RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 MAGEB1P43366 347 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 EMX1Q04741 257 aaPredicted RBP11.3□□□□□ -0.6
HDAC1-208ENST00000482310 CDK5R1Q15078 307 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 SPHARQ15513 63 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 EFNB3Q15768 340 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 C11orf71Q6IPW1 123 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 RPL22L1Q6P5R6 122 aaKnown RBP11.3□□□□□ -0.6
HDAC1-208ENST00000482310 C1orf174Q8IYL3 243 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 SPARTQ8N0X7 666 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 SVOPQ8N4V2 548 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 ZNF485Q8NCK3 441 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 OR51A4Q8NGJ6 313 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 OR13C3Q8NGS6 347 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 OR13C5Q8NGS8 318 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 OR5AK2Q8NH90 309 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 TSEN15Q8WW01 171 aaKnown RBP11.3□□□□□ -0.6
HDAC1-208ENST00000482310 SPSB4Q96A44 273 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 REPIN1Q9BWE0 567 aaKnown RBP11.3□□□□□ -0.6
HDAC1-208ENST00000482310 PAPOLGQ9BWT3 736 aaKnown RBP11.3□□□□□ -0.6
HDAC1-208ENST00000482310 PPP1R3EQ9H7J1 279 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 PLEKHA1Q9HB21 404 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 ACOT13Q9NPJ3 140 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 PIGLQ9Y2B2 252 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 A0A1B0GTI1 187 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 IQCF6A8MYZ5 107 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 H0YL77 283 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 TPD52L2O43399 206 aaKnown RBP11.29□□□□□ -0.6
HDAC1-208ENST00000482310 ZFPL1O95159 310 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 SELEP16581 610 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 KITLGP21583 273 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 CA6P23280 308 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 CFL1P23528 166 aaKnown RBP11.29□□□□□ -0.6
HDAC1-208ENST00000482310 PSMB9P28065 219 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 SOX2P48431 317 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 TGM4P49221 684 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 ZNF81P51508 661 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 MRPL28Q13084 256 aaKnown RBP11.29□□□□□ -0.6
HDAC1-208ENST00000482310 HNRNPA0Q13151 305 aaKnown RBP11.29□□□□□ -0.6
HDAC1-208ENST00000482310 TNK1Q13470 666 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 TBCEQ15813 527 aaPredicted RBP11.29□□□□□ -0.6
HDAC1-208ENST00000482310 SWI5Q1ZZU3 235 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 LIPKQ5VXJ0 399 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 RNLSQ5VYX0 342 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 FDX2Q6P4F2 183 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 DOK3Q7L591 496 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 DTX2Q86UW9 622 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 TSPAN14Q8NG11 270 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 OR2Z1Q8NG97 314 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 PIGCQ92535 297 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 PERPQ96FX8 193 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 ADAT1Q9BUB4 502 aaKnown RBP11.29□□□□□ -0.6
HDAC1-208ENST00000482310 RGCCQ9H4X1 137 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 OPA3Q9H6K4 179 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 GPR160Q9UJ42 338 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 RHBDD3Q9Y3P4 386 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 PMF1-BGLAPU3KQ54 211 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 ARID1AO14497 2285 aa11.29□□□□□ -0.6
HDAC1-208ENST00000482310 TMEM212A6NML5 194 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 ANKRD30BLA7E2S9 258 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 ZNF850A8MQ14 1090 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 NDUFS7O75251 213 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 DHRS3O75911 302 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 LY6HO94772 140 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 IGLV3-1P01715 115 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 RPSAP08865 295 aaKnown RBP11.28□□□□□ -0.6
HDAC1-208ENST00000482310 CD53P19397 219 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 ACHEP22303 614 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 TUBG1P23258 451 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 DNASE1P24855 282 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 RBMXP38159 391 aaKnown RBP11.28□□□□□ -0.6
HDAC1-208ENST00000482310 MAP2K3P46734 347 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 MMP15P51511 669 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 CCR9P51686 369 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 TAS2R43P59537 309 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 CCDC58Q4VC31 144 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 CEP78Q5JTW2 689 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 TMEM244Q5VVB8 128 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 Q6ZR03 302 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 KCTD8Q6ZWB6 473 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 ZNF367Q7RTV3 350 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 CDH24Q86UP0 819 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 SEMA6DQ8NFY4 1073 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 OR8G5Q8NG78 346 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 RGP1Q92546 391 aaPredicted RBP11.28□□□□□ -0.6
HDAC1-208ENST00000482310 GHSRQ92847 366 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 UFD1Q92890 307 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 SMIM19Q96E16 107 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 OPALINQ96PE5 141 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 SORCS2Q96PQ0 1159 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 TMED9Q9BVK6 235 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 CXorf56Q9H5V9 222 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 TUBG2Q9NRH3 451 aa11.28□□□□□ -0.6
HDAC1-208ENST00000482310 F5H5P2 479 aa11.27□□□□□ -0.61
HDAC1-208ENST00000482310 OGG1O15527 345 aa11.27□□□□□ -0.61
HDAC1-208ENST00000482310 MLNRO43193 412 aa11.27□□□□□ -0.61
HDAC1-208ENST00000482310 MTRF1O75570 445 aaKnown RBP11.27□□□□□ -0.61
HDAC1-208ENST00000482310 INMTO95050 263 aa11.27□□□□□ -0.61
HDAC1-208ENST00000482310 IGHV1-46P01743 117 aa11.27□□□□□ -0.61
HDAC1-208ENST00000482310 BMP4P12644 408 aa11.27□□□□□ -0.61
HDAC1-208ENST00000482310 ZNF20P17024 532 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms