RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 A0A1W2PR80 420 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 LDLRAD4O15165 306 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 SSX4O60224 188 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 CCNOP22674 350 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 UBE2V2Q15819 145 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 MYPOPQ86VE0 399 aaPredicted RBP18.37■□□□□ 0.53
VRK2-201ENST00000340157 ZNF610Q8N9Z0 462 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 CCDC54Q8NEL0 328 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 FOXRED1Q96CU9 486 aaPredicted RBP18.37■□□□□ 0.53
VRK2-201ENST00000340157 CHST5Q9GZS9 411 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 SP140LQ9H930 580 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 TUBD1Q9UJT1 453 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 RP1L1Q8IWN7 2480 aaPredicted RBP18.37■□□□□ 0.53
VRK2-201ENST00000340157 hCG_2014768A0A024R1R8 64 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 DHRS7CA6NNS2 312 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 LANCL1O43813 399 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 MTRF1O75570 445 aaKnown RBP18.37■□□□□ 0.53
VRK2-201ENST00000340157 HOXD11P31277 338 aaPredicted RBP18.37■□□□□ 0.53
VRK2-201ENST00000340157 TIMP3P35625 211 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 NR4A2P43354 598 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 FAM3AP98173 230 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 TGFBR3Q03167 851 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 TRIM16LQ309B1 348 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 UNQ6494/PRO21346Q6UXR6 183 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 NANOS1Q8WY41 292 aaKnown RBP18.37■□□□□ 0.53
VRK2-201ENST00000340157 TRIM63Q969Q1 353 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 SORCS2Q96PQ0 1159 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 RGCCQ9H4X1 137 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 ASF1BQ9NVP2 202 aa18.37■□□□□ 0.53
VRK2-201ENST00000340157 SPNP16150 400 aa18.36■□□□□ 0.53
VRK2-201ENST00000340157 CDK2P24941 298 aa18.36■□□□□ 0.53
VRK2-201ENST00000340157 UTS2BQ765I0 119 aa18.36■□□□□ 0.53
VRK2-201ENST00000340157 SEMA6DQ8NFY4 1073 aa18.36■□□□□ 0.53
VRK2-201ENST00000340157 RAB40AQ8WXH6 277 aa18.36■□□□□ 0.53
VRK2-201ENST00000340157 C10orf35Q96D05 121 aa18.36■□□□□ 0.53
VRK2-201ENST00000340157 BOD1Q96IK1 185 aa18.36■□□□□ 0.53
VRK2-201ENST00000340157 UQCC2Q9BRT2 126 aa18.36■□□□□ 0.53
VRK2-201ENST00000340157 ZNF391Q9UJN7 358 aa18.36■□□□□ 0.53
VRK2-201ENST00000340157 PROCRQ9UNN8 238 aa18.36■□□□□ 0.53
VRK2-201ENST00000340157 MRPS7Q9Y2R9 242 aaKnown RBP18.36■□□□□ 0.53
VRK2-201ENST00000340157 CIB4A0PJX0 185 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 PLA2G10O15496 165 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 CRHP06850 196 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 CELA3BP08861 270 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 ARSBP15848 533 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 ZNF14P17017 642 aaPredicted RBP18.35■□□□□ 0.53
VRK2-201ENST00000340157 ZNF93P35789 620 aaPredicted RBP18.35■□□□□ 0.53
VRK2-201ENST00000340157 PTH2RP49190 550 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 GSK3AP49840 483 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 PLP2Q04941 152 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 GDPD3Q7L5L3 318 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 PP6455Q8WZ26 134 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 LINC00854A0A1B0GVQ3 168 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 XRCC2O43543 280 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 CTAG2O75638 210 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 NGFP01138 241 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 ALDOBP05062 364 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 SERPINA5P05154 406 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 ERCC1P07992 297 aaPredicted RBP18.35■□□□□ 0.53
VRK2-201ENST00000340157 OCMP0CE72 109 aaPredicted RBP18.35■□□□□ 0.53
VRK2-201ENST00000340157 CEACAM8P31997 349 aaPredicted RBP18.35■□□□□ 0.53
VRK2-201ENST00000340157 WNT5AP41221 380 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 SCN1BQ07699 218 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 OR8B8Q15620 311 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 OR10K2Q6IF99 312 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 DOLPP1Q86YN1 238 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 ZNF101Q8IZC7 436 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 WDR31Q8NA23 367 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 ZCCHC14Q8WYQ9 949 aaKnown RBP18.35■□□□□ 0.53
VRK2-201ENST00000340157 S100A16Q96FQ6 103 aaKnown RBP18.35■□□□□ 0.53
VRK2-201ENST00000340157 COX4I2Q96KJ9 171 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 ZFP3Q96NJ6 502 aa18.35■□□□□ 0.53
VRK2-201ENST00000340157 MYEF2Q9P2K5 600 aaKnown RBP18.35■□□□□ 0.53
VRK2-201ENST00000340157 KDM4BO94953 1096 aa18.34■□□□□ 0.53
VRK2-201ENST00000340157 ALX3O95076 343 aa18.34■□□□□ 0.53
VRK2-201ENST00000340157 PTTG1O95997 202 aa18.34■□□□□ 0.53
VRK2-201ENST00000340157 IL2RAP01589 272 aa18.34■□□□□ 0.53
VRK2-201ENST00000340157 GLI4P10075 376 aa18.34■□□□□ 0.53
VRK2-201ENST00000340157 PRF1P14222 555 aa18.34■□□□□ 0.53
VRK2-201ENST00000340157 RFX2P48378 723 aa18.34■□□□□ 0.53
VRK2-201ENST00000340157 QRFPP83859 136 aa18.34■□□□□ 0.53
VRK2-201ENST00000340157 DGCR2P98153 550 aa18.34■□□□□ 0.53
VRK2-201ENST00000340157 ASAH1Q13510 395 aa18.34■□□□□ 0.53
VRK2-201ENST00000340157 BAIAP2L2Q6UXY1 529 aa18.34■□□□□ 0.53
VRK2-201ENST00000340157 CXorf67Q86X51 503 aaPredicted RBP18.34■□□□□ 0.53
VRK2-201ENST00000340157 MINDY2Q8NBR6 621 aa18.34■□□□□ 0.53
VRK2-201ENST00000340157 C1orf162Q8NEQ5 155 aaPredicted RBP18.34■□□□□ 0.53
VRK2-201ENST00000340157 SETD6Q8TBK2 473 aa18.34■□□□□ 0.53
VRK2-201ENST00000340157 NPRL2Q8WTW4 380 aa18.34■□□□□ 0.53
VRK2-201ENST00000340157 GCDHQ92947 438 aaPredicted RBP18.34■□□□□ 0.53
VRK2-201ENST00000340157 POFUT1Q9H488 388 aa18.34■□□□□ 0.53
VRK2-201ENST00000340157 HCKP08631 526 aa18.33■□□□□ 0.53
VRK2-201ENST00000340157 MMP15P51511 669 aa18.33■□□□□ 0.53
VRK2-201ENST00000340157 DEFA1P59665 94 aa18.33■□□□□ 0.53
VRK2-201ENST00000340157 DEFA3P59666 94 aa18.33■□□□□ 0.53
VRK2-201ENST00000340157 RIPPLY1Q0D2K3 151 aa18.33■□□□□ 0.53
VRK2-201ENST00000340157 TRIQKQ629K1 86 aa18.33■□□□□ 0.53
VRK2-201ENST00000340157 TMEM42Q69YG0 159 aa18.33■□□□□ 0.53
VRK2-201ENST00000340157 AKAP1Q92667 903 aaKnown RBP eCLIP18.33■□□□□ 0.53
VRK2-201ENST00000340157 APOBEC3DQ96AK3 386 aaPredicted RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms