RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
DNMT3B-201ENST00000201963 PALD1Q9ULE6 856 aa13.33□□□□□ -0.28
DNMT3B-201ENST00000201963 ZSCAN16Q9H4T2 348 aaPredicted RBP13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 A0A087WZG4 1122 aa13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 UBASH3AP57075 661 aa13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 ZNHIT6Q9NWK9 470 aaKnown RBP13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 MYO3AQ8NEV4 1616 aa13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 XBP1P17861 261 aa13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 CDR1P51861 262 aa13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 U3KPZ7 1027 aaPredicted RBP13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 ZNF75DP51815 510 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 CCDC57Q2TAC2 916 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 RAB11FIP4Q86YS3 637 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 ZBTB7AO95365 584 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 IFNKQ9P0W0 207 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 RSPH14Q9UHP6 348 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 PARP3Q9Y6F1 533 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 CAPN2P17655 700 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 GTF2A1P52655 376 aaPredicted RBP13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 SMIM5Q71RC9 77 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 UBE3BQ7Z3V4 1068 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 SLC52A2Q9HAB3 445 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 RAI14Q9P0K7 980 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 LRRC7Q96NW7 1537 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 MST1RQ04912 1400 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 LOC102724428A0A0B4J2F2 783 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 LIG1P18858 919 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 SIK1P57059 783 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 CNNM3Q8NE01 707 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 TMEM131LA2VDJ0 1609 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 PHACTR2O75167 634 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 SART3Q15020 963 aaKnown RBP13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 UTP14CQ5TAP6 766 aaKnown RBP13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 CCDC181Q5TID7 509 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 G2E3Q7L622 706 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 TRIM22Q8IYM9 498 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 ZNF215Q9UL58 517 aaPredicted RBP13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 C6orf229H3BNL8 230 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 RAD21O60216 631 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 CEP89Q96ST8 783 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 MAP3K2Q9Y2U5 619 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 REREQ9P2R6 1566 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 HMGB2P26583 209 aaKnown RBP13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 BRMS1Q9HCU9 246 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 MAGEC2Q9UBF1 373 aaPredicted RBP13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 MRPS27Q92552 414 aaKnown RBP13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 ANKIB1Q9P2G1 1089 aa13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 CTNNA3Q9UI47 895 aa13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 CCDC158Q5M9N0 1113 aa13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 SNX14Q9Y5W7 946 aa13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 VPS72Q15906 364 aa13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 VPS53Q5VIR6 699 aa13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 IL17REQ8NFR9 667 aa13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 CYP27B1O15528 508 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 R3HDM1Q15032 1099 aaKnown RBP13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 TTC39AQ5SRH9 613 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 KIAA1328Q86T90 577 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 CCDC82Q8N4S0 544 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 NUP133Q8WUM0 1156 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 ORC3Q9UBD5 711 aaPredicted RBP13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 CCDC148Q8NFR7 591 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 RASSF4Q9H2L5 321 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 MTMR7Q9Y216 660 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 TULP4Q9NRJ4 1543 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 ARHGAP23Q9P227 1491 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 SHTN1A0MZ66 631 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 GOLGA6L9A6NEM1 432 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 CDKL5O76039 1030 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 HMGB1P09429 215 aaKnown RBP13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 ZSCAN25Q6NSZ9 544 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 ATP7BP35670 1465 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 GOLGA8BA8MQT2 603 aa13.27□□□□□ -0.28
DNMT3B-201ENST00000201963 GPR162Q16538 588 aa13.27□□□□□ -0.28
DNMT3B-201ENST00000201963 IMMTQ16891 758 aaKnown RBP13.27□□□□□ -0.28
DNMT3B-201ENST00000201963 CREB3L3Q68CJ9 461 aa13.27□□□□□ -0.28
DNMT3B-201ENST00000201963 KRBA2Q6ZNG9 492 aa13.27□□□□□ -0.28
DNMT3B-201ENST00000201963 RBM5P52756 815 aaKnown RBP eCLIP13.27□□□□□ -0.287e-10■■■■■ 35.1
DNMT3B-201ENST00000201963 EVCP57679 992 aa13.27□□□□□ -0.28
DNMT3B-201ENST00000201963 SRRTQ9BXP5 876 aaKnown RBP13.27□□□□□ -0.28
DNMT3B-201ENST00000201963 PNPLA6Q8IY17 1366 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 MNAT1P51948 309 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 IRX3P78415 501 aaPredicted RBP13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 Q6ZUG5 572 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 KIAA1524Q8TCG1 905 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 PDLIM2Q96JY6 352 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 HYPKQ9NX55 129 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 HMG20BQ9P0W2 317 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 PA2G4Q9UQ80 394 aaKnown RBP13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 MAP9Q49MG5 647 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 PIGBQ92521 554 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 UTP14AQ9BVJ6 771 aaKnown RBP13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 VPS18Q9P253 973 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 SLIT1O75093 1534 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 HAND2P61296 217 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 RUFY3Q7L099 469 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 CEP126Q9P2H0 1117 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 IGHMBP2P38935 993 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms