RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 OPA3Q9H6K4 179 aa12□□□□□ -0.49
TPM1-215ENST00000558868 PIGLQ9Y2B2 252 aa12□□□□□ -0.49
TPM1-215ENST00000558868 DMXL2Q8TDJ6 3036 aa12□□□□□ -0.49
TPM1-215ENST00000558868 ARHGAP21Q5T5U3 1957 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 A0A1B0GVG6 124 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 GSTZ1O43708 216 aaPredicted RBP11.99□□□□□ -0.49
TPM1-215ENST00000558868 BPNT1O95861 308 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 IL2RAP01589 272 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 HCKP08631 526 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 TMIGD3P0DMS9 266 aaPredicted RBP11.99□□□□□ -0.49
TPM1-215ENST00000558868 RAB6AP20340 208 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 IGHV1-2P23083 117 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 HOXC12P31275 282 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 TIMP3P35625 211 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 ZNF93P35789 620 aaPredicted RBP11.99□□□□□ -0.49
TPM1-215ENST00000558868 FAM189A2Q15884 450 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 TMEM69Q5SWH9 247 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 ZBTB37Q5TC79 503 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 MZT2BQ6NZ67 158 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 COLCA1Q6ZS62 124 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 LYPD6Q86Y78 171 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 SPSB4Q96A44 273 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 APOBEC3DQ96AK3 386 aaPredicted RBP11.99□□□□□ -0.49
TPM1-215ENST00000558868 TECTBQ96PL2 329 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 CHST5Q9GZS9 411 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 TBCCD1Q9NVR7 557 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 B3GNT2Q9NY97 397 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 LUZP4Q9P127 313 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 CGGBP1Q9UFW8 167 aaPredicted RBP11.99□□□□□ -0.49
TPM1-215ENST00000558868 TEP1Q99973 2627 aaKnown RBP11.99□□□□□ -0.49
TPM1-215ENST00000558868 AKAP13Q12802 2813 aa11.99□□□□□ -0.49
TPM1-215ENST00000558868 A0A0A6YYH2 397 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 C5orf49A4QMS7 147 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 A6NJ64 397 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 E9PLN8 166 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 J3QW42 95 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 PRRG2O14669 202 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 SCGNO76038 276 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 UBBP0CG47 229 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 PRF1P14222 555 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 COX5AP20674 150 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 PRKACBP22694 351 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 HGFACQ04756 655 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 MRPL49Q13405 166 aaKnown RBP11.98□□□□□ -0.49
TPM1-215ENST00000558868 P2RY6Q15077 328 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 CNN3Q15417 329 aaKnown RBP11.98□□□□□ -0.49
TPM1-215ENST00000558868 GABRA6Q16445 453 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 HIKESHIQ53FT3 197 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 BEND4Q6ZU67 534 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 CD163Q86VB7 1156 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 OR5AS1Q8N127 324 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 C17orf78Q8N4C9 275 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 PIP4P2Q8N4L2 257 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 PNLDC1Q8NA58 520 aaKnown RBP11.98□□□□□ -0.49
TPM1-215ENST00000558868 KDF1Q8NAX2 398 aaPredicted RBP11.98□□□□□ -0.49
TPM1-215ENST00000558868 OR52N4Q8NGI2 321 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 OR5L1Q8NGL2 311 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 POM121L2Q96KW2 1035 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 THAP7Q9BT49 309 aaPredicted RBP11.98□□□□□ -0.49
TPM1-215ENST00000558868 SLC22A4Q9H015 551 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 TP63Q9H3D4 680 aaPredicted RBP11.98□□□□□ -0.49
TPM1-215ENST00000558868 OBP2BQ9NPH6 170 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 ZNF71Q9NQZ8 489 aaPredicted RBP11.98□□□□□ -0.49
TPM1-215ENST00000558868 RAB22AQ9UL26 194 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 MRPS7Q9Y2R9 242 aaKnown RBP11.98□□□□□ -0.49
TPM1-215ENST00000558868 APC2O95996 2303 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 MED12LQ86YW9 2145 aa11.98□□□□□ -0.49
TPM1-215ENST00000558868 URB1O60287 2271 aaKnown RBP11.97□□□□□ -0.49
TPM1-215ENST00000558868 LOC100509620A0A075B734 347 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 TMEM272A0A1B0GTI8 110 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 C5orf63A6NC05 138 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 METTL21EPA6NDL7 271 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 A6NIN4 97 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 ZNHIT1O43257 154 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 XRCC3O43542 346 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 FAHP16930 419 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 GSK3AP49840 483 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 RBPJQ06330 500 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 MADCAM1Q13477 382 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 TAB1Q15750 504 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 TBC1D28Q2M2D7 210 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 CLVS2Q5SYC1 327 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 ZNF57Q68EA5 555 aaPredicted RBP11.97□□□□□ -0.49
TPM1-215ENST00000558868 VWA1Q6PCB0 445 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 MDP1Q86V88 176 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 CISD2Q8N5K1 135 aaKnown RBP11.97□□□□□ -0.49
TPM1-215ENST00000558868 SPSB1Q96BD6 273 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 ABHD1Q96SE0 405 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 GPER1Q99527 375 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 SOX7Q9BT81 388 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 SFXN3Q9BWM7 321 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 CNTD2Q9H8S5 307 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 MOV10Q9HCE1 1003 aaKnown RBP11.97□□□□□ -0.49
TPM1-215ENST00000558868 FAIMQ9NVQ4 179 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 GHRLQ9UBU3 117 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 FBLN5Q9UBX5 448 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 TBC1D24Q9ULP9 559 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 LAMA5O15230 3695 aa11.97□□□□□ -0.49
TPM1-215ENST00000558868 hCG_38984A0A1B0GV85 526 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 GABARAPH6UMI1 98 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms