RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 GIFP27352 417 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 MAGEB1P43366 347 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 TNFAIP6P98066 277 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-205ENST00000536255 FAM3AP98173 230 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 MRPL28Q13084 256 aaKnown RBP11.5□□□□□ -0.57
RPAIN-205ENST00000536255 TSTQ16762 297 aaKnown RBP11.5□□□□□ -0.57
RPAIN-205ENST00000536255 LHFPL3Q86UP9 236 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 COMMD2Q86X83 199 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 KLBQ86Z14 1044 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 SYS1Q8N2H4 156 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 ZNF540Q8NDQ6 660 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 OR56B2PQ8NGI1 322 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 HAVCR2Q8TDQ0 301 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 GTF3AQ92664 365 aaKnown RBP11.5□□□□□ -0.57
RPAIN-205ENST00000536255 RDH5Q92781 318 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 ELMOD3Q96FG2 381 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 SIGLEC11Q96RL6 698 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 ALG8Q9BVK2 526 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 JAM3Q9BX67 310 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 ANKRD60Q9BZ19 345 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 BPESC1Q9GZL8 116 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 RASSF4Q9H2L5 321 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 FGF20Q9NP95 211 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-205ENST00000536255 CHCHD3Q9NX63 227 aaKnown RBP11.5□□□□□ -0.57
RPAIN-205ENST00000536255 ERVK13-1Q9NX77 482 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 CNOT2Q9NZN8 540 aaKnown RBP11.5□□□□□ -0.57
RPAIN-205ENST00000536255 ZNF319Q9P2F9 582 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 IL19Q9UHD0 177 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 OR52A1Q9UKL2 312 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 RAB26Q9ULW5 256 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 MYRFQ9Y2G1 1151 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 NIPBLQ6KC79 2804 aaeCLIP11.5□□□□□ -0.57
RPAIN-205ENST00000536255 CSPG4Q6UVK1 2322 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 TLN2Q9Y4G6 2542 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 CR1P17927 2039 aa11.5□□□□□ -0.57
RPAIN-205ENST00000536255 C5orf63A6NC05 138 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 LYNX1G3V0Z9 82 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 SRSF10O75494 262 aaKnown RBP11.49□□□□□ -0.57
RPAIN-205ENST00000536255 MTRF1O75570 445 aaKnown RBP11.49□□□□□ -0.57
RPAIN-205ENST00000536255 NCR1O76036 304 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 HPXP02790 462 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 LYNX1P0DP58 116 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 PIPP12273 146 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-205ENST00000536255 ACHEP22303 614 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 ANOS1P23352 680 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 MYF6P23409 242 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 SRP9P49458 86 aaKnown RBP11.49□□□□□ -0.57
RPAIN-205ENST00000536255 GSK3AP49840 483 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 MFGE8Q08431 387 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-205ENST00000536255 MZT1Q08AG7 82 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 OR8B8Q15620 311 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 TMEM249Q2WGJ8 235 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 TP53I3Q53FA7 332 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 Q6ZR03 302 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 ELMOD2Q8IZ81 293 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 SPERTQ8NA61 448 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 RORBQ92753 470 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 TMEM80Q96HE8 168 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 C4orf36Q96KX1 117 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 ZNF184Q99676 751 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-205ENST00000536255 Q9H521 79 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 G6PC2Q9NQR9 355 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 PLCXD1Q9NUJ7 323 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 ACOXLQ9NUZ1 547 aa11.49□□□□□ -0.57
RPAIN-205ENST00000536255 DIMT1Q9UNQ2 313 aaKnown RBP11.49□□□□□ -0.57
RPAIN-205ENST00000536255 EXOSC1Q9Y3B2 195 aaKnown RBP11.49□□□□□ -0.57
RPAIN-205ENST00000536255 IGHV1-69-2A0A0G2JMI3 117 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.48□□□□□ -0.57
RPAIN-205ENST00000536255 A0A1B0GWJ7 208 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 J3QLW9 94 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 CD5LO43866 347 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 GMDSO60547 372 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 PNPP00491 289 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 HTR1AP08908 422 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 ZNF19P17023 458 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 HOXB4P17483 251 aaPredicted RBP11.48□□□□□ -0.57
RPAIN-205ENST00000536255 MAP2K3P46734 347 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 PRSS12P56730 875 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 OR12D2P58182 307 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 RIN1Q13671 783 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 OR8G1Q15617 311 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 HFEQ30201 348 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 TMPRSS11AQ6ZMR5 421 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 CATSPERDQ86XM0 798 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 BPIFB6Q8NFQ5 453 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 OR10AD1Q8NGE0 317 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 OR51E1Q8TCB6 317 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 GGHQ92820 318 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 CHODLQ9H9P2 273 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 ABCB9Q9NP78 766 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 GPR84Q9NQS5 396 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 SCN3BQ9NY72 215 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 HIVEP2P31629 2446 aa11.48□□□□□ -0.57
RPAIN-205ENST00000536255 IGHV4-61A0A0C4DH41 118 aa11.47□□□□□ -0.57
RPAIN-205ENST00000536255 INAFM1C9JVW0 142 aa11.47□□□□□ -0.57
RPAIN-205ENST00000536255 XPNPEP2O43895 674 aa11.47□□□□□ -0.57
RPAIN-205ENST00000536255 LILRA1O75019 489 aa11.47□□□□□ -0.57
RPAIN-205ENST00000536255 DHRS3O75911 302 aa11.47□□□□□ -0.57
RPAIN-205ENST00000536255 TTRP02766 147 aa11.47□□□□□ -0.57
RPAIN-205ENST00000536255 RPSAP08865 295 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms