RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 TMEM246Q9BRR3 403 aa14.03□□□□□ -0.16
USB1-211ENST00000565662 ERVK-18Q9QC07 812 aa14.03□□□□□ -0.16
USB1-211ENST00000565662 NUP50Q9UKX7 468 aa14.03□□□□□ -0.16
USB1-211ENST00000565662 MPC1Q9Y5U8 109 aa14.03□□□□□ -0.16
USB1-211ENST00000565662 STAB1Q9NY15 2570 aa14.03□□□□□ -0.16
USB1-211ENST00000565662 SLC22A31A6NKX4 558 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 TMEM210A6NLX4 147 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 LGALS8O00214 317 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 ENSAO43768 121 aaKnown RBP14.02□□□□□ -0.17
USB1-211ENST00000565662 FAM20BO75063 409 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 CIB2O75838 187 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 CRISP1P54107 249 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 ZNF121P58317 390 aaPredicted RBP14.02□□□□□ -0.17
USB1-211ENST00000565662 ATP6AP1Q15904 470 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 SLC16A9Q7RTY1 509 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 NAA40Q86UY6 237 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 CPOQ8IVL8 374 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 C10orf67Q8IYJ2 551 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 DEFB108BQ8NET1 73 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 FAM216AQ8WUB2 273 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 ZNRF4Q8WWF5 429 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 RAB40AQ8WXH6 277 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 C12orf43Q96C57 262 aaKnown RBP14.02□□□□□ -0.17
USB1-211ENST00000565662 MICU1Q9BPX6 476 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 CADM1Q9BY67 442 aaKnown RBP14.02□□□□□ -0.17
USB1-211ENST00000565662 MROQ9BYG7 248 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 MOB1AQ9H8S9 216 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 KRT84Q9NSB2 600 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 DCAF16Q9NXF7 216 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 DOCK11Q5JSL3 2073 aa14.02□□□□□ -0.17
USB1-211ENST00000565662 IGHV2-70DA0A0C4DH43 119 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 hCG_38984A0A1B0GV85 526 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 A6NLC8 198 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 G3V2T6 193 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 GPR37O15354 613 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 ECDO95905 644 aaPredicted RBP14.01□□□□□ -0.17
USB1-211ENST00000565662 MUC1P15941 1255 aaPredicted RBP14.01□□□□□ -0.17
USB1-211ENST00000565662 MTNR1AP48039 350 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 FAM3AP98173 230 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 OR8B8Q15620 311 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 ZNF829Q3KNS6 432 aaPredicted RBP14.01□□□□□ -0.17
USB1-211ENST00000565662 C1orf146Q5VVC0 180 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 C1orf229Q6ZS94 237 aaPredicted RBP14.01□□□□□ -0.17
USB1-211ENST00000565662 KRT77Q7Z794 578 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 TMEM179BQ7Z7N9 219 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 GID4Q8IVV7 300 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 THEM6Q8WUY1 208 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 ZMYND19Q96E35 227 aaPredicted RBP14.01□□□□□ -0.17
USB1-211ENST00000565662 DUS3LQ96G46 650 aaKnown RBP14.01□□□□□ -0.17
USB1-211ENST00000565662 RTL8AQ9BWD3 113 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 GABARAPL1Q9H0R8 117 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 MED20Q9H944 212 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 H2AFY2Q9P0M6 372 aaPredicted RBP14.01□□□□□ -0.17
USB1-211ENST00000565662 OPN4Q9UHM6 478 aa14.01□□□□□ -0.17
USB1-211ENST00000565662 A0A0U1RQV5 110 aa14□□□□□ -0.17
USB1-211ENST00000565662 OOEPA6NGQ2 149 aa14□□□□□ -0.17
USB1-211ENST00000565662 SLC2A1P11166 492 aa14□□□□□ -0.17
USB1-211ENST00000565662 ZFP36P26651 326 aaKnown RBP14□□□□□ -0.17
USB1-211ENST00000565662 CFHR2P36980 270 aa14□□□□□ -0.17
USB1-211ENST00000565662 PSMB10P40306 273 aa14□□□□□ -0.17
USB1-211ENST00000565662 ACTG1P63261 375 aa14□□□□□ -0.17
USB1-211ENST00000565662 PAX8Q06710 450 aa14□□□□□ -0.17
USB1-211ENST00000565662 POU4F2Q12837 409 aa14□□□□□ -0.17
USB1-211ENST00000565662 ZBTB37Q5TC79 503 aa14□□□□□ -0.17
USB1-211ENST00000565662 FAM57BQ71RH2 274 aa14□□□□□ -0.17
USB1-211ENST00000565662 PRSS45Q7RTY3 260 aa14□□□□□ -0.17
USB1-211ENST00000565662 PNLDC1Q8NA58 520 aaKnown RBP14□□□□□ -0.17
USB1-211ENST00000565662 UTP4Q969X6 686 aaKnown RBP14□□□□□ -0.17
USB1-211ENST00000565662 CNN2Q99439 309 aaKnown RBP14□□□□□ -0.17
USB1-211ENST00000565662 PAPOLGQ9BWT3 736 aaKnown RBP14□□□□□ -0.17
USB1-211ENST00000565662 KAAG1Q9UBP8 84 aa14□□□□□ -0.17
USB1-211ENST00000565662 AP4S1Q9Y587 144 aa14□□□□□ -0.17
USB1-211ENST00000565662 DNHD1Q96M86 4753 aa14□□□□□ -0.17
USB1-211ENST00000565662 hCG_1807616A0A1W2PRN6 198 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 MTRF1O75570 445 aaKnown RBP13.99□□□□□ -0.17
USB1-211ENST00000565662 PSKH1P11801 424 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 ALOX5APP20292 161 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 SLC2A5P22732 501 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 GSK3AP49840 483 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 APOFQ13790 326 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 MICBQ29980 383 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 PRAMEF6Q5VXH4 476 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 NXNL2Q5VZ03 156 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 TEX36Q5VZQ5 186 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 WDR25Q64LD2 544 aaPredicted RBP13.99□□□□□ -0.17
USB1-211ENST00000565662 C9orf139Q6ZV77 190 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 SPATC1Q76KD6 591 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 SLC36A1Q7Z2H8 476 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 GALNT4Q8N4A0 578 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 OR10Z1Q8NGY1 313 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 FAM81AQ8TBF8 368 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 UPRTQ96BW1 309 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 HIST1H2AAQ96QV6 131 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 DNTTIP1Q9H147 329 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 UFSP2Q9NUQ7 469 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 TVP23BQ9NYZ1 205 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 DNAJC27Q9NZQ0 273 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 N6AMT1Q9Y5N5 214 aa13.99□□□□□ -0.17
USB1-211ENST00000565662 KIR2DS1A0A191URI9 304 aa13.98□□□□□ -0.17
USB1-211ENST00000565662 TRAPPC2LH3BP13 241 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms