RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 TAF9Q16594 264 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 SPRED2Q7Z698 418 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 TMPRSS13Q9BYE2 586 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 WBP1LQ9NX94 342 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 LHFPL2Q6ZUX7 228 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 ZPLD1Q8TCW7 415 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 HLA-CQ95604 372 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 CMBLQ96DG6 245 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 ZNF845Q96IR2 970 aaPredicted RBP14.89□□□□□ -0.03
TCOF1-206ENST00000445265 CNTD2Q9H8S5 307 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 CDAP32320 146 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 MECP2P51608 486 aaKnown RBP14.89□□□□□ -0.03
TCOF1-206ENST00000445265 F2RL1P55085 397 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 ETFDHQ16134 617 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 Q6ZRG5 221 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 RAB18Q9NP72 206 aa14.89□□□□□ -0.03
TCOF1-206ENST00000445265 ZNF587BE7ETH6 402 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 ERVH48-1M5A8F1 160 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 EFEMP2O95967 443 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 GP1BAP07359 652 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 FOLR1P15328 257 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 OPRM1P35372 400 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 NKX2-1P43699 371 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-206ENST00000445265 GPX8Q8TED1 209 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 PISDQ9UG56 409 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 RNF212BA8MTL3 300 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 NRG2O14511 850 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-206ENST00000445265 AADACL3Q5VUY0 350 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 PTCRAQ6ISU1 281 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-206ENST00000445265 DGAT2L6Q6ZPD8 337 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 ZNF611Q8N823 705 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 OR52N4Q8NGI2 321 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 HAS2Q92819 552 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 KIRREL1Q96J84 757 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 OR51B6Q9H340 312 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 MPC2O95563 127 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 NRASP01111 189 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 ANKRD34CP0C6C1 535 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 RAB5CP51148 216 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 SMAD4Q13485 552 aaKnown RBP14.88□□□□□ -0.03
TCOF1-206ENST00000445265 FHL5Q5TD97 284 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 TFAP2EQ6VUC0 442 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 CATSPERDQ86XM0 798 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 OR4D6Q8NGJ1 314 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 OR51F2Q8NH61 342 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 PPP1R35Q8TAP8 253 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 PTPMT1Q8WUK0 201 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-206ENST00000445265 SPACA1Q9HBV2 294 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 ZMIZ1Q9ULJ6 1067 aa14.88□□□□□ -0.03
TCOF1-206ENST00000445265 VSTM5A8MXK1 200 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 TXNL1O43396 289 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 MPZL1O95297 269 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 BGLAPP02818 100 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 HBG1P69891 147 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 HBG2P69892 147 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 SPEM1Q8N4L4 309 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 TMEM231Q9H6L2 316 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 NDRG3Q9UGV2 375 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 PCDHB10Q9UN67 800 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 CTXN2P0C2S0 81 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 FAHP16930 419 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 CYB561P49447 251 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 COL13A1Q5TAT6 717 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-206ENST00000445265 ASB5Q8WWX0 329 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 C14orf79Q96F83 325 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 ALX4Q9H161 411 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-206ENST00000445265 KCNK15Q9H427 330 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 TBX6O95947 436 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-206ENST00000445265 ADRA2CP18825 462 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 GSK3AP49840 483 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 ATPAF1Q5TC12 328 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-206ENST00000445265 IL34Q6ZMJ4 242 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 OR11G2Q8NGC1 345 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 UTP23Q9BRU9 249 aaKnown RBP14.87□□□□□ -0.03
TCOF1-206ENST00000445265 MFRPQ9BY79 579 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 SHISA3A0PJX4 238 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 TXNDC12O95881 172 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 IDH3GP51553 393 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-206ENST00000445265 UCK1Q9HA47 277 aa14.87□□□□□ -0.03
TCOF1-206ENST00000445265 STRAPQ9Y3F4 350 aaKnown RBP14.87□□□□□ -0.03
TCOF1-206ENST00000445265 FIGNL2A6NMB9 653 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 DFFBO76075 338 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 SUMF1Q8NBK3 374 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 OR5M9Q8NGP3 310 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 RTN4IP1Q8WWV3 396 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-206ENST00000445265 RBMXL1Q96E39 390 aaKnown RBP14.86□□□□□ -0.03
TCOF1-206ENST00000445265 FOXQ1Q9C009 403 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 CABIN1Q9Y6J0 2220 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 SHISA8B8ZZ34 492 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 ZNF354AO60765 605 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-206ENST00000445265 ASAH2BP0C7U1 165 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 IL2RGP31785 369 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 FAM199XQ6PEV8 388 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-206ENST00000445265 CTHRC1Q96CG8 243 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 SCARF2Q96GP6 870 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-206ENST00000445265 NIPSNAP3BQ9BS92 247 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 IGHV1OR15-9A0A0B4J2B8 117 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 HSPB6O14558 160 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 SFT2D2O95562 160 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 TMIGD3P0DMS9 266 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms