RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 NEU1Q99519 415 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 SLC5A7Q9GZV3 580 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 DUSP15Q9H1R2 295 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 MRM2Q9UI43 246 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 TNRC18O15417 2968 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 ELOA3CA0A087WX78 387 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 A0A1B0GX78 115 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 C9JQL5 133 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 K7ESF4 209 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 TSPAN2O60636 221 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 LRP3O75074 770 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 ITGA5P08648 1049 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 ASAH2BP0C7U1 165 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 OR8G3PP0DMU2 310 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 PAX1P15863 534 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 TBPP20226 339 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 IL12BP29460 328 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 CDKN2AP42771 156 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 SLC6A8P48029 635 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 SULT1A1P50225 295 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 SLC25A1P53007 311 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 OR2B8PP59922 312 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 ZNF117Q03924 483 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 LEG1Q6P5S2 330 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 WDR74Q6RFH5 385 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 DMRTC2Q8IXT2 367 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 ZNF676Q8N7Q3 588 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 ZNF563Q8TA94 476 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 DAZLQ92904 295 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 ZNF501Q96CX3 271 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 VN1R1Q9GZP7 353 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 WWTR1Q9GZV5 400 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 TAF9BQ9HBM6 251 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 STARD10Q9Y365 291 aa12.43□□□□□ -0.42
RABGGTA-220ENST00000560998 RP1P56715 2156 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 CDC14CA4D256 554 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 C4orf47A7E2U8 309 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 PRR32B1ATL7 298 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 RPL36A-HNRNPH2H7BZ11 118 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 M0R036 132 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 RPP14O95059 124 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 NDUFB7P17568 137 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 CEACAM6P40199 344 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 AKR1C3P42330 323 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 SLC26A5P58743 744 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 DMWDQ09019 674 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 FOXO1Q12778 655 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 SHBQ15464 509 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 ALG10Q5BKT4 473 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 LINC01590Q5TEZ4 76 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 HLA-DQA1Q5Y7H0 255 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 HEPN1Q6WQI6 88 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 KCTD9Q7L273 389 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 MAMDC2Q7Z304 686 aaPredicted RBP12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 FAM24BQ8N5W8 94 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 EXD3Q8N9H8 876 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 SECTM1Q8WVN6 248 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 PTX4Q96A99 478 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 ISOC2Q96AB3 205 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 KTI12Q96EK9 354 aaPredicted RBP12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 MARS2Q96GW9 593 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 MEGF10Q96KG7 1140 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 RHOVQ96L33 236 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 ZNF587Q96SQ5 575 aaPredicted RBP12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 LPAR4Q99677 370 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 ALG12Q9BV10 488 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 RAB18Q9NP72 206 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 FGF21Q9NSA1 209 aa12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 ARID1BQ8NFD5 2236 aaPredicted RBP12.42□□□□□ -0.42
RABGGTA-220ENST00000560998 A0A1W2PQD3 144 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 STK17BO94768 372 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 TXNDC12O95881 172 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 CXCL12P48061 93 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 UCP2P55851 309 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 CTXN1P60606 82 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 EGR3Q06889 387 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 ZNF627Q7L945 461 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 NUP54Q7Z3B4 507 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 MARCH3Q86UD3 253 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 OR1N1Q8NGS0 311 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 ADAD1Q96M93 576 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 YPEL4Q96NS1 127 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 NUDT22Q9BRQ3 303 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 COPS7AQ9UBW8 275 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 FARSAQ9Y285 508 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 LAMA1P25391 3075 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 C13orf42A0A1B0GVH6 325 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 BTBD17A6NE02 478 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 IFITM10A6NMD0 228 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 FAM171A2A8MVW0 826 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 ALG1L2C9J202 215 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 ADAM10O14672 748 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 EFSO43281 561 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 HCRTR2O43614 444 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 CST4P01036 141 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 CSTBP04080 98 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 GAPDHP04406 335 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 ZNF28P17035 718 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 VAMP1P23763 118 aa12.41□□□□□ -0.42
RABGGTA-220ENST00000560998 PLCXD2Q0VAA5 305 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms