RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ACHEP22303 614 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 TNFSF10P50591 281 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 RRADP55042 308 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 PSMA6P60900 246 aaKnown RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 PSG4Q00888 419 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 CD83Q01151 205 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 HGFACQ04756 655 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 MRPL28Q13084 256 aaKnown RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 CBX3Q13185 183 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 CLN3Q13286 438 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ASAH1Q13510 395 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 SLC36A2Q495M3 483 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ELFN2Q5R3F8 820 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 PDSS1Q5T2R2 415 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 GLT8D1Q68CQ7 371 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 FDX2Q6P4F2 183 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ANGPTL5Q86XS5 388 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ZNF100Q8IYN0 542 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ZNF101Q8IZC7 436 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 PNPLA2Q96AD5 504 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ZNF799Q96GE5 643 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 LYZL4Q96KX0 146 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 IP6K3Q96PC2 410 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 KCNJ15Q99712 375 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 TP63Q9H3D4 680 aaPredicted RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 GPR35Q9HC97 309 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 RYDENQ9NUL5 291 aaKnown RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 NUDT15Q9NV35 164 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 TBCCD1Q9NVR7 557 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 PAQR5Q9NXK6 330 aaPredicted RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 PRSS50Q9UI38 385 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 MCTS1Q9ULC4 181 aaKnown RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 FOXJ3Q9UPW0 622 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 NCOR2Q9Y618 2525 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ROS1P08922 2347 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 RELNP78509 3460 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 LOC100509620A0A075B734 347 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 IGHV3-64DA0A0J9YX35 117 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 LOC102725191A0A1B0GVB3 256 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 C3orf80F5H4A9 247 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 SMLR1H3BR10 107 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ACOT7O00154 380 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 CYTIPO60759 359 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 LRP3O75074 770 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 HPNP05981 417 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 UBCP0CG48 685 aaKnown RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 ZNF708P17019 499 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 BDKRB2P30411 391 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 EIF2S3P41091 472 aaKnown RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 NBL1P41271 181 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 NR4A2P43354 598 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 OR3A4PP47883 348 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 PTH2RP49190 550 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 TAS2R20P59543 309 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 CDC20Q12834 499 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 SNTB2Q13425 540 aaKnown RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 IGFBP7Q16270 282 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 TATDN3Q17R31 274 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 SLC22A6Q4U2R8 563 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 MZT2BQ6NZ67 158 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 DEGS2Q6QHC5 323 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 SLC22A24Q8N4F4 322 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 CNEP1R1Q8N9A8 125 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 MINDY2Q8NBR6 621 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 OR1M1Q8NGA1 313 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 OR5D14Q8NGL3 314 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 PHYHIPQ92561 330 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 HAS2Q92819 552 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 TRIM63Q969Q1 353 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 MS4A3Q96HJ5 214 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ZCCHC4Q9H5U6 513 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 NIPAL2Q9H841 368 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 GPR173Q9NS66 373 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 TMEM38BQ9NVV0 291 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 RBFOX1Q9NWB1 397 aaKnown RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 PIGLQ9Y2B2 252 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 CACNG2Q9Y698 323 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 TNRC6AQ8NDV7 1962 aaKnown RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 FAM230AA0A1W2PPH8 454 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ZNF503-AS2A6NEH8 195 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 TMEM235A6NFC5 223 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 INMT-MINDY4F8WBC2 141 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 SLC17A2O00624 439 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 CTAG2O75638 210 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 MPIG6BO95866 241 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 RAB3AP20336 220 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ZNF93P35789 620 aaPredicted RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 VEGFCP49767 419 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 LSM6P62312 80 aaKnown RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 PDCD1Q15116 288 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 POU4F3Q15319 338 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 TBRG1Q3YBR2 411 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 HIKESHIQ53FT3 197 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 PABPC1L2AQ5JQF8 200 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 C10orf128Q5T292 105 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 FAM27BQ5VT28 67 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 AWAT2Q6E213 333 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ABLIM2Q6H8Q1 611 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 P4HA3Q7Z4N8 544 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 C1QL2Q7Z5L3 287 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms