RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Slc51aQ8R000 340 aa10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 StrbpQ91WM1 672 aaKnown RBP10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 Gja5Q01231 358 aa10.42□□□□□ -0.74
Trim39-201ENSMUST00000042717 Mrps27Q8BK72 415 aaKnown RBP10.42□□□□□ -0.74
Trim39-201ENSMUST00000042717 AidaQ8C4Q6 305 aa10.42□□□□□ -0.74
Trim39-201ENSMUST00000042717 Ppm1fQ8CGA0 452 aa10.42□□□□□ -0.74
Trim39-201ENSMUST00000042717 Ube3bQ9ES34 1070 aa10.42□□□□□ -0.74
Trim39-201ENSMUST00000042717 Mroh6V9GX81 722 aa10.42□□□□□ -0.74
Trim39-201ENSMUST00000042717 Npc1l1Q6T3U4 1333 aa10.42□□□□□ -0.74
Trim39-201ENSMUST00000042717 Ppp1r21Q3TDD9 780 aa10.42□□□□□ -0.74
Trim39-201ENSMUST00000042717 SfswapQ3USH5 945 aaKnown RBP10.42□□□□□ -0.74
Trim39-201ENSMUST00000042717 Sh3bp5lQ99LH9 392 aa10.42□□□□□ -0.74
Trim39-201ENSMUST00000042717 NsmfQ99NF2 532 aa10.42□□□□□ -0.74
Trim39-201ENSMUST00000042717 Glg1Q61543 1175 aaKnown RBP10.42□□□□□ -0.74
Trim39-201ENSMUST00000042717 Pdzrn3Q69ZS0 1063 aa10.42□□□□□ -0.74
Trim39-201ENSMUST00000042717 Cdca7lQ922M5 438 aa10.42□□□□□ -0.74
Trim39-201ENSMUST00000042717 Prl7a2O54831 253 aa10.41□□□□□ -0.74
Trim39-201ENSMUST00000042717 Atp6v0a2P15920 856 aa10.41□□□□□ -0.74
Trim39-201ENSMUST00000042717 Ppil4Q9CXG3 492 aaKnown RBP10.41□□□□□ -0.74
Trim39-201ENSMUST00000042717 Cyp27a1Q9DBG1 533 aa10.41□□□□□ -0.74
Trim39-201ENSMUST00000042717 Fbxo3Q9DC63 480 aa10.41□□□□□ -0.74
Trim39-201ENSMUST00000042717 Izumo3A6PWV3 263 aa10.41□□□□□ -0.74
Trim39-201ENSMUST00000042717 Aknad1E9Q8N6 675 aa10.41□□□□□ -0.74
Trim39-201ENSMUST00000042717 Psd3Q2PFD7 1037 aa10.41□□□□□ -0.74
Trim39-201ENSMUST00000042717 Rbm15bQ6PHZ5 887 aaKnown RBP10.41□□□□□ -0.74
Trim39-201ENSMUST00000042717 Tmem67Q8BR76 992 aa10.41□□□□□ -0.74
Trim39-201ENSMUST00000042717 Pof1bQ8K4L4 587 aa10.41□□□□□ -0.74
Trim39-201ENSMUST00000042717 Bmp2kQ91Z96 1138 aa10.41□□□□□ -0.74
Trim39-201ENSMUST00000042717 LlphQ9D945 130 aaKnown RBP10.41□□□□□ -0.74
Trim39-201ENSMUST00000042717 IcoslgQ9JHJ8 322 aa10.41□□□□□ -0.74
Trim39-201ENSMUST00000042717 Gdf11Q9Z1W4 405 aa10.41□□□□□ -0.74
Trim39-201ENSMUST00000042717 Hspd1P63038 573 aaKnown RBP10.4□□□□□ -0.74
Trim39-201ENSMUST00000042717 Kif20aP97329 887 aa10.4□□□□□ -0.74
Trim39-201ENSMUST00000042717 Rnf20Q5DTM8 973 aa10.4□□□□□ -0.74
Trim39-201ENSMUST00000042717 Fam170aQ66LM6 333 aa10.4□□□□□ -0.74
Trim39-201ENSMUST00000042717 Spty2d1Q68FG3 682 aa10.4□□□□□ -0.74
Trim39-201ENSMUST00000042717 Ube3cQ80U95 1083 aa10.4□□□□□ -0.74
Trim39-201ENSMUST00000042717 Ubxn10Q8BG34 277 aa10.4□□□□□ -0.74
Trim39-201ENSMUST00000042717 AnlnQ8K298 1121 aaKnown RBP10.4□□□□□ -0.74
Trim39-201ENSMUST00000042717 Ppp4r3bQ922R5 820 aa10.4□□□□□ -0.74
Trim39-201ENSMUST00000042717 Znfx1Q8R151 1909 aaKnown RBP10.4□□□□□ -0.74
Trim39-201ENSMUST00000042717 Ankrd63A2ARS0 390 aa10.4□□□□□ -0.74
Trim39-201ENSMUST00000042717 Rhbdl3P58873 404 aa10.4□□□□□ -0.74
Trim39-201ENSMUST00000042717 Prom2Q3UUY6 835 aa10.4□□□□□ -0.74
Trim39-201ENSMUST00000042717 Abtb2Q7TQI7 1024 aa10.4□□□□□ -0.74
Trim39-201ENSMUST00000042717 EvplQ9D952 2035 aa10.4□□□□□ -0.74
Trim39-201ENSMUST00000042717 CrcpO35427 148 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Prl7d1P04769 244 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Anapc15P60007 132 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Slc7a3P70423 618 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Appbp2Q9DAX9 585 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Col22a1E9Q7P1 1613 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Spata31d1bE9QA57 1361 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Lrp5Q91VN0 1614 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Krt24A1L317 512 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Pet2A2AHY8 747 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Chrna5Q2MKA5 467 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 RarsQ9D0I9 660 aaKnown RBP10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Q9D9S1 216 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Irgm2A0A140LIF8 407 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Cyp2d9P11714 504 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Mre11Q61216 706 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Filip1lQ6P6L0 1131 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Tti2Q8BGV4 512 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Cfap69Q8BH53 942 aa10.39□□□□□ -0.75
Trim39-201ENSMUST00000042717 Atf7Q8R0S1 413 aa10.38□□□□□ -0.75
Trim39-201ENSMUST00000042717 MthfsQ9D110 203 aa10.38□□□□□ -0.75
Trim39-201ENSMUST00000042717 FliiQ9JJ28 1271 aa10.38□□□□□ -0.75
Trim39-201ENSMUST00000042717 Slfn1Q9Z0I7 337 aa10.38□□□□□ -0.75
Trim39-201ENSMUST00000042717 Dhx16G3X8X0 1044 aaKnown RBP10.38□□□□□ -0.75
Trim39-201ENSMUST00000042717 Fhdc1Q3ULZ2 1149 aa10.38□□□□□ -0.75
Trim39-201ENSMUST00000042717 Cdcp1Q5U462 833 aa10.38□□□□□ -0.75
Trim39-201ENSMUST00000042717 Ints3Q7TPD0 1041 aaKnown RBP10.38□□□□□ -0.75
Trim39-201ENSMUST00000042717 Add2Q9QYB8 725 aa10.38□□□□□ -0.75
Trim39-201ENSMUST00000042717 Stat5bP42232 786 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Cyp24a1Q64441 514 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Sgsm2Q80U12 1005 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 KinQ8K339 391 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 OscarQ8VBT3 265 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Pes1Q9EQ61 584 aaKnown RBP10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Sned1Q70E20 1403 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Cfap44E9Q5M6 1843 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 A0A1W2P7S8 802 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Atp6v1aP50516 617 aaKnown RBP10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Pkp1P97350 728 aaKnown RBP10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Cdc5lQ6A068 802 aaKnown RBP10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Pcdhb9E9Q5G2 828 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Kifc2O08672 792 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Casq1O09165 405 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Terf1P70371 421 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Ccdc51Q3URS9 406 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Gm5592Q3V0A6 857 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Agtpbp1Q641K1 1218 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Pold4Q9CWP8 107 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Mrpl12Q9DB15 201 aaKnown RBP10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Myo3bQ1EG27 1305 aa10.37□□□□□ -0.75
Trim39-201ENSMUST00000042717 Abl1P00520 1123 aa10.36□□□□□ -0.75
Trim39-201ENSMUST00000042717 Rnf123Q5XPI3 1314 aa10.36□□□□□ -0.75
Trim39-201ENSMUST00000042717 Nme8Q715T0 586 aa10.36□□□□□ -0.75
Trim39-201ENSMUST00000042717 Kdm4cQ8VCD7 1054 aa10.36□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms