RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ZNF534Q76KX8 674 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 SPACA9Q96E40 222 aaPredicted RBP10.97□□□□□ -0.65
PCF11-201ENST00000298281 CABLES2Q9BTV7 478 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 ESRP2Q9H6T0 727 aaKnown RBP10.97□□□□□ -0.65
PCF11-201ENST00000298281 LSM2Q9Y333 95 aaKnown RBP10.97□□□□□ -0.65
PCF11-201ENST00000298281 ABCA1O95477 2261 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 TARM1B6A8C7 271 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 SIX6O95475 246 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 RANP62826 216 aaKnown RBP10.97□□□□□ -0.65
PCF11-201ENST00000298281 KMT5CQ86Y97 462 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 OR2L13Q8N349 312 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 PLPP7Q8NBV4 271 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 C2CD4CQ8TF44 421 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 UBE2L5PA0A1B0GUS4 154 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 UMAD1C9J7I0 102 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 CDC14BO60729 498 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 HTR4Q13639 388 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 EMC4Q5J8M3 183 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 SNX11Q9Y5W9 270 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 CTDSP2O14595 271 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 TOX3O15405 576 aaPredicted RBP10.97□□□□□ -0.65
PCF11-201ENST00000298281 PCSK6P29122 969 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 ACAA2P42765 397 aaKnown RBP10.97□□□□□ -0.65
PCF11-201ENST00000298281 PPP1CAP62136 330 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 PRTGQ2VWP7 1150 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 OR52L2PQ8NGH6 319 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 NIT2Q9NQR4 276 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 PRDM7Q9NQW5 492 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 PSENENQ9NZ42 101 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 ZFC3H1O60293 1989 aaKnown RBP10.97□□□□□ -0.65
PCF11-201ENST00000298281 IGKV3D-11A0A0A0MRZ8 115 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 OOEPA6NGQ2 149 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 PRSS44E7EML9 344 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 IGKV3-11P04433 115 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 CD27P26842 260 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 RGS7BPQ6MZT1 257 aaPredicted RBP10.97□□□□□ -0.65
PCF11-201ENST00000298281 DCXRQ7Z4W1 244 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 SPRED1Q7Z699 444 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 OR6K3Q8NGY3 331 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 OR6S1Q8NH40 331 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 KIR3DX1Q9H7L2 352 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 IGKV3D-15A0A087WSY6 115 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 IGKV3-15P01624 115 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 ATP1B1P05026 303 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 TMEM52BQ4KMG9 183 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 RPUSD3Q6P087 351 aaKnown RBP10.97□□□□□ -0.65
PCF11-201ENST00000298281 PRDM14Q9GZV8 571 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 SLCO1B1Q9Y6L6 691 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 J3KTA2 159 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 SRP9P49458 86 aaKnown RBP10.96□□□□□ -0.65
PCF11-201ENST00000298281 PPP1CBP62140 327 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 IHHQ14623 411 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 PRSS8Q16651 343 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 LEXMQ3ZCV2 418 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 TMEM64Q6YI46 380 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 C5orf17Q8NAS9 161 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 PCNPQ8WW12 178 aaKnown RBP10.96□□□□□ -0.65
PCF11-201ENST00000298281 KISS1RQ969F8 398 aaPredicted RBP10.96□□□□□ -0.65
PCF11-201ENST00000298281 AQP10Q96PS8 301 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 GLIPR2Q9H4G4 154 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 TMEM231Q9H6L2 316 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 TMEM140Q9NV12 185 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 NUMBLQ9Y6R0 609 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 TRIM77I1YAP6 450 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 ST6GAL1P15907 406 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 ACP1P24666 158 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 KCNJ3P48549 501 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 KIAA1024LP59773 190 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 SNRPGP62308 76 aaKnown RBP10.96□□□□□ -0.65
PCF11-201ENST00000298281 CLN3Q13286 438 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 DUSP6Q16828 381 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 C1orf140Q5VVS0 124 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 PCED1AQ9H1Q7 454 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 A0A1W2PNV4 684 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 ADRA2CP18825 462 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 S100A11P31949 105 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 ASCL1P50553 236 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 ZNF841Q6ZN19 808 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 SLC7A10Q9NS82 523 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 B3GALT5Q9Y2C3 310 aa10.96□□□□□ -0.65
PCF11-201ENST00000298281 IZUMO4Q1ZYL8 232 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 B3GNT9Q6UX72 402 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 CSF3RQ99062 836 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 CADP27708 2225 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 ANKRD31Q8N7Z5 1873 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 SDCBPO00560 298 aaPredicted RBP10.96□□□□□ -0.66
PCF11-201ENST00000298281 ACHEP22303 614 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 RELBQ01201 579 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 RPS19BP1Q86WX3 136 aaKnown RBP10.96□□□□□ -0.66
PCF11-201ENST00000298281 OR1B1Q8NGR6 318 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 MYOZ3Q8TDC0 251 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 ADGRG7Q96K78 797 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 HRH3Q9Y5N1 445 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 G6PCP35575 357 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 WNT5AP41221 380 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 CCR9P51686 369 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 SEMA3BQ13214 749 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 ZNF528Q3MIS6 628 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 ABHD17CQ6PCB6 329 aa10.96□□□□□ -0.66
PCF11-201ENST00000298281 LHFPL2Q6ZUX7 228 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms