RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ZBTB49Q6ZSB9 765 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 PGAP1Q75T13 922 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 SPATC1Q76KD6 591 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 MRPL21Q7Z2W9 205 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 NAA40Q86UY6 237 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 CBR4Q8N4T8 237 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 OR8G5Q8NG78 346 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 OR2Z1Q8NG97 314 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 OR8J1Q8NGP2 316 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 TRUB1Q8WWH5 349 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 C1orf147Q96MC9 270 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 IL4I1Q96RQ9 567 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 OPA3Q9H6K4 179 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 NIPAL2Q9H841 368 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 TANC2Q9HCD6 1990 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 MEGF8Q7Z7M0 2845 aa14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 CLDN34H7C241 214 aa14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 XRCC2O43543 280 aa14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 RNASE1P07998 156 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 POLR2IP36954 125 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 CX3CR1P49238 355 aa14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 GK2Q14410 553 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 ZMYND11Q15326 602 aa14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 AADACL4Q5VUY2 407 aa14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 OR13G1Q8NGZ3 307 aa14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 ASB17Q8WXJ9 295 aa14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 EME1Q96AY2 570 aa14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 ZNF48Q96MX3 618 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 CNN2Q99439 309 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 MNTQ99583 582 aa14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 IMPAD1Q9NX62 359 aa14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 PPP1R3CQ9UQK1 317 aa14.71□□□□□ -0.05
SHKBP1-203ENST00000594298 CCDC182A6NF36 153 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 IQCF6A8MYZ5 107 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 ANXA2P07355 339 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 PPIAL4GP0DN37 164 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 ALOX5APP20292 161 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 MDH2P40926 338 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 OPRL1P41146 370 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 PAX8Q06710 450 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 BAMBIQ13145 260 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 TMED1Q13445 227 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 ESCO2Q56NI9 601 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 DEGS2Q6QHC5 323 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 KRT77Q7Z794 578 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 OR5AS1Q8N127 324 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 BCL6BQ8N143 479 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 MUC20Q8N307 709 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 OR52H1Q8NGJ2 320 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 SPRYD4Q8WW59 207 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 ITLN1Q8WWA0 313 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 RFKQ969G6 155 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 TMEM100Q9NV29 134 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 HAO2Q9NYQ3 351 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 OR5V1Q9UGF6 321 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 WARS2Q9UGM6 360 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 LRCH1Q9Y2L9 728 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 NOP16Q9Y3C1 178 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 N6AMT1Q9Y5N5 214 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 MGAM2Q2M2H8 2515 aa14.7□□□□□ -0.06
SHKBP1-203ENST00000594298 GGT3PA6NGU5 568 aa14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 TMEM178BH3BS89 294 aa14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 IFNL4K9M1U5 179 aa14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 PHYHO14832 338 aa14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 TBX1O43435 398 aa14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 CFL1P23528 166 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 RBMXP38159 391 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 IL13RA1P78552 427 aa14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 C9orf139Q6ZV77 190 aa14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 SLC25A28Q96A46 364 aa14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 HRASLS5Q96KN8 279 aa14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 DUX5Q96PT3 197 aa14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 OR2V2Q96R30 315 aa14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 MROQ9BYG7 248 aa14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 SLC22A4Q9H015 551 aa14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 GCM1Q9NP62 436 aa14.69□□□□□ -0.06
SHKBP1-203ENST00000594298 POM121CA8CG34 1229 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 CEACAM18A8MTB9 384 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 M0R129 80 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 ZNF254O75437 659 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 MRPL3P09001 348 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 WNT2P09544 360 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 SLC2A1P11166 492 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 HTR1FP30939 366 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 DDOSTP39656 456 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 MMP16P51512 607 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 PAX2Q02962 417 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 POU4F2Q12837 409 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 TIGD6Q17RP2 521 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 SNAI3Q3KNW1 292 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 ZIK1Q3SY52 487 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 BCDIN3DQ7Z5W3 292 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 FAM81AQ8TBF8 368 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 PGAM5Q96HS1 289 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 AMELYQ99218 206 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 SLC30A2Q9BRI3 323 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 MS4A7Q9GZW8 240 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 OR10A2Q9H208 303 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 RGCCQ9H4X1 137 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 UNKLQ9H9P5 680 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms