RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 GNGT1P63211 74 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 IL13RA1P78552 427 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 PPP1R8Q12972 351 aaKnown RBP13.99□□□□□ -0.17
CPSF1-207ENST00000531727 TAF13Q15543 124 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 TEX30Q5JUR7 227 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 PRR31Q5SQ13 230 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 SFRP4Q6FHJ7 346 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-207ENST00000531727 BOLLQ8N9W6 283 aaKnown RBP13.99□□□□□ -0.17
CPSF1-207ENST00000531727 ZNF511Q8NB15 262 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 OR4Q3Q8NH05 313 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 MMADHCQ9H3L0 296 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-207ENST00000531727 MAGIXQ9H6Y5 334 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 UNKLQ9H9P5 680 aaKnown RBP13.99□□□□□ -0.17
CPSF1-207ENST00000531727 TRIM36Q9NQ86 728 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 CENPMQ9NSP4 180 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 ERVK-18Q9QC07 812 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 BAIAP2Q9UQB8 552 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-207ENST00000531727 TCRBV5S2A0A599 114 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 C3orf80F5H4A9 247 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 ZNF593O00488 134 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-207ENST00000531727 XRCC2O43543 280 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 NDUFA2O43678 99 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 SOX14O95416 240 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 CLUP10909 449 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 SLC2A1P11166 492 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 GYS2P54840 703 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 BPIFB3P59826 476 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 OR8B8Q15620 311 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 DEFB112Q30KQ8 113 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 GPR157Q5UAW9 335 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 CD276Q5ZPR3 534 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 BRD3OSQ6XYD6 125 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 OR2T33Q8NG76 320 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 OR56B2PQ8NGI1 322 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 SPSB4Q96A44 273 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 DGCR6LQ9BY27 220 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 MUC13Q9H3R2 512 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 PRDM13Q9H4Q3 707 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 ZNF696Q9H7X3 374 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 ARMC1Q9NVT9 282 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 C1orf123Q9NWV4 160 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 VNN3Q9NY84 501 aa13.98□□□□□ -0.17
CPSF1-207ENST00000531727 TRAV38-1A0A0B4J264 116 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 OOEPA6NGQ2 149 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 POM121CA8CG34 1229 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 TNFRSF13BO14836 293 aaPredicted RBP13.97□□□□□ -0.17
CPSF1-207ENST00000531727 HOXA3O43365 443 aaPredicted RBP13.97□□□□□ -0.17
CPSF1-207ENST00000531727 ADAM20O43506 726 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 LIPFP07098 398 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 GRPP07492 148 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 CFHR2P36980 270 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 DDOSTP39656 456 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 BLVRAP53004 296 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 GRB2P62993 217 aaKnown RBP13.97□□□□□ -0.17
CPSF1-207ENST00000531727 MZT1Q08AG7 82 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 MICAQ29983 383 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 OR2T5Q6IEZ7 315 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 LCN8Q6JVE9 175 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 C16orf87Q6PH81 154 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 ARHGAP24Q8N264 748 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 OR6K6Q8NGW6 343 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 OR2T29Q8NH02 315 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 PCGF1Q9BSM1 259 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 REEP1Q9H902 201 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 C14orf119Q9NWQ9 140 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 N6AMT1Q9Y5N5 214 aa13.97□□□□□ -0.17
CPSF1-207ENST00000531727 DHRS12A0PJE2 317 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 A6NLC8 198 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 ZNF879B4DU55 563 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 P2RY10O00398 339 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 IFNGP01579 166 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 SFTPBP07988 381 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 ZNF3P17036 446 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 SLC15A1P46059 708 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 CX3CR1P49238 355 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 EIF2B1Q14232 305 aaKnown RBP13.96□□□□□ -0.17
CPSF1-207ENST00000531727 LINC01590Q5TEZ4 76 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 ZNF826PQ6ZT77 177 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 SPATC1Q76KD6 591 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 DHFR2Q86XF0 187 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 GCSAMQ8N6F7 178 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 ZDHHC16Q969W1 377 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 TOR3AQ9H497 397 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 SMURF1Q9HCE7 757 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 SAMHD1Q9Y3Z3 626 aaKnown RBP13.96□□□□□ -0.17
CPSF1-207ENST00000531727 U3KQV3 271 aa13.96□□□□□ -0.17
CPSF1-207ENST00000531727 hCG_1807616A0A1W2PRN6 198 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 RIIAD1A6NNX1 92 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 ANKRD30BLA7E2S9 258 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 B2RBV5 119 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 SRRM5B3KS81 715 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 TBX1O43435 398 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 WIPF1O43516 503 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 TOX4O94842 621 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 LHBP01229 141 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 GYPAP02724 150 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 MMP9P14780 707 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 FAM3AP98173 230 aa13.95□□□□□ -0.18
CPSF1-207ENST00000531727 TIGD6Q17RP2 521 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms