RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 LRRC2Q9BYS8 371 aa16.44■□□□□ 0.22
SF1-201ENST00000227503 SLC27A2O14975 620 aa16.44■□□□□ 0.22
SF1-201ENST00000227503 OAS2P29728 719 aaKnown RBP16.44■□□□□ 0.22
SF1-201ENST00000227503 IRX3P78415 501 aaPredicted RBP16.44■□□□□ 0.22
SF1-201ENST00000227503 ARMCX5Q6P1M9 558 aa16.44■□□□□ 0.22
SF1-201ENST00000227503 TMCO3Q6UWJ1 677 aa16.44■□□□□ 0.22
SF1-201ENST00000227503 CCAR1Q8IX12 1150 aaKnown RBP16.44■□□□□ 0.22
SF1-201ENST00000227503 A0A0D9SFI3 127 aa16.44■□□□□ 0.22
SF1-201ENST00000227503 CCDC191Q8NCU4 936 aa16.44■□□□□ 0.22
SF1-201ENST00000227503 SARM1Q6SZW1 724 aa16.43■□□□□ 0.22
SF1-201ENST00000227503 L2HGDHQ9H9P8 463 aa16.43■□□□□ 0.22
SF1-201ENST00000227503 NPHP4O75161 1426 aaPredicted RBP16.43■□□□□ 0.22
SF1-201ENST00000227503 TOB2Q14106 344 aaPredicted RBP16.43■□□□□ 0.22
SF1-201ENST00000227503 STX1AQ16623 288 aa16.43■□□□□ 0.22
SF1-201ENST00000227503 UBXN4Q92575 508 aa16.43■□□□□ 0.22
SF1-201ENST00000227503 CARD6Q9BX69 1037 aa16.43■□□□□ 0.22
SF1-201ENST00000227503 BIN1O00499 593 aa16.42■□□□□ 0.22
SF1-201ENST00000227503 URI1O94763 535 aaPredicted RBP16.42■□□□□ 0.22
SF1-201ENST00000227503 ZRANB2O95218 330 aaKnown RBP eCLIP16.42■□□□□ 0.221e-6■■■□□ 14.8
SF1-201ENST00000227503 ISM2Q6H9L7 571 aa16.42■□□□□ 0.22
SF1-201ENST00000227503 SIL1Q9H173 461 aa16.42■□□□□ 0.22
SF1-201ENST00000227503 BOLA2Q9H3K6 86 aa16.42■□□□□ 0.22
SF1-201ENST00000227503 ORC3Q9UBD5 711 aaPredicted RBP16.42■□□□□ 0.22
SF1-201ENST00000227503 MED23Q9ULK4 1368 aa16.42■□□□□ 0.22
SF1-201ENST00000227503 MRC1P22897 1456 aa16.42■□□□□ 0.22
SF1-201ENST00000227503 GUCY1B3Q02153 619 aa16.42■□□□□ 0.22
SF1-201ENST00000227503 CCDC93Q567U6 631 aa16.42■□□□□ 0.22
SF1-201ENST00000227503 KLHL34Q8N239 644 aa16.42■□□□□ 0.22
SF1-201ENST00000227503 KLHDC4Q8TBB5 520 aa16.42■□□□□ 0.22
SF1-201ENST00000227503 XPO4Q9C0E2 1151 aaKnown RBP16.42■□□□□ 0.22
SF1-201ENST00000227503 IFNKQ9P0W0 207 aa16.42■□□□□ 0.22
SF1-201ENST00000227503 NEURL1BA8MQ27 555 aa16.41■□□□□ 0.22
SF1-201ENST00000227503 H3BQV1 296 aa16.41■□□□□ 0.22
SF1-201ENST00000227503 NEMFO60524 1076 aa16.41■□□□□ 0.22
SF1-201ENST00000227503 EPHA10Q5JZY3 1008 aa16.41■□□□□ 0.22
SF1-201ENST00000227503 IFFO2Q5TF58 517 aa16.41■□□□□ 0.22
SF1-201ENST00000227503 LMOD2Q6P5Q4 547 aa16.41■□□□□ 0.22
SF1-201ENST00000227503 ZNF790Q6PG37 636 aa16.41■□□□□ 0.22
SF1-201ENST00000227503 BLOC1S2Q6QNY1 142 aa16.41■□□□□ 0.22
SF1-201ENST00000227503 PDCP20941 246 aa16.41■□□□□ 0.22
SF1-201ENST00000227503 PSMA5P28066 241 aa16.41■□□□□ 0.22
SF1-201ENST00000227503 SLC39A6Q13433 755 aa16.41■□□□□ 0.22
SF1-201ENST00000227503 ZSCAN26Q16670 478 aa16.41■□□□□ 0.22
SF1-201ENST00000227503 RIC3Q7Z5B4 369 aa16.41■□□□□ 0.22
SF1-201ENST00000227503 JCADQ9P266 1359 aa16.41■□□□□ 0.22
SF1-201ENST00000227503 MYO1CO00159 1063 aa16.4■□□□□ 0.22
SF1-201ENST00000227503 CHGBP05060 677 aa16.4■□□□□ 0.22
SF1-201ENST00000227503 RESTQ13127 1097 aa16.4■□□□□ 0.22
SF1-201ENST00000227503 TAF7LQ5H9L4 462 aa16.4■□□□□ 0.22
SF1-201ENST00000227503 FSD1Q9BTV5 496 aa16.4■□□□□ 0.22
SF1-201ENST00000227503 TRPM3Q9HCF6 1732 aaPredicted RBP16.4■□□□□ 0.22
SF1-201ENST00000227503 GCKRQ14397 625 aa16.4■□□□□ 0.22
SF1-201ENST00000227503 TEX35Q5T0J7 233 aa16.4■□□□□ 0.22
SF1-201ENST00000227503 MNS1Q8NEH6 495 aa16.4■□□□□ 0.22
SF1-201ENST00000227503 ALDH8A1Q9H2A2 487 aaPredicted RBP16.4■□□□□ 0.22
SF1-201ENST00000227503 C5P01031 1676 aa16.4■□□□□ 0.22
SF1-201ENST00000227503 ZNF142P52746 1687 aaPredicted RBP16.4■□□□□ 0.22
SF1-201ENST00000227503 KDM6AO15550 1401 aaPredicted RBP16.4■□□□□ 0.22
SF1-201ENST00000227503 ANKRD65E5RJM6 399 aa16.4■□□□□ 0.22
SF1-201ENST00000227503 GNL2Q13823 731 aaKnown RBP16.4■□□□□ 0.22
SF1-201ENST00000227503 RASSF4Q9H2L5 321 aa16.4■□□□□ 0.22
SF1-201ENST00000227503 HSP90B1P14625 803 aaKnown RBP16.39■□□□□ 0.21
SF1-201ENST00000227503 LMAN1P49257 510 aa16.39■□□□□ 0.21
SF1-201ENST00000227503 ZNF589Q86UQ0 364 aaPredicted RBP16.39■□□□□ 0.21
SF1-201ENST00000227503 XAGE3Q8WTP9 111 aa16.39■□□□□ 0.21
SF1-201ENST00000227503 SLC52A2Q9HAB3 445 aa16.39■□□□□ 0.21
SF1-201ENST00000227503 MYL6BP14649 208 aa16.39■□□□□ 0.21
SF1-201ENST00000227503 RPS6KB1P23443 525 aa16.39■□□□□ 0.21
SF1-201ENST00000227503 DPCR1Q3MIW9 517 aa16.39■□□□□ 0.21
SF1-201ENST00000227503 EDC3Q96F86 508 aaKnown RBP16.39■□□□□ 0.21
SF1-201ENST00000227503 SEC62Q99442 399 aaKnown RBP16.39■□□□□ 0.21
SF1-201ENST00000227503 METTL22Q9BUU2 404 aaPredicted RBP16.39■□□□□ 0.21
SF1-201ENST00000227503 TBC1D8O95759 1140 aa16.38■□□□□ 0.21
SF1-201ENST00000227503 SFPQP23246 707 aaKnown RBP eCLIP16.38■□□□□ 0.21
SF1-201ENST00000227503 NEXNQ0ZGT2 675 aa16.38■□□□□ 0.21
SF1-201ENST00000227503 TSGA10IPQ3SY00 556 aa16.38■□□□□ 0.21
SF1-201ENST00000227503 RNF20Q5VTR2 975 aa16.38■□□□□ 0.21
SF1-201ENST00000227503 COPS6Q7L5N1 327 aa16.38■□□□□ 0.21
SF1-201ENST00000227503 KRT28Q7Z3Y7 464 aa16.38■□□□□ 0.21
SF1-201ENST00000227503 LRP10Q7Z4F1 713 aa16.38■□□□□ 0.21
SF1-201ENST00000227503 MYD88Q99836 296 aa16.38■□□□□ 0.21
SF1-201ENST00000227503 ZSWIM4Q9H7M6 989 aa16.38■□□□□ 0.21
SF1-201ENST00000227503 TAOK2Q9UL54 1235 aa16.38■□□□□ 0.21
SF1-201ENST00000227503 RGPD5Q99666 1765 aa16.38■□□□□ 0.21
SF1-201ENST00000227503 EVCP57679 992 aa16.37■□□□□ 0.21
SF1-201ENST00000227503 TPM4P67936 248 aa16.37■□□□□ 0.21
SF1-201ENST00000227503 SMC1AQ14683 1233 aaKnown RBP16.37■□□□□ 0.21
SF1-201ENST00000227503 USP28Q96RU2 1077 aa16.37■□□□□ 0.21
SF1-201ENST00000227503 NDUFB9Q9Y6M9 179 aa16.37■□□□□ 0.21
SF1-201ENST00000227503 KINO60870 393 aaKnown RBP16.37■□□□□ 0.21
SF1-201ENST00000227503 TAF5LO75529 589 aa16.37■□□□□ 0.21
SF1-201ENST00000227503 RFX5P48382 616 aaPredicted RBP16.37■□□□□ 0.21
SF1-201ENST00000227503 ANKRD1Q15327 319 aa16.37■□□□□ 0.21
SF1-201ENST00000227503 TXLNBQ8N3L3 684 aa16.37■□□□□ 0.21
SF1-201ENST00000227503 FSIP1Q8NA03 581 aa16.37■□□□□ 0.21
SF1-201ENST00000227503 COPRSQ9NQ92 184 aa16.37■□□□□ 0.21
SF1-201ENST00000227503 TOMM22Q9NS69 142 aa16.37■□□□□ 0.21
SF1-201ENST00000227503 A0A1B0GVL5 298 aa16.36■□□□□ 0.21
SF1-201ENST00000227503 FOXR1Q6PIV2 292 aa16.36■□□□□ 0.21
SF1-201ENST00000227503 REXO1L1PQ8IX06 675 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms