RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 DYNLT3P51808 116 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 TMEM30BQ3MIR4 351 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 VHLLQ6RSH7 139 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 BPIFB2Q8N4F0 458 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 OR5AR1Q8NGP9 310 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 CA5BP1Q8WTZ4 195 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 TP63Q9H3D4 680 aaPredicted RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 G6PC2Q9NQR9 355 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 TIMM10BQ9Y5J6 103 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 DDX60LQ5H9U9 1706 aaKnown RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 A0A1B0GV50 99 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 TBX19O60806 448 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 HLA-DQA1P01909 254 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 NPBWR2P48146 333 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 CLDN15P56746 228 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 BEX3Q00994 111 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 SLC25A30Q5SVS4 291 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 IER5LQ5T953 404 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 SLC35E4Q6ICL7 350 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 TBPL2Q6SJ96 375 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 TEPPQ6URK8 271 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 C15orf52Q6ZUT6 534 aaKnown RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 OR52M1Q8NGK5 317 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 OR13C6PQ8NH95 151 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 ACER1Q8TDN7 264 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 GPBAR1Q8TDU6 330 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 NKD2Q969F2 451 aaPredicted RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 KIR2DL4Q99706 377 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 FBLL1A6NHQ2 334 aaKnown RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 SCAMP2O15127 329 aaKnown RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 LDB3O75112 727 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 GIPP09681 153 aaPredicted RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 CD52P31358 61 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 SH3BP2P78314 561 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 RELQ04864 619 aaPredicted RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 SHBQ15464 509 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 CLLU1Q5K131 121 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 LAIR1Q6GTX8 287 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 KLHDC10Q6PID8 442 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 BHLHA15Q7RTS1 189 aaPredicted RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 SPICQ8N5J4 248 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 ISG20Q96AZ6 181 aaKnown RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 ALX4Q9H161 411 aaPredicted RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 NRN1Q9NPD7 142 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 TIMM13Q9Y5L4 95 aaPredicted RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 HEPACAM2A8MVW5 462 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 K7ERS5 55 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 MLNRO43193 412 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 LILRA1O75019 489 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 KLF8O95600 359 aaPredicted RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 UBE2L3P68036 154 aaKnown RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 RING1Q06587 406 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 MICBQ29980 383 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 MPV17L2Q567V2 206 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 ZNF534Q76KX8 674 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 LINC00596Q86U02 117 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 FBXL6Q8N531 539 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 TMEM239Q8WW34 195 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 TOX2Q96NM4 488 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 KCNMB3Q9NPA1 279 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 MED29Q9NX70 200 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 PSENENQ9NZ42 101 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 SLC27A5Q9Y2P5 690 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 AHCTF1Q8WYP5 2266 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 H3BQ85 93 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 UPK2O00526 184 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 CH25HO95992 272 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 SLC35E2BP0CK96 405 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 VSIG10L2P0DP72 767 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 MGMTP16455 207 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 SMPD1P17405 629 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 ZNF468Q5VIY5 522 aaPredicted RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 TMEM108Q6UXF1 575 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 SPNS3Q6ZMD2 512 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 OR10W1Q8NGF6 305 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 RGP1Q92546 391 aaPredicted RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 TSPAN32Q96QS1 320 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 FLRT3Q9NZU0 649 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 CLN8Q9UBY8 286 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 XRN1Q8IZH2 1706 aaKnown RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 UBE2Q2LH0YL09 131 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 MBTPS2O43462 519 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 ZNF737O75373 536 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 ITGB7P26010 798 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 HMGCLP35914 325 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 ACAA2P42765 397 aaKnown RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 TMEM115Q12893 351 aaPredicted RBP4.94□□□□□ -1.62
USF3-202ENST00000478658 LY6KQ17RY6 165 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 ELFN2Q5R3F8 820 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 ZNF787Q6DD87 383 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 CXCL17Q6UXB2 119 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 ADPRHL1Q8NDY3 354 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 FAM57AQ8TBR7 257 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 RPS4Y2Q8TD47 263 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 NEUROG1Q92886 237 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 PDXPQ96GD0 296 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 PIPOXQ9P0Z9 390 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 IQCF5A8MTL0 148 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 PRSS56P0CW18 603 aa4.94□□□□□ -1.62
USF3-202ENST00000478658 SLC6A12P48065 614 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms