RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 CIAO1O76071 339 aa13.26□□□□□ -0.29
PFDN5-201ENST00000243040 KLRK1P26718 216 aa13.26□□□□□ -0.29
PFDN5-201ENST00000243040 LMOD1P29536 600 aaPredicted RBP13.26□□□□□ -0.29
PFDN5-201ENST00000243040 DCAF8Q5TAQ9 597 aa13.26□□□□□ -0.29
PFDN5-201ENST00000243040 PANK1Q8TE04 598 aa13.26□□□□□ -0.29
PFDN5-201ENST00000243040 SNAP23O00161 211 aa13.25□□□□□ -0.29
PFDN5-201ENST00000243040 SRGAP3O43295 1099 aa13.25□□□□□ -0.29
PFDN5-201ENST00000243040 PDE8BO95263 885 aa13.25□□□□□ -0.29
PFDN5-201ENST00000243040 VIL1P09327 827 aaKnown RBP13.25□□□□□ -0.29
PFDN5-201ENST00000243040 RPS12P25398 132 aaKnown RBP13.25□□□□□ -0.29
PFDN5-201ENST00000243040 EPHX2P34913 555 aa13.25□□□□□ -0.29
PFDN5-201ENST00000243040 GMPSP49915 693 aaPredicted RBP13.25□□□□□ -0.29
PFDN5-201ENST00000243040 FSTL1Q12841 308 aa13.25□□□□□ -0.29
PFDN5-201ENST00000243040 PDE3AQ14432 1141 aa13.25□□□□□ -0.29
PFDN5-201ENST00000243040 MVPQ14764 893 aaKnown RBP13.25□□□□□ -0.29
PFDN5-201ENST00000243040 METTL24Q5JXM2 366 aa13.25□□□□□ -0.29
PFDN5-201ENST00000243040 DPF2Q92785 391 aa13.25□□□□□ -0.29
PFDN5-201ENST00000243040 GPRC5DQ9NZD1 345 aa13.25□□□□□ -0.29
PFDN5-201ENST00000243040 PLIN1O60240 522 aa13.24□□□□□ -0.29
PFDN5-201ENST00000243040 ATG9AQ7Z3C6 839 aa13.24□□□□□ -0.29
PFDN5-201ENST00000243040 PNMA8AQ86V59 439 aaPredicted RBP13.24□□□□□ -0.29
PFDN5-201ENST00000243040 SMC1BQ8NDV3 1235 aa13.24□□□□□ -0.29
PFDN5-201ENST00000243040 CD209Q9NNX6 404 aa13.24□□□□□ -0.29
PFDN5-201ENST00000243040 KCNQ5Q9NR82 932 aa13.24□□□□□ -0.29
PFDN5-201ENST00000243040 DDX19BQ9UMR2 479 aa13.24□□□□□ -0.29
PFDN5-201ENST00000243040 ECM29Q5VYK3 1845 aa13.23□□□□□ -0.29
PFDN5-201ENST00000243040 PNMA6EA0A0J9YXQ4 647 aa13.23□□□□□ -0.29
PFDN5-201ENST00000243040 USP17L3A6NCW0 530 aa13.23□□□□□ -0.29
PFDN5-201ENST00000243040 USP17L4A6NCW7 530 aa13.23□□□□□ -0.29
PFDN5-201ENST00000243040 IL1R1P14778 569 aa13.23□□□□□ -0.29
PFDN5-201ENST00000243040 FGFR2P21802 821 aa13.23□□□□□ -0.29
PFDN5-201ENST00000243040 IL15P40933 162 aaPredicted RBP13.23□□□□□ -0.29
PFDN5-201ENST00000243040 EPS15P42566 896 aa13.23□□□□□ -0.29
PFDN5-201ENST00000243040 RSBN1LQ6PCB5 846 aaPredicted RBP13.23□□□□□ -0.29
PFDN5-201ENST00000243040 USP17L1Q7RTZ2 530 aa13.23□□□□□ -0.29
PFDN5-201ENST00000243040 ZNF804AQ7Z570 1209 aa13.23□□□□□ -0.29
PFDN5-201ENST00000243040 LDHDQ86WU2 507 aa13.23□□□□□ -0.29
PFDN5-201ENST00000243040 ADARB2Q9NS39 739 aaKnown RBP13.23□□□□□ -0.29
PFDN5-201ENST00000243040 PA2G4Q9UQ80 394 aaKnown RBP13.23□□□□□ -0.29
PFDN5-201ENST00000243040 MYO3BQ8WXR4 1341 aa13.22□□□□□ -0.29
PFDN5-201ENST00000243040 POTEIP0CG38 1075 aa13.22□□□□□ -0.29
PFDN5-201ENST00000243040 POTEJP0CG39 1038 aa13.22□□□□□ -0.29
PFDN5-201ENST00000243040 POLA2Q14181 598 aa13.22□□□□□ -0.29
PFDN5-201ENST00000243040 PUM3Q15397 648 aaKnown RBP13.22□□□□□ -0.29
PFDN5-201ENST00000243040 STRIP1Q5VSL9 837 aa13.22□□□□□ -0.29
PFDN5-201ENST00000243040 USP50Q70EL3 339 aaPredicted RBP13.22□□□□□ -0.29
PFDN5-201ENST00000243040 AGBL3Q8NEM8 1001 aa13.22□□□□□ -0.29
PFDN5-201ENST00000243040 SSH3Q8TE77 659 aa13.22□□□□□ -0.29
PFDN5-201ENST00000243040 SIL1Q9H173 461 aa13.22□□□□□ -0.29
PFDN5-201ENST00000243040 COG6Q9Y2V7 657 aa13.22□□□□□ -0.29
PFDN5-201ENST00000243040 ZBTB12Q9Y330 459 aaPredicted RBP13.22□□□□□ -0.29
PFDN5-201ENST00000243040 TRPM7Q96QT4 1865 aa13.21□□□□□ -0.29
PFDN5-201ENST00000243040 ATP8B2P98198 1209 aa13.21□□□□□ -0.29
PFDN5-201ENST00000243040 DACT2Q5SW24 774 aa13.21□□□□□ -0.29
PFDN5-201ENST00000243040 CHADLQ6NUI6 762 aa13.21□□□□□ -0.29
PFDN5-201ENST00000243040 MICALL2Q8IY33 904 aa13.21□□□□□ -0.29
PFDN5-201ENST00000243040 LPIN2Q92539 896 aa13.21□□□□□ -0.29
PFDN5-201ENST00000243040 FAM84BQ96KN1 310 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-201ENST00000243040 GMLQ99445 158 aa13.21□□□□□ -0.29
PFDN5-201ENST00000243040 CHMP4BQ9H444 224 aaKnown RBP13.21□□□□□ -0.29
PFDN5-201ENST00000243040 C1orf115Q9H7X2 142 aa13.21□□□□□ -0.29
PFDN5-201ENST00000243040 CNOT7Q9UIV1 285 aaKnown RBP13.21□□□□□ -0.29
PFDN5-201ENST00000243040 H7C1D1 291 aa13.2□□□□□ -0.3
PFDN5-201ENST00000243040 HIBADHP31937 336 aaKnown RBP13.2□□□□□ -0.3
PFDN5-201ENST00000243040 RRP1P56182 461 aaKnown RBP13.2□□□□□ -0.3
PFDN5-201ENST00000243040 EAPPQ56P03 285 aaPredicted RBP13.2□□□□□ -0.3
PFDN5-201ENST00000243040 C20orf194Q5TEA3 1177 aa13.2□□□□□ -0.3
PFDN5-201ENST00000243040 CEP85Q6P2H3 762 aa13.2□□□□□ -0.3
PFDN5-201ENST00000243040 TDRD7Q8NHU6 1098 aaKnown RBP13.2□□□□□ -0.3
PFDN5-201ENST00000243040 ZBTB40Q9NUA8 1239 aa13.2□□□□□ -0.3
PFDN5-201ENST00000243040 CEP126Q9P2H0 1117 aa13.2□□□□□ -0.3
PFDN5-201ENST00000243040 FAM205AQ6ZU69 1335 aa13.19□□□□□ -0.3
PFDN5-201ENST00000243040 ZBTB22O15209 634 aa13.19□□□□□ -0.3
PFDN5-201ENST00000243040 IFIT1P09914 478 aaKnown RBP13.19□□□□□ -0.3
PFDN5-201ENST00000243040 SLC5A1P13866 664 aa13.19□□□□□ -0.3
PFDN5-201ENST00000243040 HSPA6P17066 643 aa13.19□□□□□ -0.3
PFDN5-201ENST00000243040 GYG1P46976 350 aa13.19□□□□□ -0.3
PFDN5-201ENST00000243040 MMP14P50281 582 aa13.19□□□□□ -0.3
PFDN5-201ENST00000243040 ZNF280AP59817 542 aaPredicted RBP13.19□□□□□ -0.3
PFDN5-201ENST00000243040 FKBP1AP62942 108 aaKnown RBP13.19□□□□□ -0.3
PFDN5-201ENST00000243040 TTLL5Q6EMB2 1281 aa13.19□□□□□ -0.3
PFDN5-201ENST00000243040 FBXO33Q7Z6M2 555 aa13.19□□□□□ -0.3
PFDN5-201ENST00000243040 POLR2AP24928 1970 aaKnown RBP13.18□□□□□ -0.3
PFDN5-201ENST00000243040 SHTN1A0MZ66 631 aa13.18□□□□□ -0.3
PFDN5-201ENST00000243040 SASH1O94885 1247 aa13.18□□□□□ -0.3
PFDN5-201ENST00000243040 GTF2IP78347 998 aa13.18□□□□□ -0.3
PFDN5-201ENST00000243040 ATP2B3Q16720 1220 aa13.18□□□□□ -0.3
PFDN5-201ENST00000243040 CAVIN4Q5BKX8 364 aa13.18□□□□□ -0.3
PFDN5-201ENST00000243040 TRPM4Q8TD43 1214 aa13.18□□□□□ -0.3
PFDN5-201ENST00000243040 PGAP2Q9UHJ9 254 aa13.18□□□□□ -0.3
PFDN5-201ENST00000243040 NOP58Q9Y2X3 529 aaKnown RBP13.18□□□□□ -0.3
PFDN5-201ENST00000243040 RPAP2Q8IXW5 612 aaPredicted RBP13.17□□□□□ -0.3
PFDN5-201ENST00000243040 ZC3H15Q8WU90 426 aaKnown RBP13.17□□□□□ -0.3
PFDN5-201ENST00000243040 FBXW7Q969H0 707 aa13.17□□□□□ -0.3
PFDN5-201ENST00000243040 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-201ENST00000243040 PASKQ96RG2 1323 aa13.16□□□□□ -0.3
PFDN5-201ENST00000243040 USP17L8P0C7I0 530 aa13.16□□□□□ -0.3
PFDN5-201ENST00000243040 HIRAP54198 1017 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-201ENST00000243040 G3BP1Q13283 466 aaKnown RBP eCLIP13.16□□□□□ -0.3
PFDN5-201ENST00000243040 KIF4BQ2VIQ3 1234 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms