RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 ZNF593O00488 134 aaPredicted RBP8.66□□□□□ -1.02
SDF2-209ENST00000591903 MRPS14O60783 128 aaKnown RBP8.66□□□□□ -1.02
SDF2-209ENST00000591903 ENTPD6O75354 484 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 ZNF254O75437 659 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 FADS2O95864 444 aaKnown RBP8.66□□□□□ -1.02
SDF2-209ENST00000591903 KNG1P01042 644 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 IGHA1P01876 353 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 HLA-HP01893 362 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 LYNP07948 512 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 CELA3BP08861 270 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 GNAO1P09471 354 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 DBTP11182 482 aaKnown RBP8.66□□□□□ -1.02
SDF2-209ENST00000591903 CD79AP11912 226 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 ALOX5APP20292 161 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 MDKP21741 143 aaPredicted RBP8.66□□□□□ -1.02
SDF2-209ENST00000591903 DCKP27707 260 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 RGS6P49758 472 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 GRB2P62993 217 aaKnown RBP8.66□□□□□ -1.02
SDF2-209ENST00000591903 TUBA1BP68363 451 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 TUBA4AP68366 448 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 PSG4Q00888 419 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 ZNF91Q05481 1191 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 MRPL28Q13084 256 aaKnown RBP8.66□□□□□ -1.02
SDF2-209ENST00000591903 MED21Q13503 144 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 KRTAP27-1Q3LI81 207 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 ARMCX4Q5H9R4 360 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 RNLSQ5VYX0 342 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 ARL9Q6T311 187 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 TUBA1AQ71U36 451 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 VASH1Q7L8A9 365 aaPredicted RBP8.66□□□□□ -1.02
SDF2-209ENST00000591903 DPY19L4Q7Z388 723 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 KCTD20Q7Z5Y7 419 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 MDP1Q86V88 176 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 ERI1Q8IV48 349 aaKnown RBP8.66□□□□□ -1.02
SDF2-209ENST00000591903 LRRC18Q8N456 261 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 ZNF511Q8NB15 262 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 OR6N2Q8NGY6 317 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 ST7LQ8TDW4 575 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 RNF133Q8WVZ7 376 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 OTULINQ96BN8 352 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 DUX5Q96PT3 197 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 SH3GL3Q99963 347 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 RERGLQ9H628 205 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 RNF121Q9H920 327 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 SP140LQ9H930 580 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 FGF20Q9NP95 211 aaPredicted RBP8.66□□□□□ -1.02
SDF2-209ENST00000591903 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.66□□□□□ -1.02
SDF2-209ENST00000591903 PLEK2Q9NYT0 353 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 DNAJC27Q9NZQ0 273 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 OPN4Q9UHM6 478 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 NUP50Q9UKX7 468 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 BLOC1S6Q9UL45 172 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 LRRC42Q9Y546 428 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 ARHGAP32A7KAX9 2087 aa8.66□□□□□ -1.02
SDF2-209ENST00000591903 PPIAL4EA0A075B759 164 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 PPIAL4CA0A0B4J2A2 164 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 ZNF503-AS2A6NEH8 195 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 ACOD1A6NK06 481 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 ZNF670-ZNF695F2Z2N8 137 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 PPIAL4DF5H284 164 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 DOK2O60496 412 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 SULT1C4O75897 302 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 SEC14L2O76054 403 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 CLIC3O95833 236 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 IGHV2-5P01817 119 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 SCG5P05408 212 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 RPSAP08865 295 aaKnown RBP8.65□□□□□ -1.02
SDF2-209ENST00000591903 PPIAL4FP0DN26 164 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 STOMP27105 288 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 APLNRP35414 380 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 GLRXP35754 106 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 ALDH3B1P43353 468 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 TBC1D28Q2M2D7 210 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 PABPC1L2AQ5JQF8 200 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 RBM48Q5RL73 367 aaKnown RBP8.65□□□□□ -1.02
SDF2-209ENST00000591903 C6orf141Q5SZD1 244 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 MYPOPQ86VE0 399 aaPredicted RBP8.65□□□□□ -1.02
SDF2-209ENST00000591903 ZNF584Q8IVC4 421 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 ACBD7Q8N6N7 88 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 OR51L1Q8NGJ5 315 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 WFDC12Q8WWY7 111 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 UBE2FQ969M7 185 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 TMIGD2Q96BF3 282 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 POM121L2Q96KW2 1035 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 C1orf147Q96MC9 270 aaPredicted RBP8.65□□□□□ -1.02
SDF2-209ENST00000591903 ATF6BQ99941 703 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 ABHD6Q9BV23 337 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 C1QTNF5Q9BXJ0 243 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 WNT5BQ9H1J7 359 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 EMC7Q9NPA0 242 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 PNRC2Q9NPJ4 139 aaKnown RBP8.65□□□□□ -1.02
SDF2-209ENST00000591903 TBCCD1Q9NVR7 557 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 SCN3BQ9NY72 215 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 GPR160Q9UJ42 338 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 LAMP5Q9UJQ1 280 aa8.65□□□□□ -1.02
SDF2-209ENST00000591903 TVP23AA6NH52 213 aa8.64□□□□□ -1.03
SDF2-209ENST00000591903 M0R129 80 aa8.64□□□□□ -1.03
SDF2-209ENST00000591903 RER1O15258 196 aa8.64□□□□□ -1.03
SDF2-209ENST00000591903 NCR1O76036 304 aa8.64□□□□□ -1.03
SDF2-209ENST00000591903 SPARCP09486 303 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms