RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CLSTN2Q9H4D0 955 aa25.9■■□□□ 1.74
SMARCD2-201ENST00000225742 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.9■■□□□ 1.74
SMARCD2-201ENST00000225742 TAF7LQ5H9L4 462 aa25.89■■□□□ 1.74
SMARCD2-201ENST00000225742 GIGYF2Q6Y7W6 1299 aaKnown RBP25.89■■□□□ 1.74
SMARCD2-201ENST00000225742 DNAJC10Q8IXB1 793 aa25.89■■□□□ 1.74
SMARCD2-201ENST00000225742 TFIP11Q9UBB9 837 aaKnown RBP25.89■■□□□ 1.74
SMARCD2-201ENST00000225742 M0R2C6 588 aa25.88■■□□□ 1.73
SMARCD2-201ENST00000225742 EVCP57679 992 aa25.88■■□□□ 1.73
SMARCD2-201ENST00000225742 FAM200AQ8TCP9 573 aa25.88■■□□□ 1.73
SMARCD2-201ENST00000225742 PIGBQ92521 554 aa25.88■■□□□ 1.73
SMARCD2-201ENST00000225742 TNMDQ9H2S6 317 aa25.88■■□□□ 1.73
SMARCD2-201ENST00000225742 LRP6O75581 1613 aa25.88■■□□□ 1.73
SMARCD2-201ENST00000225742 ITGB4P16144 1822 aa25.88■■□□□ 1.73
SMARCD2-201ENST00000225742 ANKRD36CQ5JPF3 1778 aa25.86■■□□□ 1.73
SMARCD2-201ENST00000225742 FKBP4Q02790 459 aaKnown RBP eCLIP25.86■■□□□ 1.73
SMARCD2-201ENST00000225742 TYRO3Q06418 890 aa25.86■■□□□ 1.73
SMARCD2-201ENST00000225742 APOBRQ0VD83 1088 aa25.86■■□□□ 1.73
SMARCD2-201ENST00000225742 OSBP2Q969R2 916 aa25.86■■□□□ 1.73
SMARCD2-201ENST00000225742 ZNF512BQ96KM6 892 aaPredicted RBP25.86■■□□□ 1.73
SMARCD2-201ENST00000225742 LRRC2Q9BYS8 371 aa25.86■■□□□ 1.73
SMARCD2-201ENST00000225742 DACT1Q9NYF0 836 aa25.86■■□□□ 1.73
SMARCD2-201ENST00000225742 MYH7P12883 1935 aa25.86■■□□□ 1.73
SMARCD2-201ENST00000225742 PTPDC1A2A3K4 754 aa25.86■■□□□ 1.73
SMARCD2-201ENST00000225742 CAVIN2O95810 425 aa25.86■■□□□ 1.73
SMARCD2-201ENST00000225742 APPBP2Q92624 585 aa25.86■■□□□ 1.73
SMARCD2-201ENST00000225742 DDX11Q96FC9 970 aa25.86■■□□□ 1.73
SMARCD2-201ENST00000225742 ASAP1Q9ULH1 1129 aa25.86■■□□□ 1.73
SMARCD2-201ENST00000225742 SALL1Q9NSC2 1324 aa25.86■■□□□ 1.73
SMARCD2-201ENST00000225742 CTDNEP1O95476 244 aa25.85■■□□□ 1.73
SMARCD2-201ENST00000225742 IMMTQ16891 758 aaKnown RBP25.85■■□□□ 1.73
SMARCD2-201ENST00000225742 ZNF396Q96N95 335 aaPredicted RBP25.85■■□□□ 1.73
SMARCD2-201ENST00000225742 PDIA3P30101 505 aaKnown RBP25.84■■□□□ 1.73
SMARCD2-201ENST00000225742 ADORA1P30542 326 aa25.84■■□□□ 1.73
SMARCD2-201ENST00000225742 SLFNL1Q499Z3 407 aa25.84■■□□□ 1.73
SMARCD2-201ENST00000225742 ZSCAN25Q6NSZ9 544 aa25.84■■□□□ 1.73
SMARCD2-201ENST00000225742 FAM89AQ96GI7 184 aa25.84■■□□□ 1.73
SMARCD2-201ENST00000225742 PGBD1Q96JS3 809 aa25.84■■□□□ 1.73
SMARCD2-201ENST00000225742 RCOR1Q9UKL0 485 aa25.84■■□□□ 1.73
SMARCD2-201ENST00000225742 MRVI1Q9Y6F6 885 aa25.84■■□□□ 1.73
SMARCD2-201ENST00000225742 WDR19Q8NEZ3 1342 aa25.84■■□□□ 1.73
SMARCD2-201ENST00000225742 BICD2Q8TD16 824 aa25.84■■□□□ 1.73
SMARCD2-201ENST00000225742 RIPOR2Q9Y4F9 1068 aa25.84■■□□□ 1.73
SMARCD2-201ENST00000225742 DISP2A7MBM2 1401 aa25.84■■□□□ 1.73
SMARCD2-201ENST00000225742 RIC1Q4ADV7 1423 aa25.84■■□□□ 1.73
SMARCD2-201ENST00000225742 ATP2B3Q16720 1220 aa25.83■■□□□ 1.73
SMARCD2-201ENST00000225742 NLRP10Q86W26 655 aa25.83■■□□□ 1.73
SMARCD2-201ENST00000225742 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.83■■□□□ 1.739e-8■■□□□ 14.4
SMARCD2-201ENST00000225742 MYH3P11055 1940 aa25.82■■□□□ 1.72
SMARCD2-201ENST00000225742 GOLGA6L6A8MZA4 724 aa25.82■■□□□ 1.72
SMARCD2-201ENST00000225742 ADD1P35611 737 aaKnown RBP25.82■■□□□ 1.72
SMARCD2-201ENST00000225742 RGS22Q8NE09 1264 aa25.82■■□□□ 1.72
SMARCD2-201ENST00000225742 ZNF330Q9Y3S2 320 aaPredicted RBP25.82■■□□□ 1.72
SMARCD2-201ENST00000225742 COL14A1Q05707 1796 aaKnown RBP25.82■■□□□ 1.72
SMARCD2-201ENST00000225742 NWD2Q9ULI1 1742 aa25.82■■□□□ 1.72
SMARCD2-201ENST00000225742 ZNF335Q9H4Z2 1342 aaPredicted RBP25.82■■□□□ 1.72
SMARCD2-201ENST00000225742 CTAGE5O15320 804 aa25.81■■□□□ 1.72
SMARCD2-201ENST00000225742 WASHC4Q2M389 1173 aa25.81■■□□□ 1.72
SMARCD2-201ENST00000225742 PIBF1Q8WXW3 757 aa25.81■■□□□ 1.72
SMARCD2-201ENST00000225742 BCL9O00512 1426 aa25.81■■□□□ 1.72
SMARCD2-201ENST00000225742 ANKRD18BA2A2Z9 1011 aa25.81■■□□□ 1.72
SMARCD2-201ENST00000225742 TTLL11Q8NHH1 800 aa25.81■■□□□ 1.72
SMARCD2-201ENST00000225742 PLCH1Q4KWH8 1693 aa25.8■■□□□ 1.72
SMARCD2-201ENST00000225742 DHX16O60231 1041 aaKnown RBP25.8■■□□□ 1.72
SMARCD2-201ENST00000225742 TTF1Q15361 905 aaPredicted RBP25.8■■□□□ 1.72
SMARCD2-201ENST00000225742 METTL24Q5JXM2 366 aa25.8■■□□□ 1.72
SMARCD2-201ENST00000225742 R3HCC1Q9Y3T6 440 aaKnown RBP25.8■■□□□ 1.72
SMARCD2-201ENST00000225742 ERVV-1B6SEH8 477 aa25.79■■□□□ 1.72
SMARCD2-201ENST00000225742 CYP19A1P11511 503 aaPredicted RBP25.79■■□□□ 1.72
SMARCD2-201ENST00000225742 ZAP70P43403 619 aa25.79■■□□□ 1.72
SMARCD2-201ENST00000225742 CTSWP56202 376 aa25.79■■□□□ 1.72
SMARCD2-201ENST00000225742 CAMK4Q16566 473 aa25.79■■□□□ 1.72
SMARCD2-201ENST00000225742 SASS6Q6UVJ0 657 aa25.79■■□□□ 1.72
SMARCD2-201ENST00000225742 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.79■■□□□ 1.72
SMARCD2-201ENST00000225742 ATRNO75882 1429 aa25.79■■□□□ 1.72
SMARCD2-201ENST00000225742 DDX60Q8IY21 1712 aaKnown RBP25.78■■□□□ 1.72
SMARCD2-201ENST00000225742 A0A0G2JLW4 131 aa25.78■■□□□ 1.72
SMARCD2-201ENST00000225742 FOXP2O15409 715 aa25.78■■□□□ 1.72
SMARCD2-201ENST00000225742 RRP9O43818 475 aaKnown RBP25.78■■□□□ 1.72
SMARCD2-201ENST00000225742 NR1I2O75469 434 aa25.78■■□□□ 1.72
SMARCD2-201ENST00000225742 ITGA6P23229 1130 aa25.78■■□□□ 1.72
SMARCD2-201ENST00000225742 CCT2P78371 535 aaKnown RBP25.78■■□□□ 1.72
SMARCD2-201ENST00000225742 TTLL5Q6EMB2 1281 aa25.78■■□□□ 1.72
SMARCD2-201ENST00000225742 LDHAL6AQ6ZMR3 332 aa25.78■■□□□ 1.72
SMARCD2-201ENST00000225742 FGAP02671 866 aa25.77■■□□□ 1.72
SMARCD2-201ENST00000225742 MB21D2Q8IYB1 491 aaPredicted RBP25.77■■□□□ 1.72
SMARCD2-201ENST00000225742 NCOA7Q8NI08 942 aa25.77■■□□□ 1.72
SMARCD2-201ENST00000225742 AK7Q96M32 723 aa25.77■■□□□ 1.72
SMARCD2-201ENST00000225742 CARMIL3Q8ND23 1372 aa25.77■■□□□ 1.72
SMARCD2-201ENST00000225742 AKAP11Q9UKA4 1901 aa25.77■■□□□ 1.72
SMARCD2-201ENST00000225742 SCARF1Q14162 830 aa25.77■■□□□ 1.72
SMARCD2-201ENST00000225742 HLFQ16534 295 aa25.77■■□□□ 1.72
SMARCD2-201ENST00000225742 BTG4Q9NY30 223 aa25.77■■□□□ 1.72
SMARCD2-201ENST00000225742 AP5Z1O43299 807 aa25.76■■□□□ 1.71
SMARCD2-201ENST00000225742 PDE8AO60658 829 aa25.76■■□□□ 1.71
SMARCD2-201ENST00000225742 ANO6Q4KMQ2 910 aa25.76■■□□□ 1.71
SMARCD2-201ENST00000225742 CKAP2LQ8IYA6 745 aa25.76■■□□□ 1.71
SMARCD2-201ENST00000225742 TDRD7Q8NHU6 1098 aaKnown RBP25.76■■□□□ 1.71
SMARCD2-201ENST00000225742 IRS4O14654 1257 aaPredicted RBP25.75■■□□□ 1.71
SMARCD2-201ENST00000225742 PRC1O43663 620 aa25.75■■□□□ 1.71
SMARCD2-201ENST00000225742 GREM2Q9H772 168 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms