RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 SLX4IPQ5VYV7 408 aa15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 FAHD2BQ6P2I3 314 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 FAM57BQ71RH2 274 aa15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 SLC16A9Q7RTY1 509 aa15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 BCDIN3DQ7Z5W3 292 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 OR56B2PQ8NGI1 322 aa15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 FAHD2AQ96GK7 314 aa15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 CENPNQ96H22 339 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 SLC22A4Q9H015 551 aa15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 OPA3Q9H6K4 179 aa15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 PATZ1Q9HBE1 687 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 DNAJC27Q9NZQ0 273 aa15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 MRPL15Q9P015 296 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-202ENST00000593764 M0R129 80 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 TBX1O43435 398 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 GMDSO60547 372 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 ZNF205O95201 554 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 PTBP3O95758 552 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 APOC1P02654 83 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 H2BFMP0C1H6 154 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 MDH2P40926 338 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 ACTR3P61158 418 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 OR8G1Q15617 311 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 MPPED2Q15777 294 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 FAM201AQ5SY85 155 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 C12orf73Q69YU5 71 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 CCDC121Q6ZUS5 278 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 KLHL36Q8N4N3 616 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 SPICQ8N5J4 248 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 OR52H1Q8NGJ2 320 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 Q8TCH9 128 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 PYDC1Q8WXC3 89 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 CIB1Q99828 191 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 TMPRSS13Q9BYE2 586 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 YIPF3Q9GZM5 350 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 TMEM165Q9HC07 324 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 OAZ3Q9UMX2 235 aa15.52■□□□□ 0.08
SHKBP1-202ENST00000593764 F5H0A9 414 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 PHF1O43189 567 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 FSTL3O95633 263 aa15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 PNPP00491 289 aa15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 POLR2IP36954 125 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 SRP14P37108 136 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 DDOSTP39656 456 aa15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 LCN2P80188 198 aa15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 AADACL4Q5VUY2 407 aa15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 PRAMEF6Q5VXH4 476 aa15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 LRRN1Q6UXK5 716 aa15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 TCEANCQ8N8B7 351 aa15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 DVL3Q92997 716 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 ERGIC1Q969X5 290 aa15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 REEP6Q96HR9 211 aa15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 ADAT1Q9BUB4 502 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 SP140LQ9H930 580 aa15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 BRD7Q9NPI1 651 aa15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 PCDHB10Q9UN67 800 aa15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 NOP16Q9Y3C1 178 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-202ENST00000593764 hCG_38984A0A1B0GV85 526 aa15.5■□□□□ 0.07
SHKBP1-202ENST00000593764 H3BNX3 289 aa15.5■□□□□ 0.07
SHKBP1-202ENST00000593764 FAM20BO75063 409 aa15.5■□□□□ 0.07
SHKBP1-202ENST00000593764 SEC61A1P61619 476 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-202ENST00000593764 KPNB1Q14974 876 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-202ENST00000593764 TIGD6Q17RP2 521 aa15.5■□□□□ 0.07
SHKBP1-202ENST00000593764 TMEM163Q8TC26 289 aa15.5■□□□□ 0.07
SHKBP1-202ENST00000593764 OSBPL10Q9BXB5 764 aa15.5■□□□□ 0.07
SHKBP1-202ENST00000593764 UFSP2Q9NUQ7 469 aa15.5■□□□□ 0.07
SHKBP1-202ENST00000593764 LAMP5Q9UJQ1 280 aa15.5■□□□□ 0.07
SHKBP1-202ENST00000593764 POLR3KQ9Y2Y1 108 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-202ENST00000593764 LRP12Q9Y561 859 aa15.5■□□□□ 0.07
SHKBP1-202ENST00000593764 A0A0G2JMP0 313 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 A0A0X1KG70 313 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 LRRC30A6NM36 301 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 CEACAM18A8MTB9 384 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 PRR32B1ATL7 298 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 FOXH1O75593 365 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 MRPL3P09001 348 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 WNT2P09544 360 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 GSK3AP49840 483 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 HOXA4Q00056 320 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 DCAF12L2Q5VW00 463 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 MEPCEQ7L2J0 689 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 KLBQ86Z14 1044 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 MUC20Q8N307 709 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 PLPP7Q8NBV4 271 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 OR4M2Q8NGB6 313 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 PGAM5Q96HS1 289 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 PKP2Q99959 881 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 TMEM246Q9BRR3 403 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 PRRG3Q9BZD7 231 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 OR10A2Q9H208 303 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 PPP1R3EQ9H7J1 279 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 NIPAL2Q9H841 368 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 COPS3Q9UNS2 423 aa15.49■□□□□ 0.07
SHKBP1-202ENST00000593764 PPIAL4EA0A075B759 164 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 PPIAL4CA0A0B4J2A2 164 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 SAC3D1A6NKF1 404 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 PPIAL4DF5H284 164 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 TRAPPC2LH3BP13 241 aa15.48■□□□□ 0.07
SHKBP1-202ENST00000593764 PSMD9O00233 223 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms