RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 PIANPQ8IYJ0 282 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 C15orf56Q8N910 161 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 RHEBL1Q8TAI7 183 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 LKAAEAR1Q8TD35 194 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 SMARCD2Q92925 531 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 RAB1CQ92928 201 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 CIDECQ96AQ7 238 aaPredicted RBP2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 RMI2Q96E14 147 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 PDXPQ96GD0 296 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 ZBED3Q96IU2 234 aaPredicted RBP2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 PANX2Q96RD6 677 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 RACGAP1Q9H0H5 632 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 PPA2Q9H2U2 334 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 MRPL47Q9HD33 250 aaKnown RBP2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 BFARQ9NZS9 450 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 CD84Q9UIB8 345 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 GMEB1Q9Y692 573 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 BZW2Q9Y6E2 419 aaKnown RBP2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 USP24Q9UPU5 2620 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 NCOR2Q9Y618 2525 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 ROBO3Q96MS0 1386 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 COL4A6Q14031 1691 aa2.22□□□□□ -2.05
AC003001.1-201ENST00000443247 SIPA1L1O43166 1804 aa2.21□□□□□ -2.05
AC003001.1-201ENST00000443247 XIRP2A4UGR9 3374 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 CEP250Q9BV73 2442 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 MROH7Q68CQ1 1323 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 MYH1P12882 1939 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 MIA3Q5JRA6 1907 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 IGLV3-22A0A075B6J6 115 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 KCNE1BA0A087WTH5 132 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 TRAV40A0A0B4J280 105 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 CIB4A0PJX0 185 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 OR5B21A6NL26 309 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 K7ERQ8 282 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 PSMD11O00231 422 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 POLR1CO15160 346 aaPredicted RBP2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 CETN3O15182 167 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 EIF3HO15372 352 aaKnown RBP eCLIP2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 MBP02144 154 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 SERPINE2P07093 398 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 CLTAP09496 248 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 SMIM10L1P0DMW3 83 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 PSMC3P17980 439 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 CELP19835 753 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 GTF2E2P29084 291 aaKnown RBP2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 RRM2P31350 389 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 UQCRFS1P47985 274 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 CCNG1P51959 295 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 CLDN18P56856 261 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 RAB10P61026 200 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 KCNJ2P63252 427 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 SLC7A9P82251 487 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 SYCP1Q15431 976 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 ZNF829Q3KNS6 432 aaPredicted RBP2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 HSDL1Q3SXM5 330 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 VAX1Q5SQQ9 334 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 MLIPQ5VWP3 458 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 FBXW9Q5XUX1 488 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 TWF2Q6IBS0 349 aaKnown RBP2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 SLC25A25Q6KCM7 469 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 SHISA6Q6ZSJ9 500 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 SLC25A48Q6ZT89 311 aaKnown RBP2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 LINC00173Q6ZV60 143 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 NIPA1Q7RTP0 329 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 UBALD2Q8IYN6 164 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 MYOCDQ8IZQ8 938 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 TCAIMQ8N3R3 496 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 B3GNT7Q8NFL0 401 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 OR9G4Q8NGQ1 327 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 ZNF461Q8TAF7 563 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 GEMIN6Q8WXD5 167 aaKnown RBP2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 C8orf44Q96CB5 159 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 MSANTD3Q96H12 275 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 SMIM10Q96HG1 83 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 PLEKHA8Q96JA3 519 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 GABARAPL3Q9BY60 117 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 SLC7A5P2Q9GIP4 190 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 UGT1A7Q9HAW7 530 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 UGT1A10Q9HAW8 530 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 UGT1A8Q9HAW9 530 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 NUP50Q9UKX7 468 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 CHD9Q3L8U1 2897 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 ZFHX2Q9C0A1 2572 aaPredicted RBP2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 CHD7Q9P2D1 2997 aa2.21□□□□□ -2.06
AC003001.1-201ENST00000443247 DCHS1Q96JQ0 3298 aa2.2□□□□□ -2.06
AC003001.1-201ENST00000443247 KBTBD11-OT1A0A1B0GTJ5 212 aa2.2□□□□□ -2.06
AC003001.1-201ENST00000443247 A0A1B0GVX0 72 aa2.2□□□□□ -2.06
AC003001.1-201ENST00000443247 OR6C74A6NCV1 312 aa2.2□□□□□ -2.06
AC003001.1-201ENST00000443247 SMCO2A6NFE2 343 aa2.2□□□□□ -2.06
AC003001.1-201ENST00000443247 BCKDKO14874 412 aa2.2□□□□□ -2.06
AC003001.1-201ENST00000443247 RRP8O43159 456 aaKnown RBP2.2□□□□□ -2.06
AC003001.1-201ENST00000443247 PSTPIP1O43586 416 aa2.2□□□□□ -2.06
AC003001.1-201ENST00000443247 CHST1O43916 411 aa2.2□□□□□ -2.06
AC003001.1-201ENST00000443247 CLPXO76031 633 aa2.2□□□□□ -2.06
AC003001.1-201ENST00000443247 SRP72O76094 671 aaKnown RBP2.2□□□□□ -2.06
AC003001.1-201ENST00000443247 RCBTB2O95199 551 aa2.2□□□□□ -2.06
AC003001.1-201ENST00000443247 C1orf105O95561 183 aa2.2□□□□□ -2.06
AC003001.1-201ENST00000443247 TSPAN13O95857 204 aa2.2□□□□□ -2.06
AC003001.1-201ENST00000443247 ADRA2AP08913 450 aa2.2□□□□□ -2.06
AC003001.1-201ENST00000443247 PRPS2P11908 318 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms