RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 HOXA4Q00056 320 aaPredicted RBP14.83□□□□□ -0.04
LSM5-204ENST00000409909 SHFQ7M4L6 423 aa14.83□□□□□ -0.04
LSM5-204ENST00000409909 MUC20Q8N307 709 aaPredicted RBP14.83□□□□□ -0.04
LSM5-204ENST00000409909 DEFB108BQ8NET1 73 aa14.83□□□□□ -0.04
LSM5-204ENST00000409909 OR56B2PQ8NGI1 322 aa14.83□□□□□ -0.04
LSM5-204ENST00000409909 TMEM246Q9BRR3 403 aa14.83□□□□□ -0.04
LSM5-204ENST00000409909 ADAT1Q9BUB4 502 aaKnown RBP14.83□□□□□ -0.04
LSM5-204ENST00000409909 SLC22A4Q9H015 551 aa14.83□□□□□ -0.04
LSM5-204ENST00000409909 TOR3AQ9H497 397 aa14.83□□□□□ -0.04
LSM5-204ENST00000409909 SLC25A19Q9HC21 320 aa14.83□□□□□ -0.04
LSM5-204ENST00000409909 UFSP2Q9NUQ7 469 aa14.83□□□□□ -0.04
LSM5-204ENST00000409909 MRPL15Q9P015 296 aaKnown RBP14.83□□□□□ -0.04
LSM5-204ENST00000409909 ZNF319Q9P2F9 582 aa14.83□□□□□ -0.04
LSM5-204ENST00000409909 KLHDC2Q9Y2U9 406 aa14.83□□□□□ -0.04
LSM5-204ENST00000409909 A8MXK9 166 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 PRODHO43272 600 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 TBX1O43435 398 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 XRCC2O43543 280 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 FAM20BO75063 409 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 VENTXO95231 258 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 FSTL3O95633 263 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 PTBP3O95758 552 aaKnown RBP14.82□□□□□ -0.04
LSM5-204ENST00000409909 FSHBP01225 129 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 ANXA2P07355 339 aaKnown RBP14.82□□□□□ -0.04
LSM5-204ENST00000409909 EPHA1P21709 976 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 HSD11B1P28845 292 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 CRISP1P54107 249 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 ZNF121P58317 390 aaPredicted RBP14.82□□□□□ -0.04
LSM5-204ENST00000409909 ZNF404Q494X3 552 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 KLHL12Q53G59 568 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 RHOUQ7L0Q8 258 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 OTOSQ8NHW6 89 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 ERGIC1Q969X5 290 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 PAPOLBQ9NRJ5 636 aaKnown RBP14.82□□□□□ -0.04
LSM5-204ENST00000409909 DNAJC27Q9NZQ0 273 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 PPIAL4AQ9Y536 164 aa14.82□□□□□ -0.04
LSM5-204ENST00000409909 DOCK11Q5JSL3 2073 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 RGS9O75916 674 aaPredicted RBP14.81□□□□□ -0.04
LSM5-204ENST00000409909 NAA10P41227 235 aaPredicted RBP14.81□□□□□ -0.04
LSM5-204ENST00000409909 FAM3AP98173 230 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 ESCO2Q56NI9 601 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 FAM57BQ71RH2 274 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 SLC16A9Q7RTY1 509 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 KLBQ86Z14 1044 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 C1orf87Q8N0U7 546 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 TEX29Q8N6K0 151 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 C19orf18Q8NEA5 215 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 SEMA6DQ8NFY4 1073 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 NANPQ8TBE9 248 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 THEM6Q8WUY1 208 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 REEP6Q96HR9 211 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 PLEKHA8Q96JA3 519 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 OPA3Q9H6K4 179 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 BRD7Q9NPI1 651 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 TVP23BQ9NYZ1 205 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 LRCH1Q9Y2L9 728 aa14.81□□□□□ -0.04
LSM5-204ENST00000409909 NOP16Q9Y3C1 178 aaKnown RBP14.81□□□□□ -0.04
LSM5-204ENST00000409909 MITFO75030 526 aaPredicted RBP14.8□□□□□ -0.04
LSM5-204ENST00000409909 ATP5HO75947 161 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 LYNP07948 512 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 H2BFMP0C1H6 154 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 RPS2P15880 293 aaKnown RBP14.8□□□□□ -0.04
LSM5-204ENST00000409909 ZNF12P17014 697 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 RASSF2P50749 326 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 HCCSP53701 268 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 PAX2Q02962 417 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 ZNF154Q13106 437 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 PTGES3Q15185 160 aaKnown RBP14.8□□□□□ -0.04
LSM5-204ENST00000409909 ATP6AP1Q15904 470 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 SNAPC1Q16533 368 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 TIGD6Q17RP2 521 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 SLC35D3Q5M8T2 416 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 LYPD2Q6UXB3 125 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 PARP8Q8N3A8 854 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 ZNF454Q8N9F8 522 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 OR11L1Q8NGX0 322 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 OR5K1Q8NHB7 308 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 DNAJC9Q8WXX5 260 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 PPP1R3EQ9H7J1 279 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 FN3KRPQ9HA64 309 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 KIF17Q9P2E2 1029 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 MIOXQ9UGB7 285 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 INSIG2Q9Y5U4 225 aa14.8□□□□□ -0.04
LSM5-204ENST00000409909 A0A0A6YYJ9 748 aa14.79□□□□□ -0.04
LSM5-204ENST00000409909 hCG_38984A0A1B0GV85 526 aa14.79□□□□□ -0.04
LSM5-204ENST00000409909 APOC1P02654 83 aa14.79□□□□□ -0.04
LSM5-204ENST00000409909 IRF2P14316 349 aa14.79□□□□□ -0.04
LSM5-204ENST00000409909 CPT2P23786 658 aa14.79□□□□□ -0.04
LSM5-204ENST00000409909 EPHA2P29317 976 aa14.79□□□□□ -0.04
LSM5-204ENST00000409909 DDOSTP39656 456 aa14.79□□□□□ -0.04
LSM5-204ENST00000409909 RPS7P62081 194 aaKnown RBP14.79□□□□□ -0.04
LSM5-204ENST00000409909 SCGB2A2Q13296 93 aa14.79□□□□□ -0.04
LSM5-204ENST00000409909 APOFQ13790 326 aa14.79□□□□□ -0.04
LSM5-204ENST00000409909 PLPP7Q8NBV4 271 aa14.79□□□□□ -0.04
LSM5-204ENST00000409909 OR52H1Q8NGJ2 320 aa14.79□□□□□ -0.04
LSM5-204ENST00000409909 NEIL1Q96FI4 390 aaPredicted RBP14.79□□□□□ -0.04
LSM5-204ENST00000409909 TEAD3Q99594 435 aa14.79□□□□□ -0.04
LSM5-204ENST00000409909 SSBP3Q9BWW4 388 aaPredicted RBP14.79□□□□□ -0.04
LSM5-204ENST00000409909 TEX12Q9BXU0 123 aa14.79□□□□□ -0.04
LSM5-204ENST00000409909 SP140LQ9H930 580 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms