RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 DRAM2Q6UX65 266 aa8.88□□□□□ -0.99
NELFE-213ENST00000494956 FAM57BQ71RH2 274 aa8.88□□□□□ -0.99
NELFE-213ENST00000494956 CPOQ8IVL8 374 aa8.88□□□□□ -0.99
NELFE-213ENST00000494956 TIGD4Q8IY51 512 aa8.88□□□□□ -0.99
NELFE-213ENST00000494956 BCL6BQ8N143 479 aaPredicted RBP8.88□□□□□ -0.99
NELFE-213ENST00000494956 SGK3Q96BR1 496 aa8.88□□□□□ -0.99
NELFE-213ENST00000494956 ADAT1Q9BUB4 502 aaKnown RBP8.88□□□□□ -0.99
NELFE-213ENST00000494956 ESM1Q9NQ30 184 aa8.88□□□□□ -0.99
NELFE-213ENST00000494956 INSIG2Q9Y5U4 225 aa8.88□□□□□ -0.99
NELFE-213ENST00000494956 PPIAL4EA0A075B759 164 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 ARRDC5A6NEK1 342 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 PRR23D1E9PI22 279 aaPredicted RBP8.87□□□□□ -0.99
NELFE-213ENST00000494956 PPIAL4DF5H284 164 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 J3QLI3 93 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 GSC2O15499 205 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 MITFO75030 526 aaPredicted RBP8.87□□□□□ -0.99
NELFE-213ENST00000494956 FSHBP01225 129 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 GRPP07492 148 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 PRR23D2P0DMB1 279 aaPredicted RBP8.87□□□□□ -0.99
NELFE-213ENST00000494956 PPIAL4FP0DN26 164 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 OSMP13725 252 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 RPS2P15880 293 aaKnown RBP8.87□□□□□ -0.99
NELFE-213ENST00000494956 ZNF12P17014 697 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 CD200P41217 278 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 GATA4P43694 442 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 ZNF121P58317 390 aaPredicted RBP8.87□□□□□ -0.99
NELFE-213ENST00000494956 CDK5Q00535 292 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 ZNF404Q494X3 552 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 ESCO2Q56NI9 601 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 KLF17Q5JT82 389 aaPredicted RBP8.87□□□□□ -0.99
NELFE-213ENST00000494956 SLC16A9Q7RTY1 509 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 PRSS45Q7RTY3 260 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 BCDIN3DQ7Z5W3 292 aaKnown RBP8.87□□□□□ -0.99
NELFE-213ENST00000494956 WDR86Q86TI4 376 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 KLBQ86Z14 1044 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 NANPQ8TBE9 248 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 THEM6Q8WUY1 208 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 DUX5Q96PT3 197 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 SSBP3Q9BWW4 388 aaPredicted RBP8.87□□□□□ -0.99
NELFE-213ENST00000494956 TTTY10Q9BZA0 68 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 MARCH7Q9H992 704 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 CTSZQ9UBR2 303 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 DNAJB9Q9UBS3 223 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 ZNF69Q9UC07 566 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 PPIAL4AQ9Y536 164 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 STAB1Q9NY15 2570 aa8.87□□□□□ -0.99
NELFE-213ENST00000494956 IGHV3OR15-7A0A075B7D8 119 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 A8MXK9 166 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 PSMD9O00233 223 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 MRPL3P09001 348 aaKnown RBP8.86□□□□□ -0.99
NELFE-213ENST00000494956 EGR1P18146 543 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 HSD11B1P28845 292 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 OPRL1P41146 370 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 DAPP51397 102 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 RPS7P62081 194 aaKnown RBP8.86□□□□□ -0.99
NELFE-213ENST00000494956 GNB2P62879 340 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 FAM3AP98173 230 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 PAX2Q02962 417 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 BNIP1Q12981 228 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 ZNF181Q2M3W8 571 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 LRRN1Q6UXK5 716 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 MUC20Q8N307 709 aaPredicted RBP8.86□□□□□ -0.99
NELFE-213ENST00000494956 FGFRL1Q8N441 504 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 PAPD5Q8NDF8 572 aaKnown RBP8.86□□□□□ -0.99
NELFE-213ENST00000494956 ZNF418Q8TF45 676 aaPredicted RBP8.86□□□□□ -0.99
NELFE-213ENST00000494956 RNF133Q8WVZ7 376 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 SPSB4Q96A44 273 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 SEH1LQ96EE3 360 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 REEP6Q96HR9 211 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 RASSF4Q9H2L5 321 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 ZNF556Q9HAH1 456 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 C1orf123Q9NWV4 160 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 TVP23BQ9NYZ1 205 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 POLR3KQ9Y2Y1 108 aaPredicted RBP8.86□□□□□ -0.99
NELFE-213ENST00000494956 AUP1Q9Y679 476 aa8.86□□□□□ -0.99
NELFE-213ENST00000494956 PPIAL4CA0A0B4J2A2 164 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 hCG_38984A0A1B0GV85 526 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 A6NLC8 198 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 LRRC30A6NM36 301 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 PRR32B1ATL7 298 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 IFNL4K9M1U5 179 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 XRCC2O43543 280 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 FCN3O75636 299 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 H2BFMP0C1H6 154 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 IGHV4-38-2P0DP08 117 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 ANXA8P13928 327 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 PAICSP22234 425 aaKnown RBP8.85□□□□□ -0.99
NELFE-213ENST00000494956 SLC2A5P22732 501 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 GATA3P23771 443 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 EPHA2P29317 976 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 SLC15A1P46059 708 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 PITPNBP48739 271 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 BLVRAP53004 296 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 CRISP1P54107 249 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 HILS1P60008 231 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 GRB2P62993 217 aaKnown RBP8.85□□□□□ -0.99
NELFE-213ENST00000494956 CSNK2BP67870 215 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 APOFQ13790 326 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 GK3PQ14409 553 aa8.85□□□□□ -0.99
NELFE-213ENST00000494956 OR8B8Q15620 311 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms