RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 KIR2DS1A0A191URI9 304 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 TVP23AA6NH52 213 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 ZNF593O00488 134 aaPredicted RBP8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 GMDSO60547 372 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 FKBP6O75344 327 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 CYB5R3P00387 301 aaPredicted RBP8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 HLA-DQA2P01906 255 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 RAP2AP10114 183 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 FPR2P25090 351 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 FMO3P31513 532 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 ENTPD1P49961 510 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 ELF3P78545 371 aaPredicted RBP8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 KPNB1Q14974 876 aaKnown RBP8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 MPPED2Q15777 294 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 ESCO2Q56NI9 601 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 C9orf139Q6ZV77 190 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 DOK3Q7L591 496 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 DCXRQ7Z4W1 244 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 BHLHE23Q8NDY6 225 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 PROKR2Q8NFJ6 384 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 OR51L1Q8NGJ5 315 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 UPRTQ96BW1 309 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 FEVQ99581 238 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 SLC6A7Q99884 636 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 PRDM13Q9H4Q3 707 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 NTN4Q9HB63 628 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 MRPL15Q9P015 296 aaKnown RBP8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 NUP50Q9UKX7 468 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 NOP16Q9Y3C1 178 aaKnown RBP8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 U3KQV3 271 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 ANK2Q01484 3957 aa8.12□□□□□ -1.11
TMEM39A-210ENST00000490099 IGHV2-70DA0A0C4DH43 119 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 TCRBV3S1A0A5B6 114 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 DHRS12A0PJE2 317 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 LRRC30A6NM36 301 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 TRIM77I1YAP6 450 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 FAM20BO75063 409 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 SOX14O95416 240 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 LHBP01229 141 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 CLUP10909 449 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 CA6P23280 308 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 CFPP27918 469 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 GRK5P34947 590 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 DDOSTP39656 456 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 FAM201AQ5SY85 155 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 GLYATL3Q5SZD4 288 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 DCDC5Q6ZRR9 648 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 KRT74Q7RTS7 529 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 MRPL21Q7Z2W9 205 aaKnown RBP8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 TMEM179BQ7Z7N9 219 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 TIGD4Q8IY51 512 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 C1orf87Q8N0U7 546 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 SPERTQ8NA61 448 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 PAPD5Q8NDF8 572 aaKnown RBP8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 OR10G2Q8NGC3 310 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 OR9Q1Q8NGQ5 310 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 RNF133Q8WVZ7 376 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 SPRYD4Q8WW59 207 aaPredicted RBP8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 RAB40AQ8WXH6 277 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 SGK3Q96BR1 496 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 SLAMF6Q96DU3 332 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 NEIL1Q96FI4 390 aaPredicted RBP8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 C1orf147Q96MC9 270 aaPredicted RBP8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 NIPSNAP1Q9BPW8 284 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 SSBP3Q9BWW4 388 aaPredicted RBP8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 OPA3Q9H6K4 179 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 TBC1D23Q9NUY8 699 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 ARMC1Q9NVT9 282 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 ZNF69Q9UC07 566 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 PPIAL4AQ9Y536 164 aa8.11□□□□□ -1.11
TMEM39A-210ENST00000490099 CLDN34H7C241 214 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 ZNF205O95201 554 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 PLATP00750 562 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 IFNGP01579 166 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 GYPBP06028 91 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 SPARCP09486 303 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 FCGR1AP12314 374 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 CFHR2P36980 270 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 OPRL1P41146 370 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 UBA52P62987 128 aaKnown RBP8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 CDK5Q00535 292 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 C11orf91Q3C1V1 193 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 WDR25Q64LD2 544 aaPredicted RBP8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 LYPD2Q6UXB3 125 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 LRRN1Q6UXK5 716 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 C11orf53Q8IXP5 236 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 BCL6BQ8N143 479 aaPredicted RBP8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 BPIFB2Q8N4F0 458 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 OR11L1Q8NGX0 322 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 OR2AE1Q8NHA4 323 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 GIPC3Q8TF64 312 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 CANT1Q8WVQ1 401 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 DUS3LQ96G46 650 aaKnown RBP8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 PLEKHA8Q96JA3 519 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 ZNF48Q96MX3 618 aaPredicted RBP8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 ABHD6Q9BV23 337 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 TOR3AQ9H497 397 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 FN3KRPQ9HA64 309 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 ZNF319Q9P2F9 582 aa8.1□□□□□ -1.11
TMEM39A-210ENST00000490099 RNF7Q9UBF6 113 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms