RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Cep170Q6A065 1588 aa18.18■□□□□ 0.5
Ret-202ENSMUST00000088790 FancaQ9JL70 1439 aa18.18■□□□□ 0.5
Ret-202ENSMUST00000088790 Dctn1O08788 1281 aa18.18■□□□□ 0.5
Ret-202ENSMUST00000088790 Tbc1d8Q9Z1A9 1134 aa18.18■□□□□ 0.5
Ret-202ENSMUST00000088790 Cfap65Q3V0B4 1847 aa18.18■□□□□ 0.5
Ret-202ENSMUST00000088790 Uggt1Q6P5E4 1551 aa18.18■□□□□ 0.5
Ret-202ENSMUST00000088790 Myl3P09542 204 aa18.18■□□□□ 0.5
Ret-202ENSMUST00000088790 Sun3Q5SS91 320 aa18.18■□□□□ 0.5
Ret-202ENSMUST00000088790 Jade2Q6ZQF7 829 aa18.18■□□□□ 0.5
Ret-202ENSMUST00000088790 Cc2d1bQ8BRN9 848 aa18.18■□□□□ 0.5
Ret-202ENSMUST00000088790 Rnf34Q99KR6 376 aa18.18■□□□□ 0.5
Ret-202ENSMUST00000088790 Ttc5Q99LG4 440 aa18.18■□□□□ 0.5
Ret-202ENSMUST00000088790 Aox1O54754 1333 aa18.18■□□□□ 0.5
Ret-202ENSMUST00000088790 Esco1Q69Z69 843 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Ccdc181Q80ZU5 509 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Pcdhb22Q91XZ8 794 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Mroh2aD3Z750 1679 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Myo1bP46735 1107 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Tlr7P58681 1050 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 RragbQ6NTA4 374 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Slc35g1Q8BY79 368 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Hs2st1Q8R3H7 356 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Abcc3B2RX12 1523 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Kdm5aQ3UXZ9 1690 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Tspyl3Q3UYP3 334 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Ift88Q61371 824 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Brd3Q8K2F0 726 aaKnown RBP18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Plcd1Q8R3B1 756 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Nol7Q9D7Z3 254 aaKnown RBP18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 9230110C19RikQ8CC70 267 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Mrps25Q9D125 171 aaKnown RBP18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Mipol1Q9D9F8 279 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Irs4Q9Z0Y7 1216 aa18.17■□□□□ 0.5
Ret-202ENSMUST00000088790 Nlrp9aQ66X03 949 aa18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Luc7l2Q7TNC4 392 aaKnown RBP18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Ddx10Q80Y44 875 aaKnown RBP18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Miga2Q8BK03 593 aa18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Ccdc12Q8R344 166 aaKnown RBP18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Pkd2l2Q9JLG4 621 aa18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Def6Q8C2K1 630 aa18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Mrvi1Q9WUX5 899 aaKnown RBP18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Syde2E9PUP1 1314 aa18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Igsf1Q7TQA1 1317 aa18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Prl7a2O54831 253 aa18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Calm1P0DP26 149 aaKnown RBP18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Calm2P0DP27 149 aaKnown RBP18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Calm3P0DP28 149 aaKnown RBP18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Terf1P70371 421 aa18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Leo1Q5XJE5 667 aa18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Ano6Q6P9J9 911 aa18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Tekt3Q6X6Z7 490 aa18.16■□□□□ 0.5
Ret-202ENSMUST00000088790 Ddx17Q501J6 650 aaKnown RBP18.15■□□□□ 0.5
Ret-202ENSMUST00000088790 Rnf187Q8BFX1 236 aa18.15■□□□□ 0.5
Ret-202ENSMUST00000088790 Clasp1Q80TV8 1535 aaKnown RBP18.15■□□□□ 0.5
Ret-202ENSMUST00000088790 Ankrd40Q5SUE8 363 aa18.15■□□□□ 0.5
Ret-202ENSMUST00000088790 Prdm1Q60636 856 aa18.15■□□□□ 0.5
Ret-202ENSMUST00000088790 Sgsm2Q80U12 1005 aa18.15■□□□□ 0.5
Ret-202ENSMUST00000088790 SdsQ8VBT2 327 aa18.15■□□□□ 0.5
Ret-202ENSMUST00000088790 Anxa1P10107 346 aaKnown RBP18.14■□□□□ 0.5
Ret-202ENSMUST00000088790 Ssrp1Q08943 708 aaKnown RBP18.14■□□□□ 0.5
Ret-202ENSMUST00000088790 Cul5Q9D5V5 780 aa18.14■□□□□ 0.5
Ret-202ENSMUST00000088790 Rims1Q99NE5 1463 aa18.14■□□□□ 0.49
Ret-202ENSMUST00000088790 MarcksP26645 309 aaKnown RBP18.14■□□□□ 0.49
Ret-202ENSMUST00000088790 Tgfb1i1Q62219 461 aa18.14■□□□□ 0.49
Ret-202ENSMUST00000088790 Clec11aO88200 328 aa18.14■□□□□ 0.49
Ret-202ENSMUST00000088790 Ccdc94Q9D6J3 314 aa18.14■□□□□ 0.49
Ret-202ENSMUST00000088790 Nlrp1aQ2LKU9 1182 aa18.13■□□□□ 0.49
Ret-202ENSMUST00000088790 Paf1Q8K2T8 535 aa18.13■□□□□ 0.49
Ret-202ENSMUST00000088790 DmtnQ9WV69 405 aa18.13■□□□□ 0.49
Ret-202ENSMUST00000088790 MycnP03966 462 aaKnown RBP18.13■□□□□ 0.49
Ret-202ENSMUST00000088790 Lrrc43Q3V0L5 667 aa18.13■□□□□ 0.49
Ret-202ENSMUST00000088790 Rapgef3Q8VCC8 918 aa18.13■□□□□ 0.49
Ret-202ENSMUST00000088790 Lrrc2Q8VDB8 371 aa18.13■□□□□ 0.49
Ret-202ENSMUST00000088790 Arhgef1Q61210 920 aaKnown RBP18.13■□□□□ 0.49
Ret-202ENSMUST00000088790 LarsQ8BMJ2 1178 aa18.13■□□□□ 0.49
Ret-202ENSMUST00000088790 Mrpl12Q9DB15 201 aaKnown RBP18.13■□□□□ 0.49
Ret-202ENSMUST00000088790 Arhgap23Q69ZH9 1483 aa18.13■□□□□ 0.49
Ret-202ENSMUST00000088790 Kifc2O08672 792 aa18.13■□□□□ 0.49
Ret-202ENSMUST00000088790 Atp8a2P98200 1148 aa18.13■□□□□ 0.49
Ret-202ENSMUST00000088790 Tpcn2Q8BWC0 731 aa18.13■□□□□ 0.49
Ret-202ENSMUST00000088790 Cdca7lQ922M5 438 aa18.13■□□□□ 0.49
Ret-202ENSMUST00000088790 PtprtQ99M80 1454 aa18.12■□□□□ 0.49
Ret-202ENSMUST00000088790 MycbpapQ5SUV2 932 aa18.12■□□□□ 0.49
Ret-202ENSMUST00000088790 Myl6bQ8CI43 207 aa18.12■□□□□ 0.49
Ret-202ENSMUST00000088790 Tmem119Q8R138 280 aa18.12■□□□□ 0.49
Ret-202ENSMUST00000088790 Krt79Q8VED5 531 aa18.12■□□□□ 0.49
Ret-202ENSMUST00000088790 AmfrQ9R049 643 aa18.12■□□□□ 0.49
Ret-202ENSMUST00000088790 Ddx27Q921N6 760 aaKnown RBP18.12■□□□□ 0.49
Ret-202ENSMUST00000088790 Fbln2P37889 1221 aa18.12■□□□□ 0.49
Ret-202ENSMUST00000088790 Cacna2d4Q5RJF7 1116 aa18.12■□□□□ 0.49
Ret-202ENSMUST00000088790 Dmrtc1Q9D9R7 182 aa18.12■□□□□ 0.49
Ret-202ENSMUST00000088790 Foxo3Q9WVH4 672 aa18.12■□□□□ 0.49
Ret-202ENSMUST00000088790 Gm28047Q3US59 414 aa18.11■□□□□ 0.49
Ret-202ENSMUST00000088790 Nfxl1E9Q8I7 918 aaKnown RBP18.11■□□□□ 0.49
Ret-202ENSMUST00000088790 St5Q924W7 1134 aa18.11■□□□□ 0.49
Ret-202ENSMUST00000088790 CpvlQ9D3S9 478 aa18.11■□□□□ 0.49
Ret-202ENSMUST00000088790 Q9D5Q8 446 aa18.11■□□□□ 0.49
Ret-202ENSMUST00000088790 Naa16Q9DBB4 864 aa18.11■□□□□ 0.49
Ret-202ENSMUST00000088790 Myl10Q62082 202 aa18.11■□□□□ 0.49
Ret-202ENSMUST00000088790 Taf5lQ91WQ5 589 aa18.11■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms