RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 ADORA1P30542 326 aa17.22■□□□□ 0.35
SEC61B-201ENST00000223641 MPNDQ8N594 471 aa17.22■□□□□ 0.35
SEC61B-201ENST00000223641 TBC1D16Q8TBP0 767 aa17.22■□□□□ 0.35
SEC61B-201ENST00000223641 TMX4Q9H1E5 349 aaPredicted RBP17.22■□□□□ 0.35
SEC61B-201ENST00000223641 POLLQ9UGP5 575 aa17.22■□□□□ 0.35
SEC61B-201ENST00000223641 FER1L6Q2WGJ9 1857 aa17.22■□□□□ 0.35
SEC61B-201ENST00000223641 C21orf2O43822 256 aa17.21■□□□□ 0.35
SEC61B-201ENST00000223641 SOGA3Q5TF21 947 aa17.21■□□□□ 0.35
SEC61B-201ENST00000223641 PI4K2BQ8TCG2 481 aa17.21■□□□□ 0.35
SEC61B-201ENST00000223641 ZNF512BQ96KM6 892 aaPredicted RBP17.21■□□□□ 0.35
SEC61B-201ENST00000223641 ECHDC1Q9NTX5 307 aa17.21■□□□□ 0.35
SEC61B-201ENST00000223641 GGA1Q9UJY5 639 aa17.21■□□□□ 0.35
SEC61B-201ENST00000223641 RGS3P49796 1198 aa17.2■□□□□ 0.34
SEC61B-201ENST00000223641 CCDC93Q567U6 631 aa17.2■□□□□ 0.34
SEC61B-201ENST00000223641 DPP8Q6V1X1 898 aaPredicted RBP17.2■□□□□ 0.34
SEC61B-201ENST00000223641 FBXO33Q7Z6M2 555 aa17.2■□□□□ 0.34
SEC61B-201ENST00000223641 AKAP11Q9UKA4 1901 aa17.19■□□□□ 0.34
SEC61B-201ENST00000223641 MED23Q9ULK4 1368 aa17.19■□□□□ 0.34
SEC61B-201ENST00000223641 UFL1O94874 794 aa17.19■□□□□ 0.34
SEC61B-201ENST00000223641 ATP5JP18859 108 aa17.19■□□□□ 0.34
SEC61B-201ENST00000223641 KCNJ4P48050 445 aa17.19■□□□□ 0.34
SEC61B-201ENST00000223641 CCDC102BQ68D86 513 aa17.19■□□□□ 0.34
SEC61B-201ENST00000223641 TXNRD3Q86VQ6 643 aa17.19■□□□□ 0.34
SEC61B-201ENST00000223641 RTKN2Q8IZC4 609 aa17.19■□□□□ 0.34
SEC61B-201ENST00000223641 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.19■□□□□ 0.34
SEC61B-201ENST00000223641 GPATCH3Q96I76 525 aa17.19■□□□□ 0.34
SEC61B-201ENST00000223641 FAM84BQ96KN1 310 aaPredicted RBP17.19■□□□□ 0.34
SEC61B-201ENST00000223641 PSMD1Q99460 953 aa17.19■□□□□ 0.34
SEC61B-201ENST00000223641 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
SEC61B-201ENST00000223641 GOLGB1Q14789 3259 aaKnown RBP17.18■□□□□ 0.34
SEC61B-201ENST00000223641 KLRK1P26718 216 aa17.18■□□□□ 0.34
SEC61B-201ENST00000223641 ARID4AP29374 1257 aaPredicted RBP17.18■□□□□ 0.34
SEC61B-201ENST00000223641 CCDC158Q5M9N0 1113 aa17.18■□□□□ 0.34
SEC61B-201ENST00000223641 ZNF219Q9P2Y4 722 aaPredicted RBP17.18■□□□□ 0.34
SEC61B-201ENST00000223641 ERC2O15083 957 aa17.17■□□□□ 0.34
SEC61B-201ENST00000223641 GLRX3O76003 335 aaKnown RBP17.17■□□□□ 0.34
SEC61B-201ENST00000223641 PHKA1P46020 1223 aa17.17■□□□□ 0.34
SEC61B-201ENST00000223641 BCAMP50895 628 aa17.17■□□□□ 0.34
SEC61B-201ENST00000223641 TSHZ3Q63HK5 1081 aa17.17■□□□□ 0.34
SEC61B-201ENST00000223641 SRCAPQ6ZRS2 3230 aa17.17■□□□□ 0.34
SEC61B-201ENST00000223641 BCS1LQ9Y276 419 aa17.17■□□□□ 0.34
SEC61B-201ENST00000223641 C6orf229H3BNL8 230 aa17.16■□□□□ 0.34
SEC61B-201ENST00000223641 GYG1P46976 350 aa17.16■□□□□ 0.34
SEC61B-201ENST00000223641 CAVIN4Q5BKX8 364 aa17.16■□□□□ 0.34
SEC61B-201ENST00000223641 GORABQ5T7V8 394 aa17.16■□□□□ 0.34
SEC61B-201ENST00000223641 TTC22Q5TAA0 569 aa17.16■□□□□ 0.34
SEC61B-201ENST00000223641 SUPT20HQ8NEM7 779 aa17.16■□□□□ 0.34
SEC61B-201ENST00000223641 VPS33BQ9H267 617 aa17.16■□□□□ 0.34
SEC61B-201ENST00000223641 UQCRFS1P1P0C7P4 283 aa17.15■□□□□ 0.34
SEC61B-201ENST00000223641 GSPT1P15170 499 aaKnown RBP17.15■□□□□ 0.34
SEC61B-201ENST00000223641 HIBADHP31937 336 aaKnown RBP17.15■□□□□ 0.34
SEC61B-201ENST00000223641 FKBP4Q02790 459 aaKnown RBP eCLIP17.15■□□□□ 0.34
SEC61B-201ENST00000223641 GPR101Q96P66 508 aaPredicted RBP17.15■□□□□ 0.34
SEC61B-201ENST00000223641 EYA3Q99504 573 aa17.15■□□□□ 0.34
SEC61B-201ENST00000223641 LTBP3Q9NS15 1303 aa17.15■□□□□ 0.34
SEC61B-201ENST00000223641 MYH13Q9UKX3 1938 aa17.14■□□□□ 0.33
SEC61B-201ENST00000223641 MCAMP43121 646 aa17.14■□□□□ 0.33
SEC61B-201ENST00000223641 SCARF1Q14162 830 aa17.14■□□□□ 0.33
SEC61B-201ENST00000223641 WASHC4Q2M389 1173 aa17.14■□□□□ 0.33
SEC61B-201ENST00000223641 BMP2KLQ5H9B9 411 aa17.14■□□□□ 0.33
SEC61B-201ENST00000223641 TTC39AQ5SRH9 613 aa17.14■□□□□ 0.33
SEC61B-201ENST00000223641 TDRD7Q8NHU6 1098 aaKnown RBP17.14■□□□□ 0.33
SEC61B-201ENST00000223641 HAUS7Q99871 368 aa17.14■□□□□ 0.33
SEC61B-201ENST00000223641 ZC3H12CQ9C0D7 883 aaKnown RBP17.14■□□□□ 0.33
SEC61B-201ENST00000223641 NFKBIEO00221 500 aa17.13■□□□□ 0.33
SEC61B-201ENST00000223641 SEMA3EO15041 775 aa17.13■□□□□ 0.33
SEC61B-201ENST00000223641 IL1R1P14778 569 aa17.13■□□□□ 0.33
SEC61B-201ENST00000223641 KIAA2012Q0VF49 1180 aa17.13■□□□□ 0.33
SEC61B-201ENST00000223641 ZNF804AQ7Z570 1209 aa17.13■□□□□ 0.33
SEC61B-201ENST00000223641 COA1Q9GZY4 146 aa17.13■□□□□ 0.33
SEC61B-201ENST00000223641 BOLA2Q9H3K6 86 aa17.13■□□□□ 0.33
SEC61B-201ENST00000223641 CD209Q9NNX6 404 aa17.13■□□□□ 0.33
SEC61B-201ENST00000223641 WWC3Q9ULE0 1092 aa17.13■□□□□ 0.33
SEC61B-201ENST00000223641 PDS5AQ29RF7 1337 aaKnown RBP17.13■□□□□ 0.33
SEC61B-201ENST00000223641 CHD4Q14839 1912 aa17.13■□□□□ 0.33
SEC61B-201ENST00000223641 RASGRF1Q13972 1273 aa17.12■□□□□ 0.33
SEC61B-201ENST00000223641 GNL3LQ9NVN8 582 aaKnown RBP17.12■□□□□ 0.33
SEC61B-201ENST00000223641 HMG20BQ9P0W2 317 aa17.12■□□□□ 0.33
SEC61B-201ENST00000223641 RIMBP2O15034 1052 aa17.11■□□□□ 0.33
SEC61B-201ENST00000223641 VPS37DQ86XT2 251 aa17.11■□□□□ 0.33
SEC61B-201ENST00000223641 AK9Q5TCS8 1911 aa17.11■□□□□ 0.33
SEC61B-201ENST00000223641 COL1A1P02452 1464 aaPredicted RBP17.11■□□□□ 0.33
SEC61B-201ENST00000223641 ZNF646O15015 1829 aaPredicted RBP17.1■□□□□ 0.33
SEC61B-201ENST00000223641 SDSP20132 328 aa17.1■□□□□ 0.33
SEC61B-201ENST00000223641 PODNQ7Z5L7 613 aa17.1■□□□□ 0.33
SEC61B-201ENST00000223641 SPATA5Q8NB90 893 aa17.1■□□□□ 0.33
SEC61B-201ENST00000223641 TAOK3Q9H2K8 898 aa17.1■□□□□ 0.33
SEC61B-201ENST00000223641 DENND2AQ9ULE3 1009 aa17.1■□□□□ 0.33
SEC61B-201ENST00000223641 DOCK2Q92608 1830 aa17.1■□□□□ 0.33
SEC61B-201ENST00000223641 CYP2E1P05181 493 aaPredicted RBP17.09■□□□□ 0.33
SEC61B-201ENST00000223641 YBX3P16989 372 aaKnown RBP eCLIP17.09■□□□□ 0.337e-10■□□□□ 9.6
SEC61B-201ENST00000223641 ZAP70P43403 619 aa17.09■□□□□ 0.33
SEC61B-201ENST00000223641 AOC3Q16853 763 aa17.09■□□□□ 0.33
SEC61B-201ENST00000223641 PI16Q6UXB8 463 aa17.09■□□□□ 0.33
SEC61B-201ENST00000223641 COL4A5P29400 1685 aa17.09■□□□□ 0.33
SEC61B-201ENST00000223641 PSME4Q14997 1843 aa17.09■□□□□ 0.33
SEC61B-201ENST00000223641 SBF1O95248 1867 aa17.09■□□□□ 0.33
SEC61B-201ENST00000223641 CCDC88AQ3V6T2 1871 aa17.09■□□□□ 0.33
SEC61B-201ENST00000223641 SCN9AQ15858 1988 aa17.08■□□□□ 0.33
SEC61B-201ENST00000223641 MYO5AQ9Y4I1 1855 aaKnown RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms