RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 OR6K3Q8NGY3 331 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 C10orf35Q96D05 121 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 SLC25A38Q96DW6 304 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 ZNF391Q9UJN7 358 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 V9GYS6 101 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 A0A1W2PQ09 198 aa15.81■□□□□ 0.12
VIM-201ENST00000224237 SULT1B1O43704 296 aa15.81■□□□□ 0.12
VIM-201ENST00000224237 LCATP04180 440 aa15.81■□□□□ 0.12
VIM-201ENST00000224237 ART1P52961 327 aa15.81■□□□□ 0.12
VIM-201ENST00000224237 PITPNAQ00169 270 aa15.81■□□□□ 0.12
VIM-201ENST00000224237 GLYATL3Q5SZD4 288 aa15.81■□□□□ 0.12
VIM-201ENST00000224237 TMEM53Q6P2H8 277 aa15.81■□□□□ 0.12
VIM-201ENST00000224237 JAGN1Q8N5M9 183 aa15.81■□□□□ 0.12
VIM-201ENST00000224237 CNEP1R1Q8N9A8 125 aa15.81■□□□□ 0.12
VIM-201ENST00000224237 CPEB3Q8NE35 698 aaKnown RBP15.81■□□□□ 0.12
VIM-201ENST00000224237 OR13C9Q8NGT0 318 aa15.81■□□□□ 0.12
VIM-201ENST00000224237 SYNPRQ8TBG9 265 aa15.81■□□□□ 0.12
VIM-201ENST00000224237 NANOS1Q8WY41 292 aaKnown RBP15.81■□□□□ 0.12
VIM-201ENST00000224237 ITPKCQ96DU7 683 aa15.81■□□□□ 0.12
VIM-201ENST00000224237 SORCS2Q96PQ0 1159 aa15.81■□□□□ 0.12
VIM-201ENST00000224237 RTTNQ86VV8 2226 aa15.81■□□□□ 0.12
VIM-201ENST00000224237 DSPP15924 2871 aaKnown RBP15.81■□□□□ 0.12
VIM-201ENST00000224237 DHRS7CA6NNS2 312 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 WDR1O75083 606 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 HLA-DQB1P01920 261 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 CD79AP11912 226 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 PTGER4P35408 488 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 POU3F4P49335 361 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 TGFBR3Q03167 851 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 OR51D1Q8NGF3 324 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 FAM3DQ96BQ1 224 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 HAVCR1Q96D42 359 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 S100A16Q96FQ6 103 aaKnown RBP15.8■□□□□ 0.12
VIM-201ENST00000224237 RGCCQ9H4X1 137 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 CGGBP1Q9UFW8 167 aaPredicted RBP15.8■□□□□ 0.12
VIM-201ENST00000224237 TBC1D24Q9ULP9 559 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 DOCK7Q96N67 2140 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 LOC100289279A0A1B0GTE1 492 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 MBD3L4A6NDZ8 208 aaPredicted RBP15.8■□□□□ 0.12
VIM-201ENST00000224237 MBD3L3A6NE82 208 aaPredicted RBP15.8■□□□□ 0.12
VIM-201ENST00000224237 MBD3L5A6NJ08 208 aaPredicted RBP15.8■□□□□ 0.12
VIM-201ENST00000224237 THBS4P35443 961 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 KIR2DL2P43627 348 aaPredicted RBP15.8■□□□□ 0.12
VIM-201ENST00000224237 CAPZA1P52907 286 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 RAB1AP62820 205 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 C1orf100Q5SVJ3 147 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 Q6ZT83 130 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 LYPD6Q86Y78 171 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 DTX3Q8N9I9 347 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 C19orf18Q8NEA5 215 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 MBD3L2Q8NHZ7 208 aaPredicted RBP15.8■□□□□ 0.12
VIM-201ENST00000224237 BCL2L2Q92843 193 aaPredicted RBP15.8■□□□□ 0.12
VIM-201ENST00000224237 SLC25A28Q96A46 364 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 SGK3Q96BR1 496 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 REEP6Q96HR9 211 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 UQCC2Q9BRT2 126 aa15.8■□□□□ 0.12
VIM-201ENST00000224237 METTL17Q9H7H0 456 aaPredicted RBP15.8■□□□□ 0.12
VIM-201ENST00000224237 ZNF503-AS2A6NEH8 195 aa15.79■□□□□ 0.12
VIM-201ENST00000224237 FIGNL2A6NMB9 653 aa15.79■□□□□ 0.12
VIM-201ENST00000224237 TPOP07202 933 aa15.79■□□□□ 0.12
VIM-201ENST00000224237 ARSBP15848 533 aa15.79■□□□□ 0.12
VIM-201ENST00000224237 PLP2Q04941 152 aa15.79■□□□□ 0.12
VIM-201ENST00000224237 GTF3C1Q12789 2109 aa15.79■□□□□ 0.12
VIM-201ENST00000224237 GDPD3Q7L5L3 318 aa15.79■□□□□ 0.12
VIM-201ENST00000224237 Q8NA96 180 aa15.79■□□□□ 0.12
VIM-201ENST00000224237 OR52N4Q8NGI2 321 aa15.79■□□□□ 0.12
VIM-201ENST00000224237 PP6455Q8WZ26 134 aa15.79■□□□□ 0.12
VIM-201ENST00000224237 ABHD1Q96SE0 405 aa15.79■□□□□ 0.12
VIM-201ENST00000224237 TLN1Q9Y490 2541 aaKnown RBP15.78■□□□□ 0.12
VIM-201ENST00000224237 PER3P56645 1201 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 C2orf76Q3KRA6 126 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 HIKESHIQ53FT3 197 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 ZNF324BQ6AW86 544 aaPredicted RBP15.78■□□□□ 0.12
VIM-201ENST00000224237 CDH26Q8IXH8 852 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 C1QTNF5Q9BXJ0 243 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 NOX3Q9HBY0 568 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 XRCC2O43543 280 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 IGHV1-2P23083 117 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 STOMP27105 288 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 MMP15P51511 669 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 TAB1Q15750 504 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 GSG1Q2KHT4 349 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 TBRG1Q3YBR2 411 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 VWA1Q6PCB0 445 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 SEMA6DQ8NFY4 1073 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 OR2AE1Q8NHA4 323 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 NKX3-1Q99801 234 aaPredicted RBP15.78■□□□□ 0.12
VIM-201ENST00000224237 CHST5Q9GZS9 411 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 PIGLQ9Y2B2 252 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 MRPS7Q9Y2R9 242 aaKnown RBP15.78■□□□□ 0.12
VIM-201ENST00000224237 RHBDD3Q9Y3P4 386 aa15.78■□□□□ 0.12
VIM-201ENST00000224237 LOC100509620A0A075B734 347 aa15.77■□□□□ 0.11
VIM-201ENST00000224237 BOLA2-SMG1P6H3BVE0 249 aa15.77■□□□□ 0.11
VIM-201ENST00000224237 CTDSPLO15194 276 aa15.77■□□□□ 0.11
VIM-201ENST00000224237 ZNF93P35789 620 aaPredicted RBP15.77■□□□□ 0.11
VIM-201ENST00000224237 INPP1P49441 399 aa15.77■□□□□ 0.11
VIM-201ENST00000224237 ASAH1Q13510 395 aa15.77■□□□□ 0.11
VIM-201ENST00000224237 EIF2S3LQ2VIR3 472 aaKnown RBP15.77■□□□□ 0.11
VIM-201ENST00000224237 LINC00303Q3SY05 128 aa15.77■□□□□ 0.11
VIM-201ENST00000224237 CCBE1Q6UXH8 406 aaPredicted RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms