RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	TOP3A	Q13472	1001 aa	Predicted RBP	5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	IL18R1	Q13478	541 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SLC17A1	Q14916	467 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	PDCD1	Q15116	288 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SNAPC1	Q16533	368 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CR1L	Q2VPA4	569 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	MS4A18	Q3C1V0	323 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SLC25A35	Q3KQZ1	300 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	PDLIM3	Q53GG5	364 aa	Predicted RBP	5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SMARCD3	Q6STE5	483 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RASSF6	Q6ZTQ3	369 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CREB3L2	Q70SY1	520 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CXXC5	Q7LFL8	322 aa	Known RBP	5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	IGFN1	Q86VF2	1251 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SERPINA12	Q8IW75	414 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	PQLC1	Q8N2U9	271 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	MARVELD2	Q8N4S9	558 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SYT14	Q8NB59	555 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	OR6N1	Q8NGY5	312 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SSC4D	Q8WTU2	575 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	HSD17B8	Q92506	261 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	C20orf173	Q96LM9	149 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ZNF385A	Q96PM9	386 aa	Known RBP	5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	PRRT1	Q99946	306 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	TCEAL7	Q9BRU2	100 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	C2orf88	Q9BSF0	95 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ZNF2	Q9BSG1	426 aa	Predicted RBP	5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	HINT2	Q9BX68	163 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	POLDIP3	Q9BY77	421 aa	Known RBP	5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	UCK2	Q9BZX2	261 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	HIPK2	Q9H2X6	1198 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	OR52D1	Q9H346	318 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	KCNJ16	Q9NPI9	418 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SEC14L4	Q9UDX3	406 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	TBC1D24	Q9ULP9	559 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RCE1	Q9Y256	329 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	EXOG	Q9Y2C4	368 aa	Known RBP	5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	TNFRSF18	Q9Y5U5	241 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	FLVCR1	Q9Y5Y0	555 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	NUBP2	Q9Y5Y2	271 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	DNAJC13	O75165	2243 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	GTF3C1	Q12789	2109 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ZGRF1	Q86YA3	2104 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	FAM240B	A0A1B0GVZ2	78 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638		A6NIZ1	184 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	LOC110117498-PIK3R3	F6TDL0	507 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CDC42EP2	O14613	210 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ABCD4	O14678	606 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RGS10	O43665	173 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RAMP1	O60894	148 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	FZD7	O75084	574 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	TNFSF13	O75888	250 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	IGHG1	P01857	330 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	S100A8	P05109	93 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CD14	P08571	375 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	HLA-DOB	P13765	273 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	IGFBP5	P24593	272 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	MAS1L	P35410	378 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ACVR1B	P36896	505 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	OR3A3	P47888	321 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SRP9	P49458	86 aa	Known RBP	5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ASCL1	P50553	236 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ELL	P55199	621 aa	Predicted RBP	5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CLRN1	P58418	232 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RAP1B	P61224	184 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RPL27	P61353	136 aa	Known RBP	5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RAB11A	P62491	216 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RAP1A	P62834	184 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ERVK-25	P63136	954 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ITGAD	Q13349	1161 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	HNF4G	Q14541	408 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	MELK	Q14680	651 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	TRIP10	Q15642	601 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RAB11B	Q15907	218 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RFX4	Q33E94	735 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	LCE4A	Q5TA78	99 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	MBNL2	Q5VZF2	373 aa	Known RBP	5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	TEPP	Q6URK8	271 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	TMEM108	Q6UXF1	575 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	DPY19L2P2	Q6ZN68	376 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	NUFIP2	Q7Z417	695 aa	Known RBP	5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	TMEM179B	Q7Z7N9	219 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CATSPERD	Q86XM0	798 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	KLB	Q86Z14	1044 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	HS3ST5	Q8IZT8	346 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SPAG16	Q8N0X2	631 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CLDN22	Q8N7P3	220 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CSNK2A3	Q8NEV1	391 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	OR13C9	Q8NGT0	318 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	MAGEE2	Q8TD90	523 aa	Predicted RBP	5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	UFD1	Q92890	307 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	TMEM45B	Q96B21	275 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	DGCR14	Q96DF8	476 aa	Known RBP	5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RRNAD1	Q96FB5	475 aa	Known RBP	5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	NUDT11	Q96G61	164 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ZNF486	Q96H40	463 aa	Predicted RBP	5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RBP7	Q96R05	134 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	FEV	Q99581	238 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ASCL2	Q99929	193 aa		5.41	□□□□□ -1.54
ECHDC1-208	ENST00000436638	EMC6	Q9BV81	110 aa		5.41	□□□□□ -1.54

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