RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 ANKRD9Q96BM1 317 aaPredicted RBP16.64■□□□□ 0.25
PTPA-223ENST00000452489 DCBLD2Q96PD2 775 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 PADI1Q9ULC6 663 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 IGKV1-8A0A0C4DH67 115 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 TLCD2A6NGC4 264 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 GRM6O15303 877 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 DFFBO76075 338 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 GLIPR1P48060 266 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 SLC25A1P53007 311 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 SPOCK1Q08629 439 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 CLN3Q13286 438 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 HERPUD1Q15011 391 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 CXCL17Q6UXB2 119 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 DPY19L2P2Q6ZN68 376 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 TMEM156Q8N614 296 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 ARL14EPQ8N8R7 260 aaPredicted RBP16.64■□□□□ 0.25
PTPA-223ENST00000452489 OR2I1PQ8NGU4 316 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 FAM213BQ8TBF2 198 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 MS4A6EQ96DS6 147 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 WFDC1Q9HC57 220 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 MTCH2Q9Y6C9 303 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 HEATR5AQ86XA9 2040 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 A0A1W2PPV9 198 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 CLEC3AO75596 197 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 GNB3P16520 340 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 OR3A1P47881 315 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 ZNF774Q6NX45 483 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 ZAR1Q86SH2 424 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 LINC01555Q8NAE3 123 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 FAM46BQ96A09 425 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 XIRP2A4UGR9 3374 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 BCL6P41182 706 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 APOBEC1P41238 236 aaKnown RBP16.63■□□□□ 0.25
PTPA-223ENST00000452489 RPL29P47914 159 aaKnown RBP16.63■□□□□ 0.25
PTPA-223ENST00000452489 FLT3LGP49771 235 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 CLDN6P56747 220 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 PAX5Q02548 391 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 NFATC4Q14934 902 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 LCN10Q6JVE6 187 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 ABHD17CQ6PCB6 329 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 RTN4RL1Q86UN2 441 aaPredicted RBP16.63■□□□□ 0.25
PTPA-223ENST00000452489 ZNF429Q86V71 674 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 VN1R2Q8NFZ6 395 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 CYYR1Q96J86 154 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 FAAP24Q9BTP7 215 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 PLEKHA2Q9HB19 425 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 GPR132Q9UNW8 380 aa16.63■□□□□ 0.25
PTPA-223ENST00000452489 TP53I11O14683 189 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 SEC11BP0C7V7 166 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 FUT3P21217 361 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 ERVFC1-1P60608 527 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 GLO1Q04760 184 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 ENPP2Q13822 863 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 PCK2Q16822 640 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 OR4K15Q8NH41 348 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 RCC1LQ96I51 464 aaKnown RBP16.62■□□□□ 0.25
PTPA-223ENST00000452489 HS3ST2Q9Y278 367 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 LSM5Q9Y4Y9 91 aaKnown RBP16.62■□□□□ 0.25
PTPA-223ENST00000452489 AKT2P31751 481 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 BTG2P78543 158 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 NKAIN1Q4KMZ8 207 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 TRMT12Q53H54 448 aaKnown RBP16.62■□□□□ 0.25
PTPA-223ENST00000452489 Q6ZNB5 142 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 LRP11Q86VZ4 500 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 CMTM8Q8IZV2 173 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 ZNF248Q8NDW4 579 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 OR4D6Q8NGJ1 314 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 DHDHQ9UQ10 334 aa16.62■□□□□ 0.25
PTPA-223ENST00000452489 ZNF264O43296 627 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 SQSTM1Q13501 440 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 IAH1Q2TAA2 248 aaPredicted RBP16.61■□□□□ 0.25
PTPA-223ENST00000452489 TMEM31Q5JXX7 168 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 FCRL6Q6DN72 434 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 TMEM182Q6ZP80 229 aaPredicted RBP16.61■□□□□ 0.25
PTPA-223ENST00000452489 OR2L2Q8NH16 312 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 OVCA2Q8WZ82 227 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 PRRX2Q99811 253 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 ARV1Q9H2C2 271 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 DHRS7CA6NNS2 312 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 SOX1O00570 391 aaPredicted RBP16.61■□□□□ 0.25
PTPA-223ENST00000452489 TCF21O43680 179 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 APBB3O95704 486 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 AGR2O95994 175 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 PNPP00491 289 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 PRPS1P60891 318 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 TMEM184AQ6ZMB5 413 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 DCXRQ7Z4W1 244 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 C1orf87Q8N0U7 546 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 COX18Q8N8Q8 333 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 CPEB3Q8NE35 698 aaKnown RBP16.61■□□□□ 0.25
PTPA-223ENST00000452489 NEK7Q8TDX7 302 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 RSPRY1Q96DX4 576 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 RTBDNQ9BSG5 229 aaPredicted RBP16.61■□□□□ 0.25
PTPA-223ENST00000452489 SUSD2Q9UGT4 822 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 MRPS23Q9Y3D9 190 aaKnown RBP16.61■□□□□ 0.25
PTPA-223ENST00000452489 RFNGQ9Y644 331 aa16.61■□□□□ 0.25
PTPA-223ENST00000452489 A0A0A6YYH2 397 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 RBFOX3A6NFN3 312 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 A6NJ64 397 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 CDRT15L2A8MXV6 281 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms