RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 OR5V1Q9UGF6 321 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 MGAM2Q2M2H8 2515 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 IGHV3-64DA0A0J9YX35 117 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 RIIAD1A6NNX1 92 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 ZNF878C9JN71 531 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 LGALS8O00214 317 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 PHYHO14832 338 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 XRCC2O43543 280 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 NDUFA2O43678 99 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 FCN3O75636 299 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 RGS9O75916 674 aaPredicted RBP8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 GLCEO94923 617 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 APOC1P02654 83 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 RPS2P15880 293 aaKnown RBP8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 ZNF3P17036 446 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 PRTN3P24158 256 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 GSTT1P30711 240 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 SLC15A1P46059 708 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 PITPNBP48739 271 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 PRKXP51817 358 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 GNB2P62879 340 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 GRB2P62993 217 aaKnown RBP8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 FAM3AP98173 230 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 RIPK1Q13546 671 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 OR8G1Q15617 311 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 KLHL12Q53G59 568 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 PRAMEF6Q5VXH4 476 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 C12orf54Q6X4T0 127 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 SLC16A9Q7RTY1 509 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 DPY19L4Q7Z388 723 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 SIGLECL1Q8N7X8 197 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 OR56B2PQ8NGI1 322 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 OR52H1Q8NGJ2 320 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 C22orf15Q8WYQ4 148 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 GCDHQ92947 438 aaPredicted RBP8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 INTS14Q96SY0 518 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 AMELYQ99218 206 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 COPS4Q9BT78 406 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 MRI1Q9BV20 369 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 DCLRE1BQ9H816 532 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 CENPMQ9NSP4 180 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 AP4S1Q9Y587 144 aa8.09□□□□□ -1.11
TMEM39A-210ENST00000490099 hCG_38984A0A1B0GV85 526 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 GGT3PA6NGU5 568 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 FAM183AA6NL82 134 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 C22orf46C9J442 243 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 CST1P01037 141 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 HMGN1P05114 100 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 LIPFP07098 398 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 IGHV4-38-2P0DP08 117 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 HKR1P10072 659 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 SLC2A1P11166 492 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 OSMP13725 252 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 IRF2P14316 349 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 SLC2A5P22732 501 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 NPY4RP50391 375 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 BPIFB3P59826 476 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 HOXA4Q00056 320 aaPredicted RBP8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 GINS1Q14691 196 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 OR8B8Q15620 311 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 ARMCX4Q5H9R4 360 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 FAM76BQ5HYJ3 339 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 TEX36Q5VZQ5 186 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 BTNL3Q6UXE8 466 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 SHFQ7M4L6 423 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 NLRC3Q7RTR2 1065 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 WDR86Q86TI4 376 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 GCSAMQ8N6F7 178 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 IQCF1Q8N6M8 205 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 OR8B3Q8NGG8 313 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 OR6K6Q8NGW6 343 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 OTOSQ8NHW6 89 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 TEX47Q8TBZ9 253 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 PYDC1Q8WXC3 89 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 ITFG2Q969R8 447 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 NRBF2Q96F24 287 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 OR8B2Q96RD0 313 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 NUDT16L1Q9BRJ7 211 aaKnown RBP8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 ADAT1Q9BUB4 502 aaKnown RBP8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 TLNRD1Q9H1K6 362 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 RASSF4Q9H2L5 321 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 RGCCQ9H4X1 137 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 SP140LQ9H930 580 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 MED20Q9H944 212 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 ZMAT3Q9HA38 289 aaKnown RBP8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 RNPEPL1Q9HAU8 725 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 S100A14Q9HCY8 104 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 UFSP2Q9NUQ7 469 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 KAAG1Q9UBP8 84 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 CTSZQ9UBR2 303 aa8.08□□□□□ -1.12
TMEM39A-210ENST00000490099 TRAV38-1A0A0B4J264 116 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 PRODHO43272 600 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 RNASE1P07998 156 aaKnown RBP8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 MMP9P14780 707 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 ALOX5APP20292 161 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 CFL1P23528 166 aaKnown RBP8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 FASP25445 335 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 CX3CR1P49238 355 aa8.07□□□□□ -1.12
TMEM39A-210ENST00000490099 GSK3AP49840 483 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms