RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Nlrp4eQ66X19 978 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Lrit1Q8K099 624 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Ttc21aQ8C0S4 1314 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Zscan29E9Q5B4 869 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Zkscan4Q5SZT6 480 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Prpf4bQ61136 1007 aaKnown RBP8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Siglec1Q62230 1695 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Map2P20357 1828 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Nedd9O35177 833 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Cfdp1O88271 295 aaKnown RBP8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Slc8a1P70414 970 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 TmpoQ61033 693 aaKnown RBP8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Samm50Q8BGH2 469 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Slc5a1Q8C3K6 665 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 MrgbpQ9DAT2 204 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Cct2P80314 535 aaKnown RBP8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Nap1l3Q794H2 544 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Hook3Q8BUK6 718 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Gtpbp10Q8K013 366 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Thoc1Q8R3N6 657 aaKnown RBP8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Bloc1s4Q8VED2 215 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Ginm1Q91WR6 327 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Zkscan7E9PVW1 718 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Kif5bQ61768 963 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Cand2Q6ZQ73 1235 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Calr3Q9D9Q6 380 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Tnrc6cQ3UHC0 1690 aaKnown RBP8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Bcl9lQ67FY2 1494 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Sstr3P30935 428 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Golga2Q921M4 999 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Fam76aQ922G2 307 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Klc4Q9DBS5 619 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Riok3Q9DBU3 519 aaKnown RBP8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Abt1Q9QYL7 269 aaKnown RBP8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Kif9Q9WV04 790 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Ubr1O70481 1757 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Rtf1A2AQ19 715 aaKnown RBP8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 GalcP54818 684 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Frat1P70339 274 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Kcnb1Q03717 857 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Cavin2Q63918 418 aaKnown RBP8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Basp1Q91XV3 226 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 SncbQ91ZZ3 133 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Ltbp1Q8CG19 1712 aa8.23□□□□□ -1.09
Chm-202ENSMUST00000113388 Tex13c2A0A0G2JGA3 530 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Triml2E9PW10 424 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Mtx1P47802 317 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Gsdma3Q5Y4Y6 464 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Atl2Q6PA06 583 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Unc45aQ99KD5 944 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Clip2Q9Z0H8 1047 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Proca1B0QZF7 307 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Fbxo18Q8K2I9 1042 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Chchd3Q9CRB9 227 aaKnown RBP8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Zcrb1Q9CZ96 217 aaKnown RBP8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Ttc41Q692V3 1318 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Cnbd1B1AWM0 430 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Gm44503E9PYU5 387 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Mcm3P25206 812 aaKnown RBP8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Ccdc85cE9Q6B2 420 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 GscQ02591 256 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Q32P12 615 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Ggnbp2Q5SV77 696 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Pank1Q8K4K6 548 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Klc3Q91W40 508 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Tfip11Q9ERA6 838 aaKnown RBP8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Atp1a4Q9WV27 1032 aa8.22□□□□□ -1.09
Chm-202ENSMUST00000113388 Gm18336A0A140LIU8 765 aa8.21□□□□□ -1.09
Chm-202ENSMUST00000113388 Sept7O55131 436 aa8.21□□□□□ -1.09
Chm-202ENSMUST00000113388 DesP31001 469 aaKnown RBP8.21□□□□□ -1.09
Chm-202ENSMUST00000113388 Gm1604bQ3TRG0 118 aa8.21□□□□□ -1.09
Chm-202ENSMUST00000113388 SltmQ8CH25 1031 aaKnown RBP8.21□□□□□ -1.09
Chm-202ENSMUST00000113388 Ebag9Q9D0V7 213 aa8.21□□□□□ -1.09
Chm-202ENSMUST00000113388 Lmbr1Q9JIT0 490 aa8.21□□□□□ -1.09
Chm-202ENSMUST00000113388 Kdm2bQ6P1G2 1309 aa8.21□□□□□ -1.09
Chm-202ENSMUST00000113388 Shank2Q80Z38 1476 aa8.21□□□□□ -1.09
Chm-202ENSMUST00000113388 Gcom1E9PZ54 550 aa8.21□□□□□ -1.09
Chm-202ENSMUST00000113388 Akap11E9Q777 1895 aa8.21□□□□□ -1.09
Chm-202ENSMUST00000113388 Bcl2l13P59017 434 aa8.21□□□□□ -1.09
Chm-202ENSMUST00000113388 Eif3bQ8JZQ9 803 aaKnown RBP8.21□□□□□ -1.09
Chm-202ENSMUST00000113388 Kifc2O08672 792 aa8.21□□□□□ -1.1
Chm-202ENSMUST00000113388 Kif5cP28738 956 aaKnown RBP8.21□□□□□ -1.1
Chm-202ENSMUST00000113388 Tmed1Q3V009 227 aa8.21□□□□□ -1.1
Chm-202ENSMUST00000113388 Mum1l1Q4VA55 681 aa8.21□□□□□ -1.1
Chm-202ENSMUST00000113388 Cep112Q5PR68 954 aa8.21□□□□□ -1.1
Chm-202ENSMUST00000113388 Ino80bQ99PT3 375 aaKnown RBP8.21□□□□□ -1.1
Chm-202ENSMUST00000113388 Spout1Q3UHX9 385 aaKnown RBP8.21□□□□□ -1.1
Chm-202ENSMUST00000113388 Clul1Q3ZRW6 464 aa8.21□□□□□ -1.1
Chm-202ENSMUST00000113388 Asic4Q7TNS7 539 aa8.21□□□□□ -1.1
Chm-202ENSMUST00000113388 Slu7Q8BHJ9 585 aa8.21□□□□□ -1.1
Chm-202ENSMUST00000113388 Kdm6aO70546 1401 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Exoc3l2D3YUP5 789 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Tbc1d1Q60949 1255 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Trim37Q6PCX9 961 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Ankrd13dQ6PD24 605 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Cfap100Q80VN0 613 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Srgap3Q812A2 1099 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Pdzd9Q9D9M4 266 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 RpsaP14206 295 aaKnown RBP8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Ell2Q3UKU1 639 aa8.2□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms