RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 NEXNQ0ZGT2 675 aa23.34■■□□□ 1.33
HOXC13-201ENST00000243056 KRT27Q7Z3Y8 459 aa23.34■■□□□ 1.33
HOXC13-201ENST00000243056 LINC00116Q8NCU8 138 aa23.34■■□□□ 1.33
HOXC13-201ENST00000243056 GCKRQ14397 625 aa23.33■■□□□ 1.33
HOXC13-201ENST00000243056 FBXO41Q8TF61 875 aa23.33■■□□□ 1.33
HOXC13-201ENST00000243056 KAZALD1Q96I82 304 aa23.33■■□□□ 1.33
HOXC13-201ENST00000243056 PXDNLA1KZ92 1463 aa23.33■■□□□ 1.33
HOXC13-201ENST00000243056 USP27XA6NNY8 438 aa23.33■■□□□ 1.33
HOXC13-201ENST00000243056 GPTP24298 496 aa23.33■■□□□ 1.33
HOXC13-201ENST00000243056 C16orf71Q8IYS4 520 aaPredicted RBP23.33■■□□□ 1.33
HOXC13-201ENST00000243056 CCDC191Q8NCU4 936 aa23.33■■□□□ 1.33
HOXC13-201ENST00000243056 SMARCE1Q969G3 411 aa23.33■■□□□ 1.33
HOXC13-201ENST00000243056 SUCLG2Q96I99 432 aa23.33■■□□□ 1.33
HOXC13-201ENST00000243056 GRM8O00222 908 aa23.32■■□□□ 1.32
HOXC13-201ENST00000243056 PNMA6AP0CW24 399 aaPredicted RBP23.32■■□□□ 1.32
HOXC13-201ENST00000243056 POTEAQ6S8J7 498 aa23.32■■□□□ 1.32
HOXC13-201ENST00000243056 UBE3BQ7Z3V4 1068 aa23.32■■□□□ 1.32
HOXC13-201ENST00000243056 POLR3GO15318 223 aaPredicted RBP23.32■■□□□ 1.32
HOXC13-201ENST00000243056 EPHA10Q5JZY3 1008 aa23.32■■□□□ 1.32
HOXC13-201ENST00000243056 PPP1R42Q7Z4L9 355 aa23.32■■□□□ 1.32
HOXC13-201ENST00000243056 RPAP2Q8IXW5 612 aaPredicted RBP23.32■■□□□ 1.32
HOXC13-201ENST00000243056 BRMS1Q9HCU9 246 aa23.32■■□□□ 1.32
HOXC13-201ENST00000243056 GOLGB1Q14789 3259 aaKnown RBP23.31■■□□□ 1.32
HOXC13-201ENST00000243056 UBE2HP62256 183 aa23.31■■□□□ 1.32
HOXC13-201ENST00000243056 ZNF772Q68DY9 489 aaPredicted RBP23.31■■□□□ 1.32
HOXC13-201ENST00000243056 SYNE4Q8N205 404 aa23.31■■□□□ 1.32
HOXC13-201ENST00000243056 SDSP20132 328 aa23.31■■□□□ 1.32
HOXC13-201ENST00000243056 OTUD7AQ8TE49 926 aaPredicted RBP23.31■■□□□ 1.32
HOXC13-201ENST00000243056 A0A087WZG4 1122 aa23.3■■□□□ 1.32
HOXC13-201ENST00000243056 ALDH1L1O75891 902 aa23.3■■□□□ 1.32
HOXC13-201ENST00000243056 CLCN6P51797 869 aa23.3■■□□□ 1.32
HOXC13-201ENST00000243056 AMIGO3Q86WK7 504 aa23.3■■□□□ 1.32
HOXC13-201ENST00000243056 CACTINQ8WUQ7 758 aaKnown RBP23.3■■□□□ 1.32
HOXC13-201ENST00000243056 INTS4Q96HW7 963 aaKnown RBP23.3■■□□□ 1.32
HOXC13-201ENST00000243056 CCDC87Q9NVE4 849 aa23.3■■□□□ 1.32
HOXC13-201ENST00000243056 ZSCAN26Q16670 478 aa23.3■■□□□ 1.32
HOXC13-201ENST00000243056 BCCIPQ9P287 314 aaKnown RBP eCLIP23.3■■□□□ 1.32
HOXC13-201ENST00000243056 TJP1Q07157 1748 aa23.29■■□□□ 1.32
HOXC13-201ENST00000243056 WDR33Q9C0J8 1336 aaKnown RBP23.29■■□□□ 1.32
HOXC13-201ENST00000243056 SRGAP3O43295 1099 aa23.29■■□□□ 1.32
HOXC13-201ENST00000243056 ATP8B2P98198 1209 aa23.29■■□□□ 1.32
HOXC13-201ENST00000243056 DRC7Q8IY82 874 aa23.29■■□□□ 1.32
HOXC13-201ENST00000243056 BICC1Q9H694 974 aaKnown RBP23.29■■□□□ 1.32
HOXC13-201ENST00000243056 MYH14Q7Z406 1995 aaKnown RBP23.29■■□□□ 1.32
HOXC13-201ENST00000243056 TEX35Q5T0J7 233 aa23.29■■□□□ 1.32
HOXC13-201ENST00000243056 SRLQ86TD4 932 aa23.29■■□□□ 1.32
HOXC13-201ENST00000243056 SMARCC1Q92922 1105 aaPredicted RBP23.29■■□□□ 1.32
HOXC13-201ENST00000243056 DCTPP1Q9H773 170 aa23.29■■□□□ 1.32
HOXC13-201ENST00000243056 BRWD3Q6RI45 1802 aa23.28■■□□□ 1.32
HOXC13-201ENST00000243056 SLU7O95391 586 aaKnown RBP23.28■■□□□ 1.32
HOXC13-201ENST00000243056 NYAP1Q6ZVC0 841 aa23.28■■□□□ 1.32
HOXC13-201ENST00000243056 GPATCH11Q8N954 259 aa23.28■■□□□ 1.32
HOXC13-201ENST00000243056 BANK1Q8NDB2 785 aa23.28■■□□□ 1.32
HOXC13-201ENST00000243056 KLHDC4Q8TBB5 520 aa23.28■■□□□ 1.32
HOXC13-201ENST00000243056 SAMD1Q6SPF0 538 aaPredicted RBP23.28■■□□□ 1.32
HOXC13-201ENST00000243056 LUZP1Q86V48 1076 aa23.28■■□□□ 1.32
HOXC13-201ENST00000243056 DZIP3Q86Y13 1208 aaKnown RBP23.28■■□□□ 1.32
HOXC13-201ENST00000243056 PA2G4Q9UQ80 394 aaKnown RBP23.28■■□□□ 1.32
HOXC13-201ENST00000243056 CCNL1Q9UK58 526 aaPredicted RBP23.27■■□□□ 1.32
HOXC13-201ENST00000243056 RAD50Q92878 1312 aa23.27■■□□□ 1.32
HOXC13-201ENST00000243056 KIF6Q6ZMV9 814 aa23.27■■□□□ 1.31
HOXC13-201ENST00000243056 FAM200AQ8TCP9 573 aa23.27■■□□□ 1.31
HOXC13-201ENST00000243056 DRC1Q96MC2 740 aa23.27■■□□□ 1.31
HOXC13-201ENST00000243056 JRKLQ9Y4A0 524 aa23.27■■□□□ 1.31
HOXC13-201ENST00000243056 ARFGEF2Q9Y6D5 1785 aa23.26■■□□□ 1.31
HOXC13-201ENST00000243056 RXRBP28702 533 aa23.26■■□□□ 1.31
HOXC13-201ENST00000243056 MCM2P49736 904 aa23.26■■□□□ 1.31
HOXC13-201ENST00000243056 ERCC6LQ2NKX8 1250 aa23.26■■□□□ 1.31
HOXC13-201ENST00000243056 CCDC144BQ3MJ40 725 aa23.26■■□□□ 1.31
HOXC13-201ENST00000243056 CCDC144CPQ8IYA2 1237 aa23.26■■□□□ 1.31
HOXC13-201ENST00000243056 LRRN4CLQ8ND94 238 aa23.26■■□□□ 1.31
HOXC13-201ENST00000243056 LRRC4BQ9NT99 713 aa23.26■■□□□ 1.31
HOXC13-201ENST00000243056 RRP15Q9Y3B9 282 aaKnown RBP23.26■■□□□ 1.31
HOXC13-201ENST00000243056 BTAF1O14981 1849 aa23.26■■□□□ 1.31
HOXC13-201ENST00000243056 EIF5P55010 431 aaKnown RBP23.25■■□□□ 1.31
HOXC13-201ENST00000243056 MAP3K15Q6ZN16 1313 aa23.25■■□□□ 1.31
HOXC13-201ENST00000243056 FIBPO43427 364 aa23.24■■□□□ 1.31
HOXC13-201ENST00000243056 ZNF75DP51815 510 aa23.24■■□□□ 1.31
HOXC13-201ENST00000243056 PTPN14Q15678 1187 aa23.24■■□□□ 1.31
HOXC13-201ENST00000243056 CASC1Q6TDU7 716 aa23.24■■□□□ 1.31
HOXC13-201ENST00000243056 PLA2G4DQ86XP0 818 aa23.24■■□□□ 1.31
HOXC13-201ENST00000243056 FAM89AQ96GI7 184 aa23.24■■□□□ 1.31
HOXC13-201ENST00000243056 CCDC171Q6TFL3 1326 aa23.24■■□□□ 1.31
HOXC13-201ENST00000243056 CCDC192P0DO97 292 aa23.24■■□□□ 1.31
HOXC13-201ENST00000243056 IL6STP40189 918 aaPredicted RBP23.24■■□□□ 1.31
HOXC13-201ENST00000243056 SART3Q15020 963 aaKnown RBP23.24■■□□□ 1.31
HOXC13-201ENST00000243056 RNF20Q5VTR2 975 aa23.24■■□□□ 1.31
HOXC13-201ENST00000243056 PACS2Q86VP3 889 aa23.24■■□□□ 1.31
HOXC13-201ENST00000243056 CCDC85AQ96PX6 553 aaPredicted RBP23.24■■□□□ 1.31
HOXC13-201ENST00000243056 ERC2O15083 957 aa23.23■■□□□ 1.31
HOXC13-201ENST00000243056 TPM4P67936 248 aa23.23■■□□□ 1.31
HOXC13-201ENST00000243056 TCIRG1Q13488 830 aa23.23■■□□□ 1.31
HOXC13-201ENST00000243056 CEP83Q9Y592 693 aa23.23■■□□□ 1.31
HOXC13-201ENST00000243056 ZRANB2O95218 330 aaKnown RBP eCLIP23.23■■□□□ 1.31
HOXC13-201ENST00000243056 PALD1Q9ULE6 856 aa23.23■■□□□ 1.31
HOXC13-201ENST00000243056 SURF6O75683 361 aaKnown RBP23.22■■□□□ 1.31
HOXC13-201ENST00000243056 FAM196AQ6ZSG2 479 aa23.22■■□□□ 1.31
HOXC13-201ENST00000243056 IL1RAPL2Q9NP60 686 aa23.22■■□□□ 1.31
HOXC13-201ENST00000243056 MRVI1Q9Y6F6 885 aa23.22■■□□□ 1.31
HOXC13-201ENST00000243056 HMMRO75330 724 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms