y6R1 1079 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 WDR62O43379 1518 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 SLC9C2Q5TAH2 1124 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 A2MP01023 1474 aa12.99□□□□□ -0.33
NIN-201ENST00000245441 KRT2P35908 639 aa12.98□□□□□ -0.33
NIN-201ENST00000245441 DHX32Q7L7V1 743 aaKnown RBP12.98□□□□□ -0.33
NIN-201ENST00000245441 MSH6P52701 1360 aa12.98□□□□□ -0.33
NIN-201ENST00000245441 NMIQ13287 307 aaPredicted RBP12.98□□□□□ -0.33
NIN-201ENST00000245441 UBE2Q2Q8WVN8 375 aa12.98□□□□□ -0.33
NIN-201ENST00000245441 RSPH14Q9UHP6 348 aa12.98□□□□□ -0.33
NIN-201ENST00000245441 NBPF6Q5VWK0 638 aa12.98□□□□□ -0.33
NIN-201ENST00000245441 NBPF5PQ86XG9 351 aaPredicted RBP12.98□□□□□ -0.33
NIN-201ENST00000245441 NBPF4Q96M43 638 aa12.98□□□□□ -0.33
NIN-201ENST00000245441 UHRF1BP1Q6BDS2 1440 aa12.98□□□□□ -0.33
NIN-201ENST00000245441 FBXO31Q5XUX0 539 aaPredicted RBP12.98□□□□□ -0.33
NIN-201ENST00000245441 C8orf58Q8NAV2 365 aa12.98□□□□□ -0.33
NIN-201ENST00000245441 LINS1Q8NG48 757 aa12.98□□□□□ -0.33
NIN-201ENST00000245441 PUS7Q96PZ0 661 aaKnown RBP12.98□□□□□ -0.33
NIN-201ENST00000245441 ELP1O95163 1332 aa12.98□□□□□ -0.33
NIN-201ENST00000245441 MAP3K5Q99683 1374 aa12.98□□□□□ -0.33
NIN-201ENST00000245441 CYP7A1P22680 504 aa12.98□□□□□ -0.33
NIN-201ENST00000245441 UHRF1BP1LA0JNW5 1464 aa12.98□□□□□ -0.33
NIN-201ENST00000245441 GPATCH11Q8N954 259 aa12.98□□□□□ -0.33
NIN-201ENST00000245441 NAPAP54920 295 aa12.98□□□□□ -0.33
NIN-201ENST00000245441 ATRIPQ8WXE1 791 aa12.97□□□□□ -0.33
NIN-201ENST00000245441 TCOF1Q13428 1488 aaKnown RBP12.97□□□□□ -0.33
NIN-201ENST00000245441 NPATQ14207 1427 aa12.97□□□□□ -0.33
NIN-201ENST00000245441 ZFP91Q96JP5 570 aaPredicted RBP12.97□□□□□ -0.33
NIN-201ENST00000245441 EIF4G3O43432 1585 aaKnown RBP12.97□□□□□ -0.33
NIN-201ENST00000245441 NEK11Q8NG66 645 aa12.97□□□□□ -0.33
NIN-201ENST00000245441 ZMYND15Q9H091 742 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms