RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 KCNMB2Q9Y691 235 aa16.58■□□□□ 0.25
USP39-202ENST00000409025 CEACAM4O75871 244 aa16.58■□□□□ 0.24
USP39-202ENST00000409025 MT-ND4P03905 459 aa16.58■□□□□ 0.24
USP39-202ENST00000409025 TRAPPC2P0DI81 140 aa16.58■□□□□ 0.24
USP39-202ENST00000409025 TRAPPC2BP0DI82 140 aa16.58■□□□□ 0.24
USP39-202ENST00000409025 KRTAP27-1Q3LI81 207 aa16.58■□□□□ 0.24
USP39-202ENST00000409025 SFRP5Q5T4F7 317 aa16.58■□□□□ 0.24
USP39-202ENST00000409025 Q6ZSR3 168 aa16.58■□□□□ 0.24
USP39-202ENST00000409025 FGFBP3Q8TAT2 258 aa16.58■□□□□ 0.24
USP39-202ENST00000409025 CACNG6Q9BXT2 260 aa16.58■□□□□ 0.24
USP39-202ENST00000409025 MRPL15Q9P015 296 aaKnown RBP16.58■□□□□ 0.24
USP39-202ENST00000409025 MYEF2Q9P2K5 600 aaKnown RBP16.58■□□□□ 0.24
USP39-202ENST00000409025 RAB22AQ9UL26 194 aa16.58■□□□□ 0.24
USP39-202ENST00000409025 NUBP2Q9Y5Y2 271 aa16.58■□□□□ 0.24
USP39-202ENST00000409025 CNOT1A5YKK6 2376 aaKnown RBP16.58■□□□□ 0.24
USP39-202ENST00000409025 DNAJC13O75165 2243 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 A0A0A6YYH2 397 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 NAP1L6A6NFF2 107 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 A6NJ64 397 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 SLC22A20A6NK97 555 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 IGHG3P01860 377 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 ALDOBP05062 364 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 HCKP08631 526 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 MMP7P09237 267 aaPredicted RBP16.57■□□□□ 0.24
USP39-202ENST00000409025 GIFP27352 417 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 HLA-DMAP28067 261 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 BTG1P62324 171 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 SNAI3Q3KNW1 292 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 SGK3Q96BR1 496 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 C10orf35Q96D05 121 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 ANKRD20A5PA0PJZ0 165 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 METTL21EPA6NDL7 271 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 RBBP9O75884 186 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 LCATP04180 440 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 TCRBP04435 133 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 PMPCAQ10713 525 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 AWAT2Q6E213 333 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 OR10K2Q6IF99 312 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 ZNF627Q7L945 461 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 NUFIP2Q7Z417 695 aaKnown RBP16.57■□□□□ 0.24
USP39-202ENST00000409025 ANGPTL5Q86XS5 388 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 PP6455Q8WZ26 134 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 HRASLSQ9HDD0 168 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 ZNF175Q9Y473 711 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 ALG5Q9Y673 324 aa16.57■□□□□ 0.24
USP39-202ENST00000409025 H7C417 338 aa16.56■□□□□ 0.24
USP39-202ENST00000409025 FCGR2AP12318 317 aa16.56■□□□□ 0.24
USP39-202ENST00000409025 PRSS3P35030 304 aa16.56■□□□□ 0.24
USP39-202ENST00000409025 C9orf135Q5VTT2 229 aa16.56■□□□□ 0.24
USP39-202ENST00000409025 GAL3ST1Q99999 423 aa16.56■□□□□ 0.24
USP39-202ENST00000409025 GP6Q9HCN6 339 aa16.56■□□□□ 0.24
USP39-202ENST00000409025 MTFP1Q9UDX5 166 aa16.56■□□□□ 0.24
USP39-202ENST00000409025 PIGLQ9Y2B2 252 aa16.56■□□□□ 0.24
USP39-202ENST00000409025 TGM6O95932 706 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 HGFACQ04756 655 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 PABPC1L2AQ5JQF8 200 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 SPACA5Q96QH8 159 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 NUDT15Q9NV35 164 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 TAS2R8Q9NYW2 309 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 DLL1O00548 723 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 DHFRP00374 187 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 FAHP16930 419 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 CCR6P51684 374 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 RAB25P57735 213 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 FAPQ12884 760 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 RAB12Q6IQ22 244 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 UTS2BQ765I0 119 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 ZADH2Q8N4Q0 377 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 FAM46BQ96A09 425 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 REEP6Q96HR9 211 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 GPER1Q99527 375 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 CHST5Q9GZS9 411 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 FBLN5Q9UBX5 448 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 ATPIF1Q9UII2 106 aa16.55■□□□□ 0.24
USP39-202ENST00000409025 MRPS28Q9Y2Q9 187 aaKnown RBP16.55■□□□□ 0.24
USP39-202ENST00000409025 ZNF292O60281 2723 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 TRAV6A0A075B6T7 132 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 A0A096LPE4 126 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 IGKV1-9A0A0C4DH69 117 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 A0A1W2PPZ6 126 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 DHRS7CA6NNS2 312 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 SULT1C2O00338 296 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 ALX3O95076 343 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 VSIG8P0DPA2 414 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 PRF1P14222 555 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 AGTR1P30556 359 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 QRFPP83859 136 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 OLFML2AQ68BL7 652 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 P4HA3Q7Z4N8 544 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 ZNF101Q8IZC7 436 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 PAQR4Q8N4S7 273 aaPredicted RBP16.54■□□□□ 0.24
USP39-202ENST00000409025 SEMA6DQ8NFY4 1073 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 OR6F1Q8NGZ6 308 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 DEDD2Q8WXF8 326 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 ITFG2Q969R8 447 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 PRDM14Q9GZV8 571 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 ZNF391Q9UJN7 358 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 ZNF221Q9UK13 617 aa16.54■□□□□ 0.24
USP39-202ENST00000409025 MUC6Q6W4X9 2439 aa16.53■□□□□ 0.24
USP39-202ENST00000409025 EFSO43281 561 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms