RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Olfr11Q60890 313 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 HepacamQ640R3 418 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Pptc7Q6NVE9 310 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Tas2r120Q7M721 295 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Thoc7Q7TMY4 204 aaKnown RBP13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr17Q7TRM9 315 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr374Q7TRY0 313 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Zdhhc25Q810M4 279 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Commd7Q8BG94 200 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Defb21Q8C5Z4 100 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Vmn1r192Q8K4C9 300 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Sco2Q8VCL2 255 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Mrps23Q8VE22 177 aaKnown RBP13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Pofut1Q91ZW2 393 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 TpbpbQ9CQC0 121 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 D10Wsu102eQ9CX66 185 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 SdhcQ9CZB0 169 aaKnown RBP13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Prkar1aQ9DBC7 381 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 BvesQ9ES83 358 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Tas2r105Q9JKT4 300 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Jmjd1cQ69ZK6 2350 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Urb1Q571H0 2274 aaKnown RBP13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm42517A0A1Y7VLQ2 374 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Kiaa1324A2AFS3 1009 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm438B1ASB3 393 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 SparcP07214 302 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 TtkP35761 856 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Serpinf1P97298 417 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 SryQ05738 395 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Atf4Q06507 349 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm5113Q3UGK8 141 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Acsf3Q3URE1 583 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Mab21l2Q8BPP1 359 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Arf2Q8BSL7 181 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Kctd20Q8CDD8 419 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Dcp1aQ91YD3 602 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 1700020A23RikQ9DA59 131 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Eif3kQ9DBZ5 218 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Vstm2bQ9JME9 285 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 A26c2A0A140LHE4 291 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Sdccag3A2AIW0 432 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Lmx1bO88609 395 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 S100a6P14069 89 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Cpt2P52825 658 aaKnown RBP13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Tmem14aP56983 99 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr90Q0VEL5 310 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Chst9Q76EC5 413 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Abhd17bQ7M759 288 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Cdk3Q80YP0 303 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Commd2Q8BXC6 199 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Abhd6Q8R2Y0 336 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr1094Q8VF13 330 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr970Q8VFN3 311 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Q91WE4 72 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Clint1Q99KN9 631 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Wdr61Q9ERF3 305 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm28710A0A1B0GR31 962 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Tmem201A2A8U2 664 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr1107A2AVB8 312 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm10428J3QNV7 132 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Ccr2P51683 373 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Ucp2P70406 309 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Tm7sf2Q71KT5 418 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Sulf2Q8CFG0 875 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 B4galt7Q8R087 327 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Vmn1r220Q8R272 298 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Klhl25Q8R2P1 589 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Naa40Q8VE10 237 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 PccbQ99MN9 541 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Slc7a11Q9WTR6 502 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 MokQ9WVS4 420 aa13.12□□□□□ -0.31
Nup88-202ENSMUST00000108530 Dock9Q8BIK4 2055 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 AI182371A2AS37 356 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Mfsd4b5E9PYY6 479 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Rdh16f1E9Q9P8 317 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gstp3F6RWR5 210 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Lin7bO88951 207 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Cnr1P47746 473 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Capza1P47753 286 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 CbfbQ08024 187 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Ccdc177Q3UHB8 706 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Coq8aQ60936 645 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Svs6Q64356 99 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Klhl9Q6ZPT1 617 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr1014Q7TR95 305 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr1013Q7TR96 305 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Fmr1nbQ80ZA7 238 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Utp15Q8C7V3 528 aaKnown RBP13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Vmn1r193Q8R258 319 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Crtac1Q8R555 646 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Ddb2Q99J79 432 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 FtmtQ9D5H4 237 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Samd8Q9DA37 478 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Zfp68Q9Z116 606 aa13.11□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm5225J3QPL3 108 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 P2rx6O54803 389 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Lyl1P27792 278 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Upk2P38575 184 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 TsxP70675 144 aa13.1□□□□□ -0.31
Nup88-202ENSMUST00000108530 Il9rQ01114 468 aa13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms