RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 POTEJP0CG39 1038 aa13.24□□□□□ -0.29
NOD1-201ENST00000222823 PRKCSHP14314 528 aaPredicted RBP13.24□□□□□ -0.29
NOD1-201ENST00000222823 ATP6V1AP38606 617 aa13.24□□□□□ -0.29
NOD1-201ENST00000222823 SLC4A8Q2Y0W8 1093 aa13.24□□□□□ -0.29
NOD1-201ENST00000222823 PYM1Q9BRP8 204 aaKnown RBP13.24□□□□□ -0.29
NOD1-201ENST00000222823 RRP9O43818 475 aaKnown RBP13.23□□□□□ -0.29
NOD1-201ENST00000222823 KIAA0754O94854 1291 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 CETN2P41208 172 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 LRSAM1Q6UWE0 723 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 Q6ZUG5 572 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 USO1O60763 962 aaKnown RBP13.23□□□□□ -0.29
NOD1-201ENST00000222823 HLA-DOAP06340 250 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 HOXB7P09629 217 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 IL2RBP14784 551 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 NMIQ13287 307 aaPredicted RBP13.23□□□□□ -0.29
NOD1-201ENST00000222823 IP6K1Q92551 441 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 ACSBG1Q96GR2 724 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 SETDB2Q96T68 719 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 CNNM2Q9H8M5 875 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 PAG1Q9NWQ8 432 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 CNPY2Q9Y2B0 182 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 AOX1Q06278 1338 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 KCNG4Q8TDN1 519 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 DCAF5Q96JK2 942 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 NIP7Q9Y221 180 aaKnown RBP eCLIP13.23□□□□□ -0.29
NOD1-201ENST00000222823 SLC4A4Q9Y6R1 1079 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 DDB1Q16531 1140 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 FEZ1Q99689 392 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 CABP5Q9NP86 173 aa13.23□□□□□ -0.29
NOD1-201ENST00000222823 PTPRMP28827 1452 aa13.22□□□□□ -0.29
NOD1-201ENST00000222823 LTKP29376 864 aa13.22□□□□□ -0.29
NOD1-201ENST00000222823 USP48Q86UV5 1035 aa13.22□□□□□ -0.29
NOD1-201ENST00000222823 DDX21Q9NR30 783 aaKnown RBP eCLIP13.22□□□□□ -0.29
NOD1-201ENST00000222823 DIP2CQ9Y2E4 1556 aa13.22□□□□□ -0.29
NOD1-201ENST00000222823 DESP17661 470 aa13.22□□□□□ -0.29
NOD1-201ENST00000222823 PAFAH1B1P43034 410 aa13.22□□□□□ -0.29
NOD1-201ENST00000222823 RTN1Q16799 776 aa13.22□□□□□ -0.29
NOD1-201ENST00000222823 SIRT2Q8IXJ6 389 aa13.22□□□□□ -0.29
NOD1-201ENST00000222823 SMARCC1Q92922 1105 aaPredicted RBP13.22□□□□□ -0.29
NOD1-201ENST00000222823 DACT1Q9NYF0 836 aa13.22□□□□□ -0.29
NOD1-201ENST00000222823 CPSF1Q10570 1443 aaKnown RBP13.22□□□□□ -0.29
NOD1-201ENST00000222823 CASQ1P31415 396 aa13.22□□□□□ -0.29
NOD1-201ENST00000222823 TAF3Q5VWG9 929 aa13.22□□□□□ -0.29
NOD1-201ENST00000222823 NAA16Q6N069 864 aaPredicted RBP13.22□□□□□ -0.29
NOD1-201ENST00000222823 PRR36Q9H6K5 1346 aa13.21□□□□□ -0.29
NOD1-201ENST00000222823 LRRC7Q96NW7 1537 aa13.21□□□□□ -0.29
NOD1-201ENST00000222823 F13A1P00488 732 aa13.21□□□□□ -0.29
NOD1-201ENST00000222823 DNM1Q05193 864 aaKnown RBP13.21□□□□□ -0.29
NOD1-201ENST00000222823 TCERG1LQ5VWI1 586 aa13.21□□□□□ -0.29
NOD1-201ENST00000222823 PLEKHG1Q9ULL1 1385 aa13.21□□□□□ -0.29
NOD1-201ENST00000222823 ANKRD62A6NC57 917 aa13.21□□□□□ -0.29
NOD1-201ENST00000222823 BMP15O95972 392 aa13.21□□□□□ -0.29
NOD1-201ENST00000222823 IFIT1BQ5T764 474 aaKnown RBP13.21□□□□□ -0.29
NOD1-201ENST00000222823 MRPS27Q92552 414 aaKnown RBP13.21□□□□□ -0.29
NOD1-201ENST00000222823 ZC3H13Q5T200 1668 aaKnown RBP13.21□□□□□ -0.3
NOD1-201ENST00000222823 USP6P35125 1406 aa13.21□□□□□ -0.3
NOD1-201ENST00000222823 ARHGEF40Q8TER5 1519 aa13.21□□□□□ -0.3
NOD1-201ENST00000222823 GSTO1P78417 241 aa13.21□□□□□ -0.3
NOD1-201ENST00000222823 CCDC40Q4G0X9 1142 aa13.21□□□□□ -0.3
NOD1-201ENST00000222823 WDR78Q5VTH9 848 aa13.21□□□□□ -0.3
NOD1-201ENST00000222823 ZNF622Q969S3 477 aaKnown RBP eCLIP13.21□□□□□ -0.3
NOD1-201ENST00000222823 MROH2AA6NES4 1674 aa13.21□□□□□ -0.3
NOD1-201ENST00000222823 ROBO2Q9HCK4 1378 aa13.2□□□□□ -0.3
NOD1-201ENST00000222823 N4BP3O15049 544 aa13.2□□□□□ -0.3
NOD1-201ENST00000222823 PRC1O43663 620 aa13.2□□□□□ -0.3
NOD1-201ENST00000222823 DNA2P51530 1060 aa13.2□□□□□ -0.3
NOD1-201ENST00000222823 TRMT1LQ7Z2T5 733 aaKnown RBP13.2□□□□□ -0.3
NOD1-201ENST00000222823 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
NOD1-201ENST00000222823 PNMA6EA0A0J9YXQ4 647 aa13.2□□□□□ -0.3
NOD1-201ENST00000222823 FAM200AQ8TCP9 573 aa13.2□□□□□ -0.3
NOD1-201ENST00000222823 EHMT1Q9H9B1 1298 aa13.2□□□□□ -0.3
NOD1-201ENST00000222823 RNMTO43148 476 aaKnown RBP13.2□□□□□ -0.3
NOD1-201ENST00000222823 GNAQP50148 359 aa13.2□□□□□ -0.3
NOD1-201ENST00000222823 AK2P54819 239 aa13.2□□□□□ -0.3
NOD1-201ENST00000222823 CETN1Q12798 172 aa13.2□□□□□ -0.3
NOD1-201ENST00000222823 PPP4R3AQ6IN85 833 aa13.2□□□□□ -0.3
NOD1-201ENST00000222823 LUZP1Q86V48 1076 aa13.2□□□□□ -0.3
NOD1-201ENST00000222823 HELBQ8NG08 1087 aaPredicted RBP13.2□□□□□ -0.3
NOD1-201ENST00000222823 MAP9Q49MG5 647 aa13.19□□□□□ -0.3
NOD1-201ENST00000222823 PPLO60437 1756 aa13.19□□□□□ -0.3
NOD1-201ENST00000222823 MYO3AQ8NEV4 1616 aa13.19□□□□□ -0.3
NOD1-201ENST00000222823 TSPY3P0CV98 308 aa13.19□□□□□ -0.3
NOD1-201ENST00000222823 TSPY8P0CW00 308 aa13.19□□□□□ -0.3
NOD1-201ENST00000222823 CREB3L3Q68CJ9 461 aa13.19□□□□□ -0.3
NOD1-201ENST00000222823 UTP14AQ9BVJ6 771 aaKnown RBP13.19□□□□□ -0.3
NOD1-201ENST00000222823 IRS4O14654 1257 aaPredicted RBP13.19□□□□□ -0.3
NOD1-201ENST00000222823 RNF113AO15541 343 aaKnown RBP13.19□□□□□ -0.3
NOD1-201ENST00000222823 ST5P78524 1137 aa13.19□□□□□ -0.3
NOD1-201ENST00000222823 MYOM1P52179 1685 aa13.18□□□□□ -0.3
NOD1-201ENST00000222823 GOLGA6L9A6NEM1 432 aa13.18□□□□□ -0.3
NOD1-201ENST00000222823 MARCKSP29966 332 aaPredicted RBP13.18□□□□□ -0.3
NOD1-201ENST00000222823 TFCP2Q12800 502 aa13.18□□□□□ -0.3
NOD1-201ENST00000222823 ZRSR2Q15696 482 aaKnown RBP13.18□□□□□ -0.3
NOD1-201ENST00000222823 TOM1O60784 492 aa13.18□□□□□ -0.3
NOD1-201ENST00000222823 CCDC178Q5BJE1 867 aa13.18□□□□□ -0.3
NOD1-201ENST00000222823 SCLT1Q96NL6 688 aa13.18□□□□□ -0.3
NOD1-201ENST00000222823 OSBPL3Q9H4L5 887 aa13.18□□□□□ -0.3
NOD1-201ENST00000222823 GOLGA6L7A0A1B0GV03 622 aa13.18□□□□□ -0.3
NOD1-201ENST00000222823 UBASH3AP57075 661 aa13.18□□□□□ -0.3
NOD1-201ENST00000222823 SNW1Q13573 536 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms