RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 RAB6AP20340 208 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 AGTR1P30556 359 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 HOXC12P31275 282 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 POU3F4P49335 361 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 PSG4Q00888 419 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 FAPQ12884 760 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 MALLQ13021 153 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 MRPL49Q13405 166 aaKnown RBP8.96□□□□□ -0.98
HDAC3-214ENST00000495485 GLYATL3Q5SZD4 288 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 FAM214BQ7L5A3 538 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 ADGRE4PQ86SQ3 457 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 SNX29P2Q8IUI4 249 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 SKA3Q8IX90 412 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 CMTM4Q8IZR5 234 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 TOMM5Q8N4H5 51 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 PLPP7Q8NBV4 271 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 OR4M2Q8NGB6 313 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 OR1J2Q8NGS2 313 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 OR5H6Q8NGV6 325 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 ORAI1Q96D31 301 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 FAM71F1Q96KD3 344 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-214ENST00000495485 TRIB1Q96RU8 372 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 S100A13Q99584 98 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 GFI1Q99684 422 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 OCEL1Q9H607 264 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 OPA3Q9H6K4 179 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 METTL17Q9H7H0 456 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-214ENST00000495485 TAS2R8Q9NYW2 309 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 COPZ2Q9P299 210 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 RALYQ9UKM9 306 aaKnown RBP8.96□□□□□ -0.98
HDAC3-214ENST00000495485 RAB22AQ9UL26 194 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 CLEC4AQ9UMR7 237 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 MRPS7Q9Y2R9 242 aaKnown RBP8.96□□□□□ -0.98
HDAC3-214ENST00000495485 V9GYS6 101 aa8.96□□□□□ -0.98
HDAC3-214ENST00000495485 A0A1B0GTI1 187 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 FAM240BA0A1B0GVZ2 78 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 NAP1L6A6NFF2 107 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 GABARAPH6UMI1 98 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 LYRM1O43325 122 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 XRCC3O43542 346 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 BPNT1O95861 308 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 TPOP07202 933 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 SLC2A1P11166 492 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 CD79AP11912 226 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 PRKACBP22694 351 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 CRYGSP22914 178 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 NTF4P34130 210 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 APLNRP35414 380 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 FAUP35544 74 aaKnown RBP8.95□□□□□ -0.98
HDAC3-214ENST00000495485 ZNF93P35789 620 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-214ENST00000495485 BCAP31P51572 246 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 SSBP1Q04837 148 aaKnown RBP8.95□□□□□ -0.98
HDAC3-214ENST00000495485 SPOCK1Q08629 439 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 RIPPLY1Q0D2K3 151 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 DYRK1AQ13627 763 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 P2RY14Q15391 338 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 CNN3Q15417 329 aaKnown RBP8.95□□□□□ -0.98
HDAC3-214ENST00000495485 IGFBP7Q16270 282 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 GFOD2Q3B7J2 385 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 C2orf76Q3KRA6 126 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 ZBTB37Q5TC79 503 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 FAM166AQ6J272 317 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 ZNF774Q6NX45 483 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 PLET1Q6UQ28 207 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 UNQ6126/PRO20091Q6UXV3 157 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 Q6ZSR3 168 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 UTS2BQ765I0 119 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 LINGO2Q7L985 606 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 FTMTQ8N4E7 242 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 SEMA6DQ8NFY4 1073 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 OR51D1Q8NGF3 324 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 OR5L1Q8NGL2 311 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 OR6K3Q8NGY3 331 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 HTRA1Q92743 480 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 ZNF837Q96EG3 531 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-214ENST00000495485 ZC3HAV1LQ96H79 300 aaKnown RBP8.95□□□□□ -0.98
HDAC3-214ENST00000495485 GPER1Q99527 375 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 WNT5BQ9H1J7 359 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 MOV10Q9HCE1 1003 aaKnown RBP8.95□□□□□ -0.98
HDAC3-214ENST00000495485 PCDHB16Q9NRJ7 776 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 CLCF1Q9UBD9 225 aa8.95□□□□□ -0.98
HDAC3-214ENST00000495485 TRGV8A0A0C4DH27 118 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 FUOMA2VDF0 154 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 CLEC18AA5D8T8 446 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 J3QW42 95 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 SULT1C2O00338 296 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 TGM6O95932 706 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 IGLV3-1P01715 115 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 ITGA5P08648 1049 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 MMP7P09237 267 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-214ENST00000495485 GNLYP22749 145 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 TIMP3P35625 211 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 GSK3AP49840 483 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 CLDN12P56749 244 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 UBE2NP61088 152 aaKnown RBP8.94□□□□□ -0.98
HDAC3-214ENST00000495485 ARL6IP1Q15041 203 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 C3AR1Q16581 482 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 PABPC1L2AQ5JQF8 200 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 C1QTNF12Q5T7M4 302 aa8.94□□□□□ -0.98
HDAC3-214ENST00000495485 NSUN5P2Q63ZY6 315 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms