RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 A0A0B4J2A0 478 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 IGHV3-20A0A0C4DH32 117 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 LOC102725191A0A1B0GVB3 256 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 KANTRA0A1W2PQU2 76 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 VSTM2BA6NLU5 285 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 MPTX1A8MV57 137 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 DNASE2O00115 360 aaPredicted RBP4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 CCSO14618 274 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 TOX3O15405 576 aaPredicted RBP4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 FGF16O43320 207 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 IGLV3-1P01715 115 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 LYL1P12980 280 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 ZNF17P17021 662 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 RAB3AP20336 220 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 CNR1P21554 472 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 HRH1P35367 487 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 LUMP51884 338 aaPredicted RBP4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 BIDP55957 195 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 TAS2R31P59538 309 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 IL13RA1P78552 427 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 SIGLEC14Q08ET2 396 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 MYBPHQ13203 477 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 TAF13Q15543 124 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 INPP5JQ15735 1006 aaPredicted RBP4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 HIST3H3Q16695 136 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 NKPD1Q17RQ9 610 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 PNLIPRP3Q17RR3 467 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 PLPPR5Q32ZL2 321 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 PAN3Q58A45 887 aaKnown RBP4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 OR52W1Q6IF63 320 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 FAM122CQ6P4D5 195 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 SLC25A47Q6Q0C1 308 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 KLHL24Q6TFL4 600 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 CFAP77Q6ZQR2 320 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 RABEPKQ7Z6M1 372 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 CD163Q86VB7 1156 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 SLC25A45Q8N413 288 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 CHST4Q8NCG5 386 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 ADAD2Q8NCV1 583 aaKnown RBP4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 NOXO1Q8NFA2 376 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 TMEM185AQ8NFB2 350 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 OR10H5Q8NGA6 315 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 OR10K1Q8NGX5 313 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 STOML3Q8TAV4 291 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 NUDCD2Q8WVJ2 157 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 NANOS1Q8WY41 292 aaKnown RBP4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 FBXW5Q969U6 566 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 MESP1Q9BRJ9 268 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 NMES1Q9C002 83 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 GAREM1Q9H706 876 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 TMEM185BQ9H7F4 350 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 PNRC2Q9NPJ4 139 aaKnown RBP4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 COMMD9Q9P000 198 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 SHPKQ9UHJ6 478 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 TECTAO75443 2155 aa4.59□□□□□ -1.67
ATPAF1-212ENST00000542495 WDFY4Q6ZS81 3184 aa4.59□□□□□ -1.68
ATPAF1-212ENST00000542495 CACNA1CQ13936 2221 aa4.59□□□□□ -1.68
ATPAF1-212ENST00000542495 TEX13DA0A0J9YY54 714 aaPredicted RBP4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 FOXI3A8MTJ6 420 aaPredicted RBP4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 ZNF878C9JN71 531 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 TEX46H3BTG2 121 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 MFNGO00587 321 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 TOR1AO14656 332 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 TSPAN4O14817 238 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 TMPRSS2O15393 492 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 TRAF3IP2O43734 574 aaPredicted RBP4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 CSN2P05814 226 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 CRHP06850 196 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 DCNP07585 359 aaKnown RBP4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 LIPCP11150 499 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 HIST1H1DP16402 221 aaKnown RBP4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 GNB3P16520 340 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 CTSSP25774 331 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 AVPR2P30518 371 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 ZNF93P35789 620 aaPredicted RBP4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 DLSTP36957 453 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 ALDH3B1P43353 468 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 CX3CR1P49238 355 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 PRKXP51817 358 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 TMEM50BP56557 158 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 FOXL2P58012 376 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 PPIAP62937 165 aaKnown RBP4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 NAAAQ02083 359 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 MFAP5Q13361 173 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 SNTB1Q13884 538 aaKnown RBP4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 ACTBL2Q562R1 376 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 PLAC9Q5JTB6 97 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 FAM74A1Q5RGS3 127 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 NSUN5P2Q63ZY6 315 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 ZNF385CQ66K41 422 aaPredicted RBP4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 CRIP3Q6Q6R5 217 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 ATRAIDQ6UW56 229 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 UQCC3Q6UW78 93 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 SHISA6Q6ZSJ9 500 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 Q6ZSR3 168 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 PGAP1Q75T13 922 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 RNF144BQ7Z419 303 aa4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 PEG10Q86TG7 708 aaKnown RBP4.58□□□□□ -1.68
ATPAF1-212ENST00000542495 RTN4RL2Q86UN3 420 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms