RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 LOC101059948A0A1B0GTJ6 334 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 CA11O75493 328 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 PRKXP51817 358 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 ZNF133P52736 654 aaPredicted RBP20.55■□□□□ 0.88
FOXA1-202ENST00000545425 PPP1R1AQ13522 171 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 MOB3CQ70IA8 216 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 ZNF101Q8IZC7 436 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 OR4S1Q8NGB4 309 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 LHFPL5Q8TAF8 219 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 FBXW5Q969U6 566 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 SPSB2Q99619 263 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 GAL3ST1Q99999 423 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 DEFB126Q9BYW3 111 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 NMES1Q9C002 83 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 CST11Q9H112 138 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 ZMAT3Q9HA38 289 aaKnown RBP20.55■□□□□ 0.88
FOXA1-202ENST00000545425 EFSO43281 561 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 VAMP5O95183 116 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 WDPCPO95876 746 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 HIST1H1DP16402 221 aaKnown RBP20.55■□□□□ 0.88
FOXA1-202ENST00000545425 EPHA8P29322 1005 aaPredicted RBP20.55■□□□□ 0.88
FOXA1-202ENST00000545425 HRH1P35367 487 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 STARP49675 285 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 FAM69BQ5VUD6 431 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 CD163Q86VB7 1156 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 TMEM17Q86X19 198 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 SLC38A6Q8IZM9 456 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 OR5AS1Q8N127 324 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 PNLDC1Q8NA58 520 aaKnown RBP20.55■□□□□ 0.88
FOXA1-202ENST00000545425 SLC38A9Q8NBW4 561 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 INO80EQ8NBZ0 244 aaPredicted RBP20.55■□□□□ 0.88
FOXA1-202ENST00000545425 TMEM185AQ8NFB2 350 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 OR4K15Q8NH41 348 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 TERB2Q8NHR7 220 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 RAB3CQ96E17 227 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 LINC00052Q96N35 136 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 SELENOIQ9C0D9 397 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 SEC61A2Q9H9S3 476 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 FBXL2Q9UKC9 423 aa20.55■□□□□ 0.88
FOXA1-202ENST00000545425 CACNA1CQ13936 2221 aa20.54■□□□□ 0.88
FOXA1-202ENST00000545425 DBX1A6NMT0 343 aa20.54■□□□□ 0.88
FOXA1-202ENST00000545425 SPDEFO95238 335 aa20.54■□□□□ 0.88
FOXA1-202ENST00000545425 PRF1P14222 555 aa20.54■□□□□ 0.88
FOXA1-202ENST00000545425 GUCA1AP43080 201 aaPredicted RBP20.54■□□□□ 0.88
FOXA1-202ENST00000545425 ECH1Q13011 328 aa20.54■□□□□ 0.88
FOXA1-202ENST00000545425 NKPD1Q17RQ9 610 aa20.54■□□□□ 0.88
FOXA1-202ENST00000545425 GLIPR1L1Q6UWM5 242 aa20.54■□□□□ 0.88
FOXA1-202ENST00000545425 Q6ZSR3 168 aa20.54■□□□□ 0.88
FOXA1-202ENST00000545425 ABHD12BQ7Z5M8 362 aaPredicted RBP20.54■□□□□ 0.88
FOXA1-202ENST00000545425 PPP1R3BQ86XI6 285 aa20.54■□□□□ 0.88
FOXA1-202ENST00000545425 OR10G3Q8NGC4 313 aa20.54■□□□□ 0.88
FOXA1-202ENST00000545425 OR8B12Q8NGG6 310 aa20.54■□□□□ 0.88
FOXA1-202ENST00000545425 NAT6Q93015 286 aa20.54■□□□□ 0.88
FOXA1-202ENST00000545425 VRK1Q99986 396 aaPredicted RBP20.54■□□□□ 0.88
FOXA1-202ENST00000545425 TMEM59Q9BXS4 323 aa20.54■□□□□ 0.88
FOXA1-202ENST00000545425 TRBV6-7A0A0A0MS04 114 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 CDC14BO60729 498 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 EIF1BO60739 113 aaKnown RBP20.53■□□□□ 0.88
FOXA1-202ENST00000545425 OR2J2O76002 312 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 RLN2P04090 185 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 THBS4P35443 961 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 DLSTP36957 453 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 ZNF121P58317 390 aaPredicted RBP20.53■□□□□ 0.88
FOXA1-202ENST00000545425 TMEM128Q5BJH2 165 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 UQCC3Q6UW78 93 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 FOXL2NBQ6ZUU3 175 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 SSC4DQ8WTU2 575 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 PPP1R1CQ8WVI7 109 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 NUDCD2Q8WVJ2 157 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 INTS12Q96CB8 462 aaKnown RBP20.53■□□□□ 0.88
FOXA1-202ENST00000545425 OR5B2Q96R09 309 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 LDAHQ9H6V9 325 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 PNRC2Q9NPJ4 139 aaKnown RBP20.53■□□□□ 0.88
FOXA1-202ENST00000545425 KCNK7Q9Y2U2 307 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 LAMA1P25391 3075 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 LOC102723996A0A087X1L8 192 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 A0A0U1RQV5 110 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 MED19A0JLT2 244 aaPredicted RBP20.53■□□□□ 0.88
FOXA1-202ENST00000545425 NUDT19A8MXV4 375 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 YKT6O15498 198 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 SSX5O60225 188 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 GP1BAP07359 652 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 C10orf128Q5T292 105 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 GTPBP8Q8N3Z3 284 aaPredicted RBP20.53■□□□□ 0.88
FOXA1-202ENST00000545425 MRGPRFQ96AM1 343 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 RASL10BQ96S79 203 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 NKX3-1Q99801 234 aaPredicted RBP20.53■□□□□ 0.88
FOXA1-202ENST00000545425 TMEM185BQ9H7F4 350 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 GPR84Q9NQS5 396 aa20.53■□□□□ 0.88
FOXA1-202ENST00000545425 MYEF2Q9P2K5 600 aaKnown RBP20.53■□□□□ 0.88
FOXA1-202ENST00000545425 CER1O95813 267 aa20.52■□□□□ 0.88
FOXA1-202ENST00000545425 IGLV3-1P01715 115 aa20.52■□□□□ 0.88
FOXA1-202ENST00000545425 GNB3P16520 340 aa20.52■□□□□ 0.88
FOXA1-202ENST00000545425 ECI1P42126 302 aa20.52■□□□□ 0.88
FOXA1-202ENST00000545425 PI4KAP42356 2102 aa20.52■□□□□ 0.88
FOXA1-202ENST00000545425 TAS2R46P59540 309 aa20.52■□□□□ 0.88
FOXA1-202ENST00000545425 NAAAQ02083 359 aa20.52■□□□□ 0.88
FOXA1-202ENST00000545425 TUSC1Q2TAM9 212 aa20.52■□□□□ 0.88
FOXA1-202ENST00000545425 MRPL14Q6P1L8 145 aaKnown RBP20.52■□□□□ 0.88
FOXA1-202ENST00000545425 OPN5Q6U736 354 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms