RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 RNF122Q9H9V4 155 aa4.08□□□□□ -1.76
ZNF540-204ENST00000586792 C12orf4Q9NQ89 552 aa4.08□□□□□ -1.76
ZNF540-204ENST00000586792 EXOSC3Q9NQT5 275 aaKnown RBP4.08□□□□□ -1.76
ZNF540-204ENST00000586792 ZNF226Q9NYT6 803 aa4.08□□□□□ -1.76
ZNF540-204ENST00000586792 ONECUT1Q9UBC0 465 aa4.08□□□□□ -1.76
ZNF540-204ENST00000586792 RPS6KB2Q9UBS0 482 aa4.08□□□□□ -1.76
ZNF540-204ENST00000586792 NUP50Q9UKX7 468 aa4.08□□□□□ -1.76
ZNF540-204ENST00000586792 TBC1D24Q9ULP9 559 aa4.08□□□□□ -1.76
ZNF540-204ENST00000586792 ICAM5Q9UMF0 924 aa4.08□□□□□ -1.76
ZNF540-204ENST00000586792 RNF24Q9Y225 148 aa4.08□□□□□ -1.76
ZNF540-204ENST00000586792 KCNE3Q9Y6H6 103 aa4.08□□□□□ -1.76
ZNF540-204ENST00000586792 CNTRLQ7Z7A1 2325 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 A0A0U1RRA0 63 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 A0A1W2PP18 115 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 TMEM129A0AVI4 362 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 SH3PXD2BA1X283 911 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 SMCO3A2RU48 225 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 PRORSD1PA6NEY8 169 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 NPIPB9F8W1W9 429 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 SULT2B1O00204 365 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 SS18L1O75177 396 aaPredicted RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 BCAS1O75363 584 aaPredicted RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 AHSA1O95433 338 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 CRYZL1O95825 349 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 HLA-DQA2P01906 255 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 IL12AP29459 219 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 DCTDP32321 178 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 CD79BP40259 229 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 RPS5P46782 204 aaKnown RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 IDH2P48735 452 aaKnown RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 MRPL19P49406 292 aaKnown RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 PPT1P50897 306 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 POLR2HP52434 150 aaKnown RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 SUMO2P61956 95 aaKnown RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 DLK1P80370 383 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 MYBPC1Q00872 1141 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 FUT5Q11128 374 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 CAPRIN1Q14444 709 aaKnown RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 TOMM34Q15785 309 aaPredicted RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 ZNF239Q16600 458 aaKnown RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 TMEM44Q2T9K0 475 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 MOGAT2Q3SYC2 334 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 TMEM176BQ3YBM2 270 aaPredicted RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 SYT14P1Q58G82 188 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 SLC25A53Q5H9E4 307 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 MRPL2Q5T653 305 aaKnown RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 METTL21CQ5VZV1 264 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 TMEM225Q6GV28 225 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 C1orf94Q6P1W5 598 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 PLXDC2Q6UX71 529 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 FCRLAQ7L513 359 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 BHLHA15Q7RTS1 189 aaPredicted RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 OLIG3Q7RTU3 272 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 HMGN2P46Q86SG4 172 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 DHDDSQ86SQ9 333 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 TBC1D26Q86UD7 250 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 TGIF2LXQ8IUE1 241 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 IZUMO1Q8IYV9 350 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 CADM2Q8N3J6 435 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 IQCF1Q8N6M8 205 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 OR13C9Q8NGT0 318 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 GPR119Q8TDV5 335 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 CHPT1Q8WUD6 406 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 NUDCD2Q8WVJ2 157 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 GTF2H4Q92759 462 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 OSTF1Q92882 214 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 MOB3AQ96BX8 217 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 AURKBQ96GD4 344 aaPredicted RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 TMEM19Q96HH6 336 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 OPALINQ96PE5 141 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 ZNF317Q96PQ6 595 aaPredicted RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 RAB40CQ96S21 281 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 DDOQ99489 341 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 RBM4BQ9BQ04 359 aaKnown RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 FAM110AQ9BQ89 295 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 PSD2Q9BQI7 771 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 RBM4Q9BWF3 364 aaKnown RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 TAPBPLQ9BX59 468 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 OPN3Q9H1Y3 402 aaPredicted RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 SLC38A1Q9H2H9 487 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 ANGPT4Q9Y264 503 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 ZNF443Q9Y2A4 671 aaPredicted RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 PIGLQ9Y2B2 252 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 HIVEP3Q5T1R4 2406 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 NINQ8N4C6 2090 aa4.07□□□□□ -1.76
ZNF540-204ENST00000586792 ASH1LQ9NR48 2969 aaKnown RBP4.07□□□□□ -1.76
ZNF540-204ENST00000586792 NBASA2RRP1 2371 aa4.06□□□□□ -1.76
ZNF540-204ENST00000586792 GTF3C1Q12789 2109 aa4.06□□□□□ -1.76
ZNF540-204ENST00000586792 HCFC1P51610 2035 aa4.06□□□□□ -1.76
ZNF540-204ENST00000586792 TRAV26-1A0A087WT03 109 aa4.06□□□□□ -1.76
ZNF540-204ENST00000586792 TMED7-TICAM2A0A0A6YYA0 188 aa4.06□□□□□ -1.76
ZNF540-204ENST00000586792 IGHV3-15A0A0B4J1V0 119 aa4.06□□□□□ -1.76
ZNF540-204ENST00000586792 A0A0J9YW62 118 aa4.06□□□□□ -1.76
ZNF540-204ENST00000586792 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.06□□□□□ -1.76
ZNF540-204ENST00000586792 A6NNC1 897 aa4.06□□□□□ -1.76
ZNF540-204ENST00000586792 BBIP1A8MTZ0 92 aa4.06□□□□□ -1.76
ZNF540-204ENST00000586792 C17orf100A8MU93 164 aa4.06□□□□□ -1.76
ZNF540-204ENST00000586792 B4DXG7 233 aa4.06□□□□□ -1.76
ZNF540-204ENST00000586792 C16orf97H3BN30 126 aa4.06□□□□□ -1.76
ZNF540-204ENST00000586792 IFNL4K9M1U5 179 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms