RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 SLC26A7Q8TE54 656 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 ABHD3Q8WU67 409 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 NRGNQ92686 78 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZHX1-C8orf76Q96EF9 292 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 ARL5BQ96KC2 179 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 NEDD4LQ96PU5 975 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR5B2Q96R09 309 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR52B2Q96RD2 323 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 SIKE1Q9BRV8 207 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 POTEKPQ9BYX7 375 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 TMEM38AQ9H6F2 299 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 ARMC7Q9H6L4 198 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 TMEM185BQ9H7F4 350 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 C12orf10Q9HB07 376 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLCO1B3Q9NPD5 702 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 NGBQ9NPG2 151 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 CTPS2Q9NRF8 586 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 MRGBPQ9NV56 204 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 CHCHD3Q9NX63 227 aaKnown RBP2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 KLHL28Q9NXS3 571 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 P2RX2Q9UBL9 471 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 CLEC4AQ9UMR7 237 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 PLEKHA6Q9Y2H5 1048 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 IFT52Q9Y366 437 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 HIVEP2P31629 2446 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZFHX3Q15911 3703 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 FN1P02751 2386 aaKnown RBP2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 AKAP9Q99996 3911 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 IGHV3OR16-10A0A075B7F0 116 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 UQCRHLA0A096LP55 91 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 TMED7-TICAM2A0A0A6YYA0 188 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 LOC102725191A0A1B0GVB3 256 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 A0A1W2PP18 115 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 CFAP73A6NFT4 308 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR5H1A6NKK0 313 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 CLDN24A6NM45 220 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 C9JVG2 144 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 PDLIM1O00151 329 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 SURF4O15260 269 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 EDF1O60869 148 aaKnown RBP2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 NPIPB7O75200 414 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 BCAS1O75363 584 aaPredicted RBP2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 VAMP5O95183 116 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 ANP32DO95626 131 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 OPN1LWP04000 364 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 BCHEP06276 602 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 CD99P14209 185 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 UQCRBP14927 111 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 GATA1P15976 413 aaPredicted RBP2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 ADRA2CP18825 462 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 CRATP43155 626 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 IDH2P48735 452 aaKnown RBP2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 CAPZA1P52907 286 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 AQP5P55064 265 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 NME5P56597 212 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 STX1BP61266 288 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 LMO4P61968 165 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC35A1P78382 337 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 MS4A2Q01362 244 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 DHODHQ02127 395 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 RBBP4Q09028 425 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC17A1Q14916 467 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 EXOC3L2Q2M3D2 409 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 TTMPQ5BVD1 217 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 TIMM23BQ5SRD1 257 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 NCMAPQ5T1S8 102 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 METTL21CQ5VZV1 264 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 FBXW9Q5XUX1 488 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 FAM91A1Q658Y4 838 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 DHRS4L2Q6PKH6 230 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 C5orf46Q6UWT4 87 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 C6orf89Q6UWU4 347 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 BTNL8Q6UX41 500 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 DLEU7Q6UYE1 221 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF836Q6ZNA1 936 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 GDPGP1Q6ZNW5 385 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 OLIG3Q7RTU3 272 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 SPATA21Q7Z572 469 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 VRK2Q86Y07 508 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 MSRB3Q8IXL7 192 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 PRSS35Q8N3Z0 413 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 C17orf78Q8N4C9 275 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 TMCO5AQ8N6Q1 288 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF433Q8N7K0 673 aaPredicted RBP2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 NKAIN3Q8N8D7 197 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR9I1Q8NGQ6 314 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR52P1PQ8NH57 321 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 CKAP2Q8WWK9 683 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 TMEM45BQ96B21 275 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 S100PBPQ96BU1 408 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 DDIT4LQ96D03 193 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 PIK3IP1Q96FE7 263 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 MAGEB18Q96M61 343 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF317Q96PQ6 595 aaPredicted RBP2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 EBF4Q9BQW3 602 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 ACTR6Q9GZN1 396 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF385DQ9H6B1 395 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 ARGLU1Q9NWB6 273 aaPredicted RBP2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC25A37Q9NYZ2 338 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 EMC3Q9P0I2 261 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms