RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 OCSTAMPQ9BR26 566 aa13□□□□□ -0.33
DDX55-202ENST00000354291 TMEM100Q9NV29 134 aa13□□□□□ -0.33
DDX55-202ENST00000354291 LHFPL6Q9Y693 200 aa13□□□□□ -0.33
DDX55-202ENST00000354291 TENM2Q9NT68 2774 aa13□□□□□ -0.33
DDX55-202ENST00000354291 DYNC2H1Q8NCM8 4307 aaKnown RBP12.99□□□□□ -0.33
DDX55-202ENST00000354291 WI2-2373I1.2A0A1W2PRP0 233 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 FAM20BO75063 409 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 CD33P20138 364 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 EEF1B2P24534 225 aaKnown RBP12.99□□□□□ -0.33
DDX55-202ENST00000354291 GSSP48637 474 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 GNGT1P63211 74 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 MXRA7P84157 204 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 TSPAN31Q12999 210 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 ECH1Q13011 328 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 OR8B8Q15620 311 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 MEP1BQ16820 701 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 CDONQ4KMG0 1287 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 PGBD2Q6P3X8 592 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 PIGWQ7Z7B1 504 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.99□□□□□ -0.33
DDX55-202ENST00000354291 ZBTB46Q86UZ6 589 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 ZDHHC21Q8IVQ6 265 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 DEFB107AQ8IZN7 70 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 LINC00471Q8N535 108 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 SLC26A10Q8NG04 563 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 OR2AJ1Q8NGZ0 328 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 OR4K13Q8NH42 304 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 NPRL2Q8WTW4 380 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 CLPTM1LQ96KA5 538 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 RPRD1BQ9NQG5 326 aaKnown RBP12.99□□□□□ -0.33
DDX55-202ENST00000354291 ARL8BQ9NVJ2 186 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 ONECUT1Q9UBC0 465 aa12.99□□□□□ -0.33
DDX55-202ENST00000354291 A0A1B0GVI7 797 aa12.98□□□□□ -0.33
DDX55-202ENST00000354291 FBXO24O75426 580 aa12.98□□□□□ -0.33
DDX55-202ENST00000354291 CD28P10747 220 aa12.98□□□□□ -0.33
DDX55-202ENST00000354291 HMGA2P52926 109 aa12.98□□□□□ -0.33
DDX55-202ENST00000354291 LY6EQ16553 131 aa12.98□□□□□ -0.33
DDX55-202ENST00000354291 CLEC12AQ5QGZ9 265 aa12.98□□□□□ -0.33
DDX55-202ENST00000354291 PRAMEF6Q5VXH4 476 aa12.98□□□□□ -0.33
DDX55-202ENST00000354291 RPL13AP3Q6NVV1 102 aa12.98□□□□□ -0.33
DDX55-202ENST00000354291 CORO6Q6QEF8 472 aa12.98□□□□□ -0.33
DDX55-202ENST00000354291 PITX2Q99697 317 aa12.98□□□□□ -0.33
DDX55-202ENST00000354291 SIRT7Q9NRC8 400 aa12.98□□□□□ -0.33
DDX55-202ENST00000354291 SACSQ9NZJ4 4579 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 MEIOCA2RUB1 952 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 H3BUX3 64 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 LGALS8O00214 317 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 NPFFO15130 113 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 HLA-DQA2P01906 255 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 GYPAP02724 150 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 GATA4P43694 442 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 DLX1P56177 255 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 POU4F2Q12837 409 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 MAB21L1Q13394 359 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 MPPED2Q15777 294 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 SLC18B1Q6NT16 456 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 COLCA1Q6ZS62 124 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 OR52L1Q8NGH7 329 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 Q8TCH9 128 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 ST8SIA4Q92187 359 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 HCAR1Q9BXC0 346 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 WDR76Q9H967 626 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 ACTR3BQ9P1U1 418 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 RNF7Q9UBF6 113 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 KPTNQ9Y664 436 aa12.97□□□□□ -0.33
DDX55-202ENST00000354291 OR6C68A6NDL8 312 aa12.96□□□□□ -0.33
DDX55-202ENST00000354291 IQCF6A8MYZ5 107 aa12.96□□□□□ -0.33
DDX55-202ENST00000354291 DVL1O14640 695 aa12.96□□□□□ -0.33
DDX55-202ENST00000354291 ECDO95905 644 aaPredicted RBP12.96□□□□□ -0.33
DDX55-202ENST00000354291 GYS2P54840 703 aa12.96□□□□□ -0.33
DDX55-202ENST00000354291 PRSS12P56730 875 aa12.96□□□□□ -0.33
DDX55-202ENST00000354291 COL10A1Q03692 680 aa12.96□□□□□ -0.33
DDX55-202ENST00000354291 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.96□□□□□ -0.33
DDX55-202ENST00000354291 RSPO1Q2MKA7 263 aaPredicted RBP12.96□□□□□ -0.33
DDX55-202ENST00000354291 SLC35F1Q5T1Q4 408 aa12.96□□□□□ -0.33
DDX55-202ENST00000354291 LINC00346Q8IVM7 164 aa12.96□□□□□ -0.33
DDX55-202ENST00000354291 PNKDQ8N490 385 aa12.96□□□□□ -0.33
DDX55-202ENST00000354291 SDR9C7Q8NEX9 313 aa12.96□□□□□ -0.33
DDX55-202ENST00000354291 ERGIC1Q969X5 290 aa12.96□□□□□ -0.33
DDX55-202ENST00000354291 ATF6BQ99941 703 aa12.96□□□□□ -0.33
DDX55-202ENST00000354291 CYB5R1Q9UHQ9 305 aa12.96□□□□□ -0.33
DDX55-202ENST00000354291 KCNG2Q9UJ96 466 aa12.96□□□□□ -0.33
DDX55-202ENST00000354291 RPUSD1Q9UJJ7 312 aaKnown RBP12.96□□□□□ -0.33
DDX55-202ENST00000354291 TRAV38-1A0A0B4J264 116 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 F5H5K5 113 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 TNFRSF11BO00300 401 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 NDUFA2O43678 99 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 FCN3O75636 299 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 ACSM4P0C7M7 580 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 ZNF823P16415 610 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 GGT2P36268 569 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 GUCA2AQ02747 115 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 MALLQ13021 153 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 KLRD1Q13241 179 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 KRTAP27-1Q3LI81 207 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 CYP2R1Q6VVX0 501 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 CFAP77Q6ZQR2 320 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 NDUFA11Q86Y39 141 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 ARHGAP24Q8N264 748 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 SSX3Q99909 188 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms