RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 COLCA1Q6ZS62 124 aa15.77■□□□□ 0.11
VIM-201ENST00000224237 UTS2BQ765I0 119 aa15.77■□□□□ 0.11
VIM-201ENST00000224237 CD163Q86VB7 1156 aa15.77■□□□□ 0.11
VIM-201ENST00000224237 CCDC36Q8IYA8 594 aa15.77■□□□□ 0.11
VIM-201ENST00000224237 OR5AS1Q8N127 324 aa15.77■□□□□ 0.11
VIM-201ENST00000224237 RFT1Q96AA3 541 aa15.77■□□□□ 0.11
VIM-201ENST00000224237 CNTD2Q9H8S5 307 aa15.77■□□□□ 0.11
VIM-201ENST00000224237 B3GNT2Q9NY97 397 aa15.77■□□□□ 0.11
VIM-201ENST00000224237 TMEM272A0A1B0GTI8 110 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 TPPPO94811 219 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 ALX3O95076 343 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 ALDOBP05062 364 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 CRHP06850 196 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 FAHP16930 419 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 FOXF2Q12947 444 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 TMEM69Q5SWH9 247 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 C1orf185Q5T7R7 199 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 SEM1Q6ZVN7 128 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 OR4D6Q8NGJ1 314 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 C15orf40Q8WUR7 153 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 AKAP1Q92667 903 aaKnown RBP eCLIP15.76■□□□□ 0.11
VIM-201ENST00000224237 ZFP3Q96NJ6 502 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 THAP7Q9BT49 309 aaPredicted RBP15.76■□□□□ 0.11
VIM-201ENST00000224237 PLSCR4Q9NRQ2 329 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 C5orf49A4QMS7 147 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 TNFSF13O75888 250 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 HCKP08631 526 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 COX5AP20674 150 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 CDK2P24941 298 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 HOXD11P31277 338 aaPredicted RBP15.76■□□□□ 0.11
VIM-201ENST00000224237 MNDAP41218 407 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 MAP2K3P46734 347 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 RIPPLY1Q0D2K3 151 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 RTL6Q6ICC9 239 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 ZNF584Q8IVC4 421 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 CISD2Q8N5K1 135 aaKnown RBP15.76■□□□□ 0.11
VIM-201ENST00000224237 FAM57AQ8TBR7 257 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 TRIM63Q969Q1 353 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 TUBD1Q9UJT1 453 aa15.76■□□□□ 0.11
VIM-201ENST00000224237 CIB4A0PJX0 185 aa15.75■□□□□ 0.11
VIM-201ENST00000224237 CTAG2O75638 210 aa15.75■□□□□ 0.11
VIM-201ENST00000224237 RAD51DO75771 328 aa15.75■□□□□ 0.11
VIM-201ENST00000224237 HOXD4P09016 255 aaPredicted RBP15.75■□□□□ 0.11
VIM-201ENST00000224237 EDN3P14138 238 aa15.75■□□□□ 0.11
VIM-201ENST00000224237 CCNOP22674 350 aa15.75■□□□□ 0.11
VIM-201ENST00000224237 APLNRP35414 380 aa15.75■□□□□ 0.11
VIM-201ENST00000224237 TDGF1P3P51864 188 aa15.75■□□□□ 0.11
VIM-201ENST00000224237 UBE2NP61088 152 aaKnown RBP15.75■□□□□ 0.11
VIM-201ENST00000224237 PLA2G7Q13093 441 aa15.75■□□□□ 0.11
VIM-201ENST00000224237 HACD4Q5VWC8 232 aa15.75■□□□□ 0.11
VIM-201ENST00000224237 IZUMO1Q8IYV9 350 aa15.75■□□□□ 0.11
VIM-201ENST00000224237 C1orf162Q8NEQ5 155 aaPredicted RBP15.75■□□□□ 0.11
VIM-201ENST00000224237 SPSB4Q96A44 273 aa15.75■□□□□ 0.11
VIM-201ENST00000224237 PTX4Q96A99 478 aa15.75■□□□□ 0.11
VIM-201ENST00000224237 POM121L2Q96KW2 1035 aa15.75■□□□□ 0.11
VIM-201ENST00000224237 PROCRQ9UNN8 238 aa15.75■□□□□ 0.11
VIM-201ENST00000224237 FAM215AQ9Y5M1 114 aa15.75■□□□□ 0.11
VIM-201ENST00000224237 IGKV1-9A0A0C4DH69 117 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 hCG_38984A0A1B0GV85 526 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 LINC00854A0A1B0GVQ3 168 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 LDLRAD4O15165 306 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 EEF1E1O43324 174 aaKnown RBP15.74■□□□□ 0.11
VIM-201ENST00000224237 XRCC3O43542 346 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 LYZL6O75951 148 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 TMIGD3P0DMS9 266 aaPredicted RBP15.74■□□□□ 0.11
VIM-201ENST00000224237 HOXB1P14653 301 aaPredicted RBP15.74■□□□□ 0.11
VIM-201ENST00000224237 ACKR3P25106 362 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 TIMP3P35625 211 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 EFNB2P52799 333 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 ZNF92Q03936 586 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 UNQ6494/PRO21346Q6UXR6 183 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 MDP1Q86V88 176 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 SMIM4Q8WVI0 70 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 APOBEC3DQ96AK3 386 aaPredicted RBP15.74■□□□□ 0.11
VIM-201ENST00000224237 PHF21AQ96BD5 680 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 BOD1Q96IK1 185 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 KCNK15Q9H427 330 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 DIABLOQ9NR28 239 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 RP1L1Q8IWN7 2480 aaPredicted RBP15.74■□□□□ 0.11
VIM-201ENST00000224237 GSTZ1O43708 216 aaPredicted RBP15.74■□□□□ 0.11
VIM-201ENST00000224237 BPNT1O95861 308 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 IL2RAP01589 272 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 PRF1P14222 555 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 SPNP16150 400 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 PTH2RP49190 550 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 MRPS10P82664 201 aaKnown RBP15.74■□□□□ 0.11
VIM-201ENST00000224237 FAM3AP98173 230 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 OR8B8Q15620 311 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 GABRA6Q16445 453 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 PRR30Q53SZ7 412 aaPredicted RBP15.74■□□□□ 0.11
VIM-201ENST00000224237 ZNF57Q68EA5 555 aaPredicted RBP15.74■□□□□ 0.11
VIM-201ENST00000224237 AWAT2Q6E213 333 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 GABRG1Q8N1C3 465 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 RPRMLQ8N4K4 120 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 SSC4DQ8WTU2 575 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 CHAC2Q8WUX2 184 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 ZCCHC14Q8WYQ9 949 aaKnown RBP15.74■□□□□ 0.11
VIM-201ENST00000224237 STARD4Q96DR4 205 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 FAM122AQ96E09 287 aa15.74■□□□□ 0.11
VIM-201ENST00000224237 SLC22A4Q9H015 551 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms