RNA–Protein interactions for RNA: ENST00000358309.3

CX3CR1-201, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 2 BASIC

Gene CX3CR1, Length 3,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-201ENST00000358309 SOCS1O15524 211 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 HRGP04196 525 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 UQCRC1P31930 480 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 ASCL1P50553 236 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 DAP3P51398 398 aaKnown RBP5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 DSCR4P56555 118 aaPredicted RBP5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 SEC61A1P61619 476 aaKnown RBP5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 SELENBP1Q13228 472 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 THEM4Q5T1C6 240 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 PLCXD3Q63HM9 321 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 C9orf43Q8TAL5 461 aaPredicted RBP5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 ZNF420Q8TAQ5 688 aaPredicted RBP5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 GTF3AQ92664 365 aaKnown RBP5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 APH1AQ96BI3 265 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 SMIM19Q96E16 107 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 FER1L6-AS2Q96M78 137 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 FOXB1Q99853 325 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 RAB33BQ9H082 229 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 PARP12Q9H0J9 701 aaKnown RBP5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 CNTD2Q9H8S5 307 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 CRNNQ9UBG3 495 aaPredicted RBP5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 NXT1Q9UKK6 140 aaKnown RBP5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 MCTS1Q9ULC4 181 aaKnown RBP5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 PEX16Q9Y5Y5 336 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 GMEB1Q9Y692 573 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 HSPE1-MOB4S4R3N1 261 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 BSNQ9UPA5 3926 aa5.49□□□□□ -1.53
CX3CR1-201ENST00000358309 SOX15O60248 233 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 HTR2CP28335 458 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 NPY4RP50391 375 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 DEFA1P59665 94 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 DEFA3P59666 94 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 PSPHP78330 225 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 SLC35A1P78382 337 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 MRPL49Q13405 166 aaKnown RBP5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 SNTB2Q13425 540 aaKnown RBP5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 SLC9A3R2Q15599 337 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 SP6Q3SY56 376 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 C6orf183Q5T699 404 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 METTL11BQ5VVY1 283 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 ZNF782Q6ZMW2 699 aaPredicted RBP5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 SLC25A26Q70HW3 274 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 CPEB3Q8NE35 698 aaKnown RBP5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 OR51T1Q8NGJ9 327 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 OR1J2Q8NGS2 313 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 MRGPRX4Q96LA9 322 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 PPA2Q9H2U2 334 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 OBP2BQ9NPH6 170 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 OR5V1Q9UGF6 321 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 ST6GALNAC2Q9UJ37 374 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 MOKQ9UQ07 419 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 SF3B6Q9Y3B4 125 aaKnown RBP5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 IGHV3OR15-7A0A075B7D8 119 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 FTCDNL1E5RQL4 147 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 LYNX1G3V0Z9 82 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 KLRC4-KLRK1H3BQV0 150 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 SPRY3O43610 288 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 UPK1BO75841 260 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 SCGB1D2O95969 90 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 CSTBP04080 98 aaKnown RBP5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 CD3DP04234 171 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 LYNX1P0DP58 116 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 JUNBP17275 347 aaPredicted RBP5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 ACKR3P25106 362 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 GRNP28799 593 aaKnown RBP5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 CRABP1P29762 137 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 KIR2DL3P43628 341 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 NPBWR2P48146 333 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 PITPNBP48739 271 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 ZNF84P51523 738 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 PSG4Q00888 419 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 ZNF92Q03936 586 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 FAM205BPQ63HN1 556 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 HAGHLQ6PII5 290 aaPredicted RBP5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 ZNF679Q8IYX0 411 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 ZNF610Q8N9Z0 462 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 NOXO1Q8NFA2 376 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 PAQR8Q8TEZ7 354 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 SLAMF9Q96A28 289 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 FAM3DQ96BQ1 224 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 CITED4Q96RK1 184 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 CACNG6Q9BXT2 260 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 RNF150Q9ULK6 438 aa5.48□□□□□ -1.53
CX3CR1-201ENST00000358309 IGLV1-36A0A0B4J1U3 117 aa5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 A0A1W2PPE3 182 aa5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 HTR3EA5X5Y0 456 aa5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 OR4C45A6NMZ5 311 aa5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 F8VVB4 439 aa5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 F8VWA3 439 aa5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 SIGLEC5O15389 551 aa5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 SLC43A1O75387 559 aa5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 ZNF93P35789 620 aaPredicted RBP5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 GDNFP39905 211 aa5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 HAAOP46952 286 aa5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 ARFIP1P53367 373 aa5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 UBE2NP61088 152 aaKnown RBP5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 RPS11P62280 158 aaKnown RBP eCLIP5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 AIMP2Q13155 320 aaKnown RBP5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 Q499Y3 187 aa5.47□□□□□ -1.53
CX3CR1-201ENST00000358309 AKIRIN2Q53H80 203 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms